RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 SPEF2Q9C093 1822 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 TRIOBPQ9H2D6 2365 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 CREB3L3Q68CJ9 461 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 OTUD7BQ6GQQ9 843 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 BLOC1S2Q6QNY1 142 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 MTMR14Q8NCE2 650 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 ENGASEQ8NFI3 743 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 FAM71BQ8TC56 605 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 XPO4Q9C0E2 1151 aaKnown RBP11.51□□□□□ -0.57
APTX-216ENST00000472896 GBP3Q9H0R5 595 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 F8W031 263 aaPredicted RBP11.5□□□□□ -0.57
APTX-216ENST00000472896 H3BQF6 201 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 RPS6KB1P23443 525 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 PTH1RQ03431 593 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 SUPT20HL1Q3ZLR7 823 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 CFAP100Q494V2 611 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 CEP120Q8N960 986 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 CXorf56Q9H5V9 222 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 CENPFP49454 3210 aa11.5□□□□□ -0.57
APTX-216ENST00000472896 IRS2Q9Y4H2 1338 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 UNCXA6NJT0 531 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 F6X3S4 739 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 IKBKBO14920 756 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 ARHGAP6O43182 974 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 GNL2Q13823 731 aaKnown RBP11.49□□□□□ -0.57
APTX-216ENST00000472896 NAA16Q6N069 864 aaPredicted RBP11.49□□□□□ -0.57
APTX-216ENST00000472896 BANK1Q8NDB2 785 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 BRI3BPQ8WY22 251 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 MAP4K1Q92918 833 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 LLPHQ9BRT6 129 aaKnown RBP11.49□□□□□ -0.57
APTX-216ENST00000472896 ELP3Q9H9T3 547 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 IL1RAPL2Q9NP60 686 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 MED4Q9NPJ6 270 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 HMG20BQ9P0W2 317 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 VPS18Q9P253 973 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 RAB21Q9UL25 225 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 PPP2R3BQ9Y5P8 575 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 LAMB1P07942 1786 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 COL1A1P02452 1464 aaPredicted RBP11.49□□□□□ -0.57
APTX-216ENST00000472896 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 H3BQV1 296 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 H7C1W4 665 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 PPFIA4O75335 1185 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 UBTFL1P0CB47 393 aaPredicted RBP11.49□□□□□ -0.57
APTX-216ENST00000472896 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 IREB2P48200 963 aaKnown RBP11.49□□□□□ -0.57
APTX-216ENST00000472896 RASA3Q14644 834 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 CWF19L2Q2TBE0 894 aaKnown RBP11.49□□□□□ -0.57
APTX-216ENST00000472896 SLC9C1Q4G0N8 1177 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 CHRDL2Q6WN34 429 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 G2E3Q7L622 706 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 TADA2BQ86TJ2 420 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 CDAN1Q8IWY9 1227 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 ANKRD13AQ8IZ07 590 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 SH3TC2Q8TF17 1288 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 CHMP4CQ96CF2 233 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 EVI5LQ96CN4 794 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 OPTNQ96CV9 577 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 GPATCH3Q96I76 525 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 ARHGAP39Q9C0H5 1083 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 VEZTQ9HBM0 779 aa11.49□□□□□ -0.57
APTX-216ENST00000472896 RBM8AQ9Y5S9 174 aaKnown RBP11.49□□□□□ -0.57
APTX-216ENST00000472896 A0A1W2PQ27 194 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 A0A1W2PQ64 194 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 A0A1W2PQD8 194 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 PI4KAP2A4QPH2 592 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 DLL1O00548 723 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 SURF6O75683 361 aaKnown RBP11.48□□□□□ -0.57
APTX-216ENST00000472896 MAP4K4O95819 1239 aaPredicted RBP11.48□□□□□ -0.57
APTX-216ENST00000472896 IGHMBP2P38935 993 aaKnown RBP11.48□□□□□ -0.57
APTX-216ENST00000472896 CHRNDQ07001 517 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 TRDNQ13061 729 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 KRT32Q14532 448 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 CCDC30Q5VVM6 783 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 KSR2Q6VAB6 950 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.48□□□□□ -0.57
APTX-216ENST00000472896 ERC1Q8IUD2 1116 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 CEP112Q8N8E3 955 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 PI4KAP1Q8N8J0 262 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 MSANTD4Q8NCY6 345 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 HELBQ8NG08 1087 aaPredicted RBP11.48□□□□□ -0.57
APTX-216ENST00000472896 ANKRD2Q9GZV1 360 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 BCCIPQ9P287 314 aaKnown RBP eCLIP11.48□□□□□ -0.57
APTX-216ENST00000472896 JAG2Q9Y219 1238 aa11.48□□□□□ -0.57
APTX-216ENST00000472896 CEP290O15078 2479 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 VWA3AA6NCI4 1184 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 SLC27A2O14975 620 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 TAF5LO75529 589 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 ITGA6P23229 1130 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 NLRP12P59046 1061 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 FLIIQ13045 1269 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 HSP90B2PQ58FF3 399 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 DNAJC21Q5F1R6 531 aaKnown RBP11.47□□□□□ -0.57
APTX-216ENST00000472896 BEND6Q5SZJ8 279 aaPredicted RBP11.47□□□□□ -0.57
APTX-216ENST00000472896 UBE3BQ7Z3V4 1068 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 GPATCH11Q8N954 259 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 ANKRD20A12PQ8NF67 263 aa11.47□□□□□ -0.57
APTX-216ENST00000472896 ERCC4Q92889 916 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms