RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DLL3Q9NYJ7 618 aa14.11□□□□□ -0.15
RTN4-211ENST00000438462 SCN5AQ14524 2016 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 KIF28PB7ZC32 967 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 C19orf81C9J6K1 198 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 AKR1A1P14550 325 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 PRDX5P30044 214 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 PPP2R1AP30153 589 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 ZEB1P37275 1124 aaPredicted RBP14.1□□□□□ -0.15
RTN4-211ENST00000438462 SIGLEC14Q08ET2 396 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 NBPF20Q3BBV1 942 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 KSR2Q6VAB6 950 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 KLHDC9Q8NEP7 349 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 VTI1AQ96AJ9 217 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 ASIC4Q96FT7 647 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 MAML3Q96JK9 1138 aa14.1□□□□□ -0.15
RTN4-211ENST00000438462 WDR87Q6ZQQ6 2873 aa14.09□□□□□ -0.15
RTN4-211ENST00000438462 TAL1P17542 331 aaPredicted RBP14.09□□□□□ -0.15
RTN4-211ENST00000438462 SMAD2Q15796 467 aaKnown RBP14.09□□□□□ -0.15
RTN4-211ENST00000438462 NOC4LQ9BVI4 516 aaKnown RBP14.09□□□□□ -0.15
RTN4-211ENST00000438462 NRBP1Q9UHY1 535 aa14.09□□□□□ -0.15
RTN4-211ENST00000438462 USP17L10C9JJH3 530 aa14.08□□□□□ -0.16
RTN4-211ENST00000438462 LMOD3Q0VAK6 560 aa14.08□□□□□ -0.16
RTN4-211ENST00000438462 PHOSPHO2Q8TCD6 241 aa14.08□□□□□ -0.16
RTN4-211ENST00000438462 PABPC5Q96DU9 382 aaKnown RBP14.08□□□□□ -0.16
RTN4-211ENST00000438462 CHAMP1Q96JM3 812 aa14.08□□□□□ -0.16
RTN4-211ENST00000438462 SLC5A4Q9NY91 659 aa14.08□□□□□ -0.16
RTN4-211ENST00000438462 SIPA1L1O43166 1804 aa14.07□□□□□ -0.16
RTN4-211ENST00000438462 ASGR1P07306 291 aa14.07□□□□□ -0.16
RTN4-211ENST00000438462 IRX5P78411 483 aaPredicted RBP14.07□□□□□ -0.16
RTN4-211ENST00000438462 FOXO4P98177 505 aa14.07□□□□□ -0.16
RTN4-211ENST00000438462 CCDC57Q2TAC2 916 aa14.07□□□□□ -0.16
RTN4-211ENST00000438462 EMILIN3Q9NT22 766 aa14.07□□□□□ -0.16
RTN4-211ENST00000438462 STXBP3O00186 592 aa14.06□□□□□ -0.16
RTN4-211ENST00000438462 STRNO43815 780 aa14.06□□□□□ -0.16
RTN4-211ENST00000438462 PDGFBP01127 241 aaPredicted RBP14.06□□□□□ -0.16
RTN4-211ENST00000438462 PFKMP08237 780 aa14.06□□□□□ -0.16
RTN4-211ENST00000438462 CLUL1Q15846 466 aa14.06□□□□□ -0.16
RTN4-211ENST00000438462 DEFB128Q7Z7B8 93 aa14.06□□□□□ -0.16
RTN4-211ENST00000438462 WDR66Q8TBY9 1149 aa14.06□□□□□ -0.16
RTN4-211ENST00000438462 CDK5RAP2Q96SN8 1893 aa14.06□□□□□ -0.16
RTN4-211ENST00000438462 ZNF865P0CJ78 1059 aaPredicted RBP14.05□□□□□ -0.16
RTN4-211ENST00000438462 ACTN1P12814 892 aa14.05□□□□□ -0.16
RTN4-211ENST00000438462 SHROOM1Q2M3G4 852 aaPredicted RBP14.05□□□□□ -0.16
RTN4-211ENST00000438462 MOV10L1Q9BXT6 1211 aaKnown RBP14.05□□□□□ -0.16
RTN4-211ENST00000438462 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
RTN4-211ENST00000438462 CLDND1Q9NY35 253 aa14.05□□□□□ -0.16
RTN4-211ENST00000438462 ASPMQ8IZT6 3477 aa14.05□□□□□ -0.16
RTN4-211ENST00000438462 CEP250Q9BV73 2442 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 USP17L15C9J2P7 530 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 USP17L13C9JLJ4 530 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 USP17L11C9JVI0 530 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 USP17L18D6R9N7 530 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 USP17L22D6RA61 530 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 USP17L17D6RBQ6 530 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 USP17L19D6RCP7 530 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 USP17L20D6RJB6 530 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 MBTPS2O43462 519 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 LDHBP07195 334 aaKnown RBP14.04□□□□□ -0.16
RTN4-211ENST00000438462 C6orf222P0C671 652 aaPredicted RBP14.04□□□□□ -0.16
RTN4-211ENST00000438462 CST5P28325 142 aaPredicted RBP14.04□□□□□ -0.16
RTN4-211ENST00000438462 JAG1P78504 1218 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 USP17L24Q0WX57 530 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 LMBR1LQ6UX01 489 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 LBX2Q6XYB7 198 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 AGBL1Q96MI9 1066 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 UNC79Q9P2D8 2635 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 TANC1Q9C0D5 1861 aa14.04□□□□□ -0.16
RTN4-211ENST00000438462 ZNFX1Q9P2E3 1918 aaKnown RBP14.03□□□□□ -0.16
RTN4-211ENST00000438462 SPDYE16A6NNV3 312 aaPredicted RBP14.03□□□□□ -0.16
RTN4-211ENST00000438462 ASNSP08243 561 aa14.03□□□□□ -0.16
RTN4-211ENST00000438462 ERCC3P19447 782 aa14.03□□□□□ -0.16
RTN4-211ENST00000438462 ERVK-21P61565 698 aa14.03□□□□□ -0.16
RTN4-211ENST00000438462 COL19A1Q14993 1142 aa14.03□□□□□ -0.16
RTN4-211ENST00000438462 ZYXQ15942 572 aaKnown RBP14.03□□□□□ -0.16
RTN4-211ENST00000438462 TIGD5Q53EQ6 642 aa14.03□□□□□ -0.16
RTN4-211ENST00000438462 USP17L2Q6R6M4 530 aa14.03□□□□□ -0.16
RTN4-211ENST00000438462 PCSK9Q8NBP7 692 aaKnown RBP14.03□□□□□ -0.16
RTN4-211ENST00000438462 CDCA7LQ96GN5 454 aa14.03□□□□□ -0.16
RTN4-211ENST00000438462 TGS1Q96RS0 853 aaKnown RBP14.03□□□□□ -0.16
RTN4-211ENST00000438462 DACH1Q9UI36 760 aa14.03□□□□□ -0.16
RTN4-211ENST00000438462 FRYLO94915 3013 aa14.02□□□□□ -0.16
RTN4-211ENST00000438462 EP300Q09472 2414 aaPredicted RBP14.02□□□□□ -0.16
RTN4-211ENST00000438462 ELL2O00472 640 aaPredicted RBP14.02□□□□□ -0.17
RTN4-211ENST00000438462 TMPOP42166 694 aaKnown RBP14.02□□□□□ -0.17
RTN4-211ENST00000438462 RSPO4Q2I0M5 234 aaPredicted RBP14.02□□□□□ -0.17
RTN4-211ENST00000438462 TCEAL5Q5H9L2 206 aa14.02□□□□□ -0.17
RTN4-211ENST00000438462 TMCO2Q7Z6W1 182 aaPredicted RBP14.02□□□□□ -0.17
RTN4-211ENST00000438462 TMEM105Q8N8V8 129 aa14.02□□□□□ -0.17
RTN4-211ENST00000438462 MRPL38Q96DV4 380 aaKnown RBP14.02□□□□□ -0.17
RTN4-211ENST00000438462 PNNQ9H307 717 aaKnown RBP14.02□□□□□ -0.17
RTN4-211ENST00000438462 MYH16Q9H6N6 1097 aa14.02□□□□□ -0.17
RTN4-211ENST00000438462 SPTBN2O15020 2390 aa14.02□□□□□ -0.17
RTN4-211ENST00000438462 MROH5Q6ZUA9 1318 aa14.01□□□□□ -0.17
RTN4-211ENST00000438462 CLSPNQ9HAW4 1339 aa14.01□□□□□ -0.17
RTN4-211ENST00000438462 B4GALT4O60513 344 aa14.01□□□□□ -0.17
RTN4-211ENST00000438462 ZIC2O95409 532 aaPredicted RBP14.01□□□□□ -0.17
RTN4-211ENST00000438462 LTBRP36941 435 aa14.01□□□□□ -0.17
RTN4-211ENST00000438462 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
RTN4-211ENST00000438462 CATSPERGQ6ZRH7 1159 aa14.01□□□□□ -0.17
RTN4-211ENST00000438462 RPAINQ86UA6 219 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms