RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NUCB2P80303 420 aa26.7■■□□□ 1.87
CPSF4-204ENST00000436336 VGLL4Q14135 290 aa26.7■■□□□ 1.87
CPSF4-204ENST00000436336 LARP1BQ659C4 914 aaKnown RBP26.7■■□□□ 1.87
CPSF4-204ENST00000436336 CHADLQ6NUI6 762 aa26.7■■□□□ 1.87
CPSF4-204ENST00000436336 ANKRD13AQ8IZ07 590 aa26.7■■□□□ 1.87
CPSF4-204ENST00000436336 GPBP1L1Q9HC44 474 aaPredicted RBP26.7■■□□□ 1.87
CPSF4-204ENST00000436336 SNCAIPQ9Y6H5 919 aa26.7■■□□□ 1.87
CPSF4-204ENST00000436336 FRMPD2Q68DX3 1309 aaPredicted RBP26.7■■□□□ 1.86
CPSF4-204ENST00000436336 PRPF3O43395 683 aaKnown RBP26.7■■□□□ 1.86
CPSF4-204ENST00000436336 SYT1P21579 422 aa26.7■■□□□ 1.86
CPSF4-204ENST00000436336 CCDC96Q2M329 555 aa26.7■■□□□ 1.86
CPSF4-204ENST00000436336 FEZ1Q99689 392 aa26.7■■□□□ 1.86
CPSF4-204ENST00000436336 PTPRFP10586 1907 aa26.7■■□□□ 1.86
CPSF4-204ENST00000436336 DEXIO95424 95 aa26.69■■□□□ 1.86
CPSF4-204ENST00000436336 AKAP17AQ02040 695 aaKnown RBP26.69■■□□□ 1.86
CPSF4-204ENST00000436336 WASF1Q92558 559 aa26.69■■□□□ 1.86
CPSF4-204ENST00000436336 SPZ1Q9BXG8 430 aa26.69■■□□□ 1.86
CPSF4-204ENST00000436336 KIAA1683Q9H0B3 1180 aa26.69■■□□□ 1.86
CPSF4-204ENST00000436336 USP17L10C9JJH3 530 aa26.68■■□□□ 1.86
CPSF4-204ENST00000436336 ZNF280CQ8ND82 737 aa26.68■■□□□ 1.86
CPSF4-204ENST00000436336 RBM27Q9P2N5 1060 aaKnown RBP26.68■■□□□ 1.86
CPSF4-204ENST00000436336 STX6O43752 255 aa26.68■■□□□ 1.86
CPSF4-204ENST00000436336 ZNF408Q9H9D4 720 aa26.68■■□□□ 1.86
CPSF4-204ENST00000436336 GPCPD1Q9NPB8 672 aa26.68■■□□□ 1.86
CPSF4-204ENST00000436336 ZHX2Q9Y6X8 837 aa26.68■■□□□ 1.86
CPSF4-204ENST00000436336 BMP3P12645 472 aa26.67■■□□□ 1.86
CPSF4-204ENST00000436336 USP14P54578 494 aa26.67■■□□□ 1.86
CPSF4-204ENST00000436336 FKBP1BP68106 108 aa26.67■■□□□ 1.86
CPSF4-204ENST00000436336 FMR1Q06787 632 aaKnown RBP eCLIP26.67■■□□□ 1.86
CPSF4-204ENST00000436336 MOB2Q70IA6 237 aa26.67■■□□□ 1.86
CPSF4-204ENST00000436336 KCTD1Q719H9 257 aa26.67■■□□□ 1.86
CPSF4-204ENST00000436336 V9GY48 417 aaPredicted RBP26.67■■□□□ 1.86
CPSF4-204ENST00000436336 UNCXA6NJT0 531 aa26.66■■□□□ 1.86
CPSF4-204ENST00000436336 CYTH3O43739 400 aa26.66■■□□□ 1.86
CPSF4-204ENST00000436336 SPP2Q13103 211 aa26.66■■□□□ 1.86
CPSF4-204ENST00000436336 ZYXQ15942 572 aaKnown RBP26.66■■□□□ 1.86
CPSF4-204ENST00000436336 LPAR1Q92633 364 aa26.66■■□□□ 1.86
CPSF4-204ENST00000436336 RIOX1Q9H6W3 641 aa26.66■■□□□ 1.86
CPSF4-204ENST00000436336 ITGBL1O95965 494 aaPredicted RBP26.65■■□□□ 1.86
CPSF4-204ENST00000436336 PKP1Q13835 747 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 KIAA1755Q5JYT7 1200 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 SPICE1Q8N0Z3 855 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 RGS22Q8NE09 1264 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 ALG1Q9BT22 464 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 WDR33Q9C0J8 1336 aaKnown RBP26.65■■□□□ 1.86
CPSF4-204ENST00000436336 BACE1P56817 501 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 MTMR2Q13614 643 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 SLC35G1Q2M3R5 365 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 LDLRAD1Q5T700 205 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 UBA5Q9GZZ9 404 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 ISY1Q9ULR0 285 aaKnown RBP26.65■■□□□ 1.86
CPSF4-204ENST00000436336 AFG3L2Q9Y4W6 797 aa26.65■■□□□ 1.86
CPSF4-204ENST00000436336 C19orf81C9J6K1 198 aa26.64■■□□□ 1.85
CPSF4-204ENST00000436336 BRD1O95696 1058 aa26.64■■□□□ 1.85
CPSF4-204ENST00000436336 PKN1Q16512 942 aa26.64■■□□□ 1.85
CPSF4-204ENST00000436336 TTBK2Q6IQ55 1244 aa26.64■■□□□ 1.85
CPSF4-204ENST00000436336 NUP88Q99567 741 aaPredicted RBP26.64■■□□□ 1.85
CPSF4-204ENST00000436336 CPVLQ9H3G5 476 aa26.64■■□□□ 1.85
CPSF4-204ENST00000436336 UBE2Q2LH0YL09 131 aa26.63■■□□□ 1.85
CPSF4-204ENST00000436336 ERO1BQ86YB8 467 aa26.63■■□□□ 1.85
CPSF4-204ENST00000436336 C8orf76Q96K31 380 aa26.63■■□□□ 1.85
CPSF4-204ENST00000436336 ELP3Q9H9T3 547 aa26.63■■□□□ 1.85
CPSF4-204ENST00000436336 GBA2Q9HCG7 927 aaPredicted RBP26.63■■□□□ 1.85
CPSF4-204ENST00000436336 PARP14Q460N5 1801 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 TRIM75PA6NK02 468 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 H3BQV1 296 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 CELF2O95319 508 aaKnown RBP26.62■■□□□ 1.85
CPSF4-204ENST00000436336 PPATQ06203 517 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 IFFO2Q5TF58 517 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 CLMNQ96JQ2 1002 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 AIFM3Q96NN9 605 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 MTMR6Q9Y217 621 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 ZDHHC9Q9Y397 364 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 VPS37CA5D8V6 355 aaPredicted RBP26.62■■□□□ 1.85
CPSF4-204ENST00000436336 SPDYE5A6NIY4 337 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 WDR46O15213 610 aaKnown RBP26.62■■□□□ 1.85
CPSF4-204ENST00000436336 PFKFB3Q16875 520 aaPredicted RBP26.62■■□□□ 1.85
CPSF4-204ENST00000436336 FAM83BQ5T0W9 1011 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 BTNL9Q6UXG8 535 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 C2orf69Q8N8R5 385 aa26.62■■□□□ 1.85
CPSF4-204ENST00000436336 RBM46Q8TBY0 533 aaKnown RBP26.62■■□□□ 1.85
CPSF4-204ENST00000436336 RRP36Q96EU6 259 aaKnown RBP26.62■■□□□ 1.85
CPSF4-204ENST00000436336 hCG_1642624A0A1W2PR95 340 aa26.61■■□□□ 1.85
CPSF4-204ENST00000436336 TMEM232C9JQI7 657 aa26.61■■□□□ 1.85
CPSF4-204ENST00000436336 KIF3CO14782 793 aa26.61■■□□□ 1.85
CPSF4-204ENST00000436336 SCG2P13521 617 aa26.61■■□□□ 1.85
CPSF4-204ENST00000436336 ADGRF4Q8IZF3 695 aa26.61■■□□□ 1.85
CPSF4-204ENST00000436336 C12orf42Q96LP6 360 aa26.61■■□□□ 1.85
CPSF4-204ENST00000436336 EMILIN3Q9NT22 766 aa26.61■■□□□ 1.85
CPSF4-204ENST00000436336 LOC285556D6RIA3 1793 aa26.6■■□□□ 1.85
CPSF4-204ENST00000436336 PLA2G6O60733 806 aa26.6■■□□□ 1.85
CPSF4-204ENST00000436336 SLC16A2P36021 539 aa26.6■■□□□ 1.85
CPSF4-204ENST00000436336 STAT2P52630 851 aa26.6■■□□□ 1.85
CPSF4-204ENST00000436336 FBXO18Q8NFZ0 1043 aa26.6■■□□□ 1.85
CPSF4-204ENST00000436336 VAT1LQ9HCJ6 419 aa26.6■■□□□ 1.85
CPSF4-204ENST00000436336 SEC63Q9UGP8 760 aaKnown RBP26.6■■□□□ 1.85
CPSF4-204ENST00000436336 ZSCAN22P10073 491 aaPredicted RBP26.59■■□□□ 1.85
CPSF4-204ENST00000436336 XBP1P17861 261 aa26.59■■□□□ 1.85
CPSF4-204ENST00000436336 FOSBP53539 338 aa26.59■■□□□ 1.85
CPSF4-204ENST00000436336 TRIM29Q14134 588 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms