RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 SH2D3CQ8N5H7 860 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 STRBPQ96SI9 672 aaKnown RBP11.79□□□□□ -0.52
SCAF4-203ENST00000434667 DISP2A7MBM2 1401 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 PLEKP08567 350 aaPredicted RBP11.79□□□□□ -0.52
SCAF4-203ENST00000434667 PBX1P40424 430 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 USP5P45974 858 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 PROCA1Q8NCQ7 364 aaPredicted RBP11.79□□□□□ -0.52
SCAF4-203ENST00000434667 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 SMARCC1Q92922 1105 aaPredicted RBP11.79□□□□□ -0.52
SCAF4-203ENST00000434667 JADE2Q9NQC1 790 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 STRN4Q9NRL3 753 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 HPCAL4Q9UM19 191 aa11.79□□□□□ -0.52
SCAF4-203ENST00000434667 NMT2O60551 498 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 RNASE9P60153 205 aaKnown RBP11.78□□□□□ -0.52
SCAF4-203ENST00000434667 PSD3Q9NYI0 1048 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 SLC4A4Q9Y6R1 1079 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 XDHP47989 1333 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 MAGEA9P43362 315 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 AMPD2Q01433 879 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 ATP2B2Q01814 1243 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 WTAPQ15007 396 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 PTPROQ16827 1216 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 HPS3Q969F9 1004 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 CRACR2AQ9BSW2 395 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 SRPRBQ9Y5M8 271 aaKnown RBP11.78□□□□□ -0.52
SCAF4-203ENST00000434667 COL5A2P05997 1499 aaPredicted RBP11.78□□□□□ -0.52
SCAF4-203ENST00000434667 COL4A1P02462 1669 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 AGPSO00116 658 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 ZEB2O60315 1214 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 CLSTN1O94985 981 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 COPB1P53618 953 aaKnown RBP11.78□□□□□ -0.52
SCAF4-203ENST00000434667 HERVK_113P62684 666 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 FILIP1LQ4L180 1135 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 TRIM22Q8IYM9 498 aa11.78□□□□□ -0.52
SCAF4-203ENST00000434667 HNRNPLLQ8WVV9 542 aaKnown RBP11.78□□□□□ -0.52
SCAF4-203ENST00000434667 EPN1Q9Y6I3 576 aaPredicted RBP11.78□□□□□ -0.52
SCAF4-203ENST00000434667 EXOC5O00471 708 aa11.77□□□□□ -0.52
SCAF4-203ENST00000434667 PTGDRQ13258 359 aa11.77□□□□□ -0.52
SCAF4-203ENST00000434667 CDKAL1Q5VV42 579 aa11.77□□□□□ -0.52
SCAF4-203ENST00000434667 MFSD6Q6ZSS7 791 aa11.77□□□□□ -0.52
SCAF4-203ENST00000434667 CRACR2BQ8N4Y2 399 aaPredicted RBP11.77□□□□□ -0.52
SCAF4-203ENST00000434667 CCDC148Q8NFR7 591 aa11.77□□□□□ -0.52
SCAF4-203ENST00000434667 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.52
SCAF4-203ENST00000434667 FAM71BQ8TC56 605 aa11.77□□□□□ -0.52
SCAF4-203ENST00000434667 NELFBQ8WX92 580 aa11.77□□□□□ -0.52
SCAF4-203ENST00000434667 COL14A1Q05707 1796 aaKnown RBP11.77□□□□□ -0.52
SCAF4-203ENST00000434667 KCNJ18B7U540 433 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 NDUFA10O95299 355 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 IVLP07476 585 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 ZFYP08048 801 aaPredicted RBP11.77□□□□□ -0.53
SCAF4-203ENST00000434667 STIM1Q13586 685 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 KCNJ12Q14500 433 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 NT5DC1Q5TFE4 455 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 SND1Q7KZF4 910 aaKnown RBP eCLIP11.77□□□□□ -0.53
SCAF4-203ENST00000434667 FBXL16Q8N461 479 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 DCAF5Q96JK2 942 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 DMGDHQ9UI17 866 aaKnown RBP11.77□□□□□ -0.53
SCAF4-203ENST00000434667 DACH1Q9UI36 760 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 NCK2O43639 380 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 PRPF6O94906 941 aaKnown RBP11.77□□□□□ -0.53
SCAF4-203ENST00000434667 RDXP35241 583 aaKnown RBP11.77□□□□□ -0.53
SCAF4-203ENST00000434667 CORO7P57737 925 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 TICAM2Q86XR7 235 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 SELENOOQ9BVL4 669 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.77□□□□□ -0.531e-7■■□□□ 12.7
SCAF4-203ENST00000434667 GPR108Q9NPR9 543 aa11.77□□□□□ -0.53
SCAF4-203ENST00000434667 DOT1LQ8TEK3 1739 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 ESYT3A0FGR9 886 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 TRIM75PA6NK02 468 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 IL17AQ16552 155 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 PIK3AP1Q6ZUJ8 805 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.535e-7■■□□□ 12.8
SCAF4-203ENST00000434667 ZSCAN5CA6NGD5 496 aaPredicted RBP11.76□□□□□ -0.53
SCAF4-203ENST00000434667 B4DLN1 442 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 IFNAR1P17181 557 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 PRCPP42785 496 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 MAP9Q49MG5 647 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 RILPL1Q5EBL4 403 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 EP400NLQ6ZTU2 488 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 KIAA1328Q86T90 577 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 ZNF654Q8IZM8 581 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 JAKMIP2Q96AA8 810 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 GSG1L2A8MUP6 293 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 USP14P54578 494 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 CNGA4Q8IV77 575 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 COG1Q8WTW3 980 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 ARL8AQ96BM9 186 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 MLXIPQ9HAP2 919 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 BCCIPQ9P287 314 aaKnown RBP eCLIP11.76□□□□□ -0.53
SCAF4-203ENST00000434667 ABCF2Q9UG63 623 aa11.76□□□□□ -0.53
SCAF4-203ENST00000434667 AHDC1Q5TGY3 1603 aaPredicted RBP11.76□□□□□ -0.53
SCAF4-203ENST00000434667 ZC3H4Q9UPT8 1303 aaKnown RBP11.76□□□□□ -0.53
SCAF4-203ENST00000434667 BACH1O14867 736 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 RAD21O60216 631 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 BCAMP50895 628 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 PDCLQ13371 301 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 WDR59Q6PJI9 974 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 ADGRA1Q86SQ6 560 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms