RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 PCDHA7Q9UN72 937 aa14.31□□□□□ -0.12
SH3PXD2A-201ENST00000315994 RFX7Q2KHR2 1363 aa14.31□□□□□ -0.12
SH3PXD2A-201ENST00000315994 NR1I2O75469 434 aa14.31□□□□□ -0.12
SH3PXD2A-201ENST00000315994 SLC27A3Q5K4L6 730 aa14.31□□□□□ -0.12
SH3PXD2A-201ENST00000315994 CDAN1Q8IWY9 1227 aa14.31□□□□□ -0.12
SH3PXD2A-201ENST00000315994 CSRNP1Q96S65 589 aa14.31□□□□□ -0.12
SH3PXD2A-201ENST00000315994 KCNG1Q9UIX4 513 aa14.31□□□□□ -0.12
SH3PXD2A-201ENST00000315994 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.31□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TMEM232C9JQI7 657 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 CCDC122Q5T0U0 273 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 MRPL44Q9H9J2 332 aaKnown RBP14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TRAPPC10P48553 1259 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 GNPTABQ3T906 1256 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 HSF2BPO75031 334 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 ECM2O94769 699 aaPredicted RBP14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 LONP1P36776 959 aaKnown RBP14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TECP42680 631 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 SYT10Q6XYQ8 523 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 hCG_1984214I3L0E3 225 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 GCNT3O95395 438 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 MIER3Q7Z3K6 550 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 ZNF713Q8N859 430 aaPredicted RBP14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TRIML1Q8N9V2 468 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 DCPSQ96C86 337 aaKnown RBP14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 DDX25Q9UHL0 483 aaKnown RBP14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 SERPINB13Q9UIV8 391 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 PCDHA12Q9UN75 941 aa14.3□□□□□ -0.12
SH3PXD2A-201ENST00000315994 A0A1W2PQ27 194 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 A0A1W2PQ64 194 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 A0A1W2PQD8 194 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 FOSP01100 380 aaPredicted RBP14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 MMP10P09238 476 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 EEF2P13639 858 aaKnown RBP14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 PRR16Q569H4 304 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 EAPPQ56P03 285 aaPredicted RBP14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 ARHGEF16Q5VV41 709 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 STAMQ92783 540 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TMEM110-MUSTN1A8MSY1 372 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 ALAS1P13196 640 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TPH2Q8IWU9 490 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 CCDC94Q9BW85 323 aaPredicted RBP14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 PCDHA4Q9UN74 947 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 CLIC4Q9Y696 253 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 NEURL4Q96JN8 1562 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 LAD1O00515 517 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 PPP6R2O75170 966 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 KRBA2Q6ZNG9 492 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 OTUD6AQ7L8S5 288 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 BRIP1Q9BX63 1249 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 ADGRB1O14514 1584 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 HARSP12081 509 aaKnown RBP14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 MAP2K1Q02750 393 aaPredicted RBP14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TBC1D9BQ66K14 1250 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 RTKN2Q8IZC4 609 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 KANSL2Q9H9L4 492 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 ARFGAP3Q9NP61 516 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TAB2Q9NYJ8 693 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TBC1D7Q9P0N9 293 aa14.29□□□□□ -0.12
SH3PXD2A-201ENST00000315994 LIFRP42702 1097 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TRIM28Q13263 835 aaKnown RBP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 ASIC2Q16515 512 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 MAEAQ7L5Y9 396 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 IQCDQ96DY2 449 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 NOD1Q9Y239 953 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 PCDHA1Q9Y5I3 950 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 CD2BP2O95400 341 aaKnown RBP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 GNA14O95837 355 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 UIMC1Q96RL1 719 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 MINPP1Q9UNW1 487 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 PABPC4Q13310 644 aaKnown RBP eCLIP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 DPH6Q7L8W6 267 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 SULF1Q8IWU6 871 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 STRBPQ96SI9 672 aaKnown RBP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 SETD1BQ9UPS6 1966 aaKnown RBP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 CLRN2A0PK11 232 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 USP17L3A6NCW0 530 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 USP17L4A6NCW7 530 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 NBPF26B4DH59 902 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 POLR3GO15318 223 aaPredicted RBP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 KRT5P13647 590 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 NBPF10Q6P3W6 841 aaKnown RBP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 USP17L1Q7RTZ2 530 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 NBPF15Q8N660 670 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 SMCR8Q8TEV9 937 aaPredicted RBP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 GPHNQ9NQX3 736 aaPredicted RBP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 POLR3EQ9NVU0 708 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 ZSWIM5Q9P217 1185 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 FSD2A1L4K1 749 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TNFAIP3P21580 790 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 SMC1AQ14683 1233 aaKnown RBP14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 SLC39A14Q15043 492 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 KRT26Q7Z3Y9 468 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 NELFCDQ8IXH7 590 aa14.28□□□□□ -0.12
SH3PXD2A-201ENST00000315994 EXOC3O60645 756 aa14.27□□□□□ -0.12
SH3PXD2A-201ENST00000315994 PTGDRQ13258 359 aa14.27□□□□□ -0.12
SH3PXD2A-201ENST00000315994 GPBP1Q86WP2 473 aa14.27□□□□□ -0.12
SH3PXD2A-201ENST00000315994 TMTC1Q8IUR5 882 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms