RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ktn1Q61595 1327 aaKnown RBP24.29■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 PRAG1Q571I4 1179 aa24.29■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Clca4aQ6Q473 924 aa24.29■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Gpatch3Q8BIY1 525 aa24.29■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Snapc2Q91XA5 359 aa24.29■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Ubxn8Q9QZ49 277 aa24.29■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Cfap58B2RW38 873 aa24.28■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Kctd1Q5M956 257 aa24.28■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Tll1Q62381 1013 aa24.28■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Tmod2Q9JKK7 351 aa24.28■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 MthfslL7N466 203 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 4933416C03RikQ3V063 378 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Stxbp2Q64324 593 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 IqcgQ80W32 419 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 CrebrfQ8CDG5 640 aaKnown RBP24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Nat10Q8K224 1024 aaKnown RBP24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Trim11Q99PQ2 467 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Fam122aQ9DB52 284 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Wdr33Q8K4P0 1330 aaKnown RBP24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Pramel3A2AHA7 463 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Gm7903A2AWL1 463 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 AV320801A2AWL3 467 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Tex13cD3YU32 604 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Gm15023L7MUB4 467 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 L1camP11627 1260 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Bace1P56818 501 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 DSCC1Q14AI0 399 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Tmem109Q3UBX0 243 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Ttbk2Q3UVR3 1243 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Swap70Q6A028 585 aaKnown RBP24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Atp1a3Q6PIC6 1013 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Phf20Q8BLG0 1010 aaKnown RBP24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Scfd2Q8BTY8 684 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Smc2Q8CG48 1191 aaKnown RBP24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Sel1lQ9Z2G6 790 aa24.27■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Pabpc1lA2A5N3 607 aaKnown RBP24.26■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Kcna1P16388 495 aa24.26■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Gcnt1Q09324 428 aa24.26■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Tshz1Q5DTH5 1084 aa24.26■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Arhgef2Q60875 985 aa24.26■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Krt74Q6IFZ9 495 aa24.26■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Cdca8Q8BHX3 289 aa24.26■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 SrrtQ99MR6 875 aaKnown RBP24.26■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Hip1rQ9JKY5 1068 aa24.26■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Palm3A2TJV2 734 aa24.25■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Copb2O55029 905 aa24.25■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Mx1P09922 631 aa24.25■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Ccdc148Q6P5U8 527 aa24.25■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Ms4a5Q810P8 197 aa24.25■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Tut1Q8R3F9 869 aa24.25■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Gmcl1Q920G9 524 aa24.25■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 TbcbQ9D1E6 244 aa24.25■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 XdhQ00519 1335 aa24.25■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Cyp26c1B2RXA7 518 aa24.24■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 MarcksP26645 309 aaKnown RBP24.24■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 C8aQ8K182 587 aa24.24■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Prkab1Q9R078 270 aa24.24■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Acot9Q9R0X4 439 aaKnown RBP24.24■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Cyp7b1Q60991 507 aa24.24■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Tcp11l1Q8BTG3 509 aa24.24■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Tulp1Q9Z273 543 aa24.24■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Gdf10P97737 476 aa24.23■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Slc10a4Q3UEZ8 437 aa24.23■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 LRWD1Q8BUI3 648 aaKnown RBP24.23■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Phf20l1Q8CCJ9 1013 aa24.23■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 ArcQ9WV31 396 aa24.23■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Usp31E9Q6Y8 1344 aa24.22■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 SynrgQ5SV85 1306 aa24.22■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Api5O35841 504 aaKnown RBP24.22■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Myo1hQ9D6A1 958 aa24.22■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Frmpd4A2AFR3 1320 aa24.22■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Gm43638A0A0J9YU36 694 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Phldb3E9QAF4 648 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Prkg1P0C605 671 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Gna11P21278 359 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Trappc10Q3TLI0 1259 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Ttll12Q3UDE2 639 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Nlgn2Q69ZK9 836 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Senp6Q6P7W0 1132 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Kctd3Q8BFX3 815 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Dhx8A2A4P0 1244 aaKnown RBP24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Cxcl9P18340 126 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Mmp20P57748 482 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Gjb4Q02738 266 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Slc9a1Q61165 820 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Calhm4Q8CE93 315 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Galntl5Q9D4M9 431 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Sh3bgrQ9WUZ7 214 aa24.21■■□□□ 1.47
Ccdc88a-202ENSMUST00000109477 Tpd52l1O54818 204 aa24.2■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Pcdhb14Q6PB90 796 aa24.2■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Larp6Q8BN59 492 aa24.2■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Krt23Q99PS0 422 aa24.2■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 TnmdQ9EP64 317 aa24.2■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Il21rQ9JHX3 529 aa24.2■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 GdaQ9R111 454 aa24.2■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Nlrp5Q9R1M5 1163 aa24.2■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Zfp853A0A1D5RM95 733 aa24.19■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Yy1Q00899 414 aa24.19■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Znf697Q569E7 569 aa24.19■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Dlg1Q811D0 905 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 22,080 RNA–protein pairs in 122.6 ms