RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR48, Length 113 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR48	snR48	RPH1	P39956	796 aa		0.92	□□□□□ -2.26
snR48	snR48	YEN1	P40028	759 aa		0.92	□□□□□ -2.26
snR48	snR48	GPP1	P41277	250 aa	Known RBP	0.92	□□□□□ -2.26
snR48	snR48	YFR016C	P43597	1233 aa	Known RBP	0.92	□□□□□ -2.26
snR48	snR48	IKS1	P47042	667 aa		0.92	□□□□□ -2.26
snR48	snR48	TIS11	P47977	285 aa		0.92	□□□□□ -2.26
snR48	snR48	SPC105	P53148	917 aa		0.92	□□□□□ -2.26
snR48	snR48	ESF2	P53743	316 aa	Known RBP	0.92	□□□□□ -2.26
snR48	snR48	ADE16	P54113	591 aa	Known RBP	0.92	□□□□□ -2.26
snR48	snR48	MAK10	Q02197	733 aa		0.92	□□□□□ -2.26
snR48	snR48	VPS64	Q03944	604 aa		0.92	□□□□□ -2.26
snR48	snR48	TMA64	Q04600	565 aa	Known RBP	0.92	□□□□□ -2.26
snR48	snR48	SET6	Q12529	373 aa		0.92	□□□□□ -2.26
snR48	snR48	RPL15A	P05748	204 aa	Known RBP	0.91	□□□□□ -2.26
snR48	snR48	GID7	P25569	745 aa		0.91	□□□□□ -2.26
snR48	snR48	SPR1	P32603	445 aa		0.91	□□□□□ -2.26
snR48	snR48	LOS1	P33418	1100 aa	Predicted RBP	0.91	□□□□□ -2.26
snR48	snR48	HXT9	P40885	567 aa		0.91	□□□□□ -2.26
snR48	snR48	PMT3	P47190	753 aa		0.91	□□□□□ -2.26
snR48	snR48	SDT1	P53078	280 aa		0.91	□□□□□ -2.26
snR48	snR48	HOL1	P53389	586 aa		0.91	□□□□□ -2.26
snR48	snR48	ATG21	Q02887	496 aa		0.91	□□□□□ -2.26
snR48	snR48	YDL218W	Q07629	317 aa		0.91	□□□□□ -2.26
snR48	snR48	RVB2	Q12464	471 aa	Known RBP	0.91	□□□□□ -2.26
snR48	snR48	BI3	Q9ZZW7	517 aa		0.91	□□□□□ -2.26
snR48	snR48	FAB1	P34756	2278 aa		0.9	□□□□□ -2.26
snR48	snR48	TKL1	P23254	680 aa	Known RBP	0.9	□□□□□ -2.27
snR48	snR48	STE50	P25344	346 aa		0.9	□□□□□ -2.27
snR48	snR48	ADE17	P38009	592 aa	Known RBP	0.9	□□□□□ -2.27
snR48	snR48	SSP120	P39931	234 aa	Known RBP	0.9	□□□□□ -2.27
snR48	snR48	YNR029C	P53729	429 aa	Known RBP	0.9	□□□□□ -2.27
snR48	snR48	TDA7	P53882	636 aa	Predicted RBP	0.9	□□□□□ -2.27
snR48	snR48	TRI1	Q05024	226 aa		0.9	□□□□□ -2.27
snR48	snR48	HEL2	Q05580	639 aa	Known RBP	0.9	□□□□□ -2.27
snR48	snR48	ECM38	Q05902	660 aa	Predicted RBP	0.9	□□□□□ -2.27
snR48	snR48	AAD4	Q07747	329 aa		0.9	□□□□□ -2.27
snR48	snR48	COX11	P19516	300 aa	Known RBP	0.89	□□□□□ -2.27
snR48	snR48	PPG1	P32838	368 aa		0.89	□□□□□ -2.27
snR48	snR48	MSY1	P48527	492 aa		0.89	□□□□□ -2.27
snR48	snR48	GPG1	P53130	126 aa		0.89	□□□□□ -2.27
snR48	snR48	AIM6	Q07716	390 aa		0.89	□□□□□ -2.27
snR48	snR48	CHO1	P08456	276 aa		0.88	□□□□□ -2.27
snR48	snR48	POL3	P15436	1097 aa		0.88	□□□□□ -2.27
snR48	snR48	RFA2	P26754	273 aa	Known RBP	0.88	□□□□□ -2.27
snR48	snR48	AGP2	P38090	596 aa		0.88	□□□□□ -2.27
snR48	snR48	UBP13	P38187	747 aa		0.88	□□□□□ -2.27
snR48	snR48	OCA5	P38738	679 aa		0.88	□□□□□ -2.27
snR48	snR48	GPP2	P40106	250 aa	Known RBP	0.88	□□□□□ -2.27
snR48	snR48	RPR2	P40571	144 aa		0.88	□□□□□ -2.27
snR48	snR48	GUF1	P46943	645 aa		0.88	□□□□□ -2.27
snR48	snR48	RTT101	P47050	842 aa		0.88	□□□□□ -2.27
snR48	snR48	MHR1	Q06630	226 aa		0.88	□□□□□ -2.27
snR48	snR48	FMP45	Q07651	309 aa		0.88	□□□□□ -2.27
snR48	snR48	GRC3	Q07845	632 aa		0.88	□□□□□ -2.27
snR48	snR48	YEH2	Q07950	538 aa		0.88	□□□□□ -2.27
snR48	snR48	ICL2	Q12031	575 aa		0.88	□□□□□ -2.27
snR48	snR48	VAS1	P07806	1104 aa	Known RBP	0.87	□□□□□ -2.27
snR48	snR48	RAP1	P11938	827 aa		0.87	□□□□□ -2.27
snR48	snR48	PCT1	P13259	424 aa		0.87	□□□□□ -2.27
snR48	snR48	MTF1	P14908	341 aa	Known RBP	0.87	□□□□□ -2.27
snR48	snR48	NDC1	P32500	655 aa		0.87	□□□□□ -2.27
snR48	snR48	PTR2	P32901	601 aa		0.87	□□□□□ -2.27
snR48	snR48	TIF5	P38431	405 aa	Known RBP	0.87	□□□□□ -2.27
snR48	snR48	SCS2	P40075	244 aa	Known RBP	0.87	□□□□□ -2.27
snR48	snR48	YGR237C	P50089	785 aa		0.87	□□□□□ -2.27
snR48	snR48	COS10	P52924	374 aa		0.87	□□□□□ -2.27
snR48	snR48	SLD3	P53135	668 aa		0.87	□□□□□ -2.27
snR48	snR48	CRD1	Q07560	283 aa		0.87	□□□□□ -2.27
snR48	snR48	PSF3	Q12146	194 aa		0.87	□□□□□ -2.27
snR48	snR48	MCM4	P30665	933 aa	Known RBP	0.86	□□□□□ -2.27
snR48	snR48	ACH1	P32316	526 aa		0.86	□□□□□ -2.27
snR48	snR48	SAC1	P32368	623 aa	Known RBP	0.86	□□□□□ -2.27
snR48	snR48	TGL1	P34163	548 aa		0.86	□□□□□ -2.27
snR48	snR48	TAF5	P38129	798 aa		0.86	□□□□□ -2.27
snR48	snR48	TIF4631	P39935	952 aa	Known RBP	0.86	□□□□□ -2.27
snR48	snR48	RGI2	P40188	164 aa		0.86	□□□□□ -2.27
snR48	snR48	YIL060W	P40519	144 aa		0.86	□□□□□ -2.27
snR48	snR48	IDP2	P41939	412 aa		0.86	□□□□□ -2.27
snR48	snR48	YTP1	P53584	459 aa		0.86	□□□□□ -2.27
snR48	snR48	NUP100	Q02629	959 aa		0.86	□□□□□ -2.27
snR48	snR48	RBA50	Q04418	439 aa		0.86	□□□□□ -2.27
snR48	snR48	PET111	P08468	800 aa		0.85	□□□□□ -2.27
snR48	snR48	URK1	P27515	501 aa		0.85	□□□□□ -2.27
snR48	snR48	DEG1	P31115	442 aa	Known RBP	0.85	□□□□□ -2.27
snR48	snR48	YNK1	P36010	153 aa	Known RBP	0.85	□□□□□ -2.27
snR48	snR48	PHD1	P36093	366 aa		0.85	□□□□□ -2.27
snR48	snR48	MTC4	P38335	694 aa	Known RBP	0.85	□□□□□ -2.27
snR48	snR48	YER130C	P39959	443 aa		0.85	□□□□□ -2.27
snR48	snR48	PHM8	P40025	321 aa		0.85	□□□□□ -2.27
snR48	snR48	DJP1	P40564	432 aa		0.85	□□□□□ -2.27
snR48	snR48	AXL1	P40851	1208 aa		0.85	□□□□□ -2.27
snR48	snR48	DUG1	P43616	481 aa	Known RBP	0.85	□□□□□ -2.27
snR48	snR48	YGL082W	P53155	381 aa		0.85	□□□□□ -2.27
snR48	snR48	YLR152C	P54072	576 aa		0.85	□□□□□ -2.27
snR48	snR48	MOT3	P54785	490 aa	Known RBP	0.85	□□□□□ -2.27
snR48	snR48	YPL108W	Q02872	168 aa	Predicted RBP	0.85	□□□□□ -2.27
snR48	snR48	MSS11	Q03825	758 aa		0.85	□□□□□ -2.27
snR48	snR48	GTB1	Q04924	702 aa		0.85	□□□□□ -2.27
snR48	snR48	ERP1	Q05359	219 aa	Known RBP	0.85	□□□□□ -2.27
snR48	snR48	HCR1	Q05775	265 aa	Known RBP	0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms