RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C SWE1P32944 819 aa8.34□□□□□ -1.07
SRP54YPR088C SRP72P38688 640 aaKnown RBP8.34□□□□□ -1.07
SRP54YPR088C GND1P38720 489 aaKnown RBP8.34□□□□□ -1.07
SRP54YPR088C ACO2P39533 789 aa8.34□□□□□ -1.07
SRP54YPR088C ALG8P40351 577 aa8.34□□□□□ -1.07
SRP54YPR088C RPL34BP40525 121 aaKnown RBP8.34□□□□□ -1.07
SRP54YPR088C GYP8P43570 497 aa8.34□□□□□ -1.07
SRP54YPR088C MAD3P47074 515 aa8.34□□□□□ -1.07
SRP54YPR088C YJR124CP47159 448 aa8.34□□□□□ -1.07
SRP54YPR088C PYK2P52489 506 aaKnown RBP8.34□□□□□ -1.07
SRP54YPR088C TEL2P53038 688 aa8.34□□□□□ -1.07
SRP54YPR088C VEL1P53058 206 aa8.34□□□□□ -1.07
SRP54YPR088C FLC3P53121 802 aa8.34□□□□□ -1.07
SRP54YPR088C YNR065CP53751 1116 aa8.34□□□□□ -1.07
SRP54YPR088C IMP4P53941 290 aaKnown RBP8.34□□□□□ -1.07
SRP54YPR088C YVH1Q02256 364 aaKnown RBP8.34□□□□□ -1.07
SRP54YPR088C SPP2Q02521 185 aa8.34□□□□□ -1.07
SRP54YPR088C TVP15Q03860 143 aa8.34□□□□□ -1.07
SRP54YPR088C CSN9Q03981 162 aa8.34□□□□□ -1.07
SRP54YPR088C NUT2Q06213 157 aa8.34□□□□□ -1.07
SRP54YPR088C NUS1Q12063 375 aa8.34□□□□□ -1.07
SRP54YPR088C PER33Q12144 273 aa8.34□□□□□ -1.07
SRP54YPR088C FRT1Q99332 602 aa8.34□□□□□ -1.07
SRP54YPR088C LEU1P07264 779 aaKnown RBP8.33□□□□□ -1.08
SRP54YPR088C YCR099CP25657 155 aa8.33□□□□□ -1.08
SRP54YPR088C PYC2P32327 1180 aaKnown RBP8.33□□□□□ -1.08
SRP54YPR088C RRN3P36070 627 aa8.33□□□□□ -1.08
SRP54YPR088C LDB7P38210 180 aa8.33□□□□□ -1.08
SRP54YPR088C YDR089WP38966 869 aa8.33□□□□□ -1.08
SRP54YPR088C YNL143CP53908 130 aa8.33□□□□□ -1.08
SRP54YPR088C YMR155WQ03795 547 aa8.33□□□□□ -1.08
SRP54YPR088C RSB1Q08417 382 aa8.33□□□□□ -1.08
SRP54YPR088C HRK1Q08732 759 aaKnown RBP8.33□□□□□ -1.08
SRP54YPR088C TMA46Q12000 345 aaKnown RBP8.33□□□□□ -1.08
SRP54YPR088C APC9Q12107 265 aa8.33□□□□□ -1.08
SRP54YPR088C RIB2Q12362 591 aaKnown RBP8.33□□□□□ -1.08
SRP54YPR088C YOR338WQ99326 363 aa8.33□□□□□ -1.08
SRP54YPR088C UBR1P19812 1950 aa8.33□□□□□ -1.08
SRP54YPR088C COX6P00427 148 aa8.32□□□□□ -1.08
SRP54YPR088C ABF1P14164 731 aa8.32□□□□□ -1.08
SRP54YPR088C PRP4P20053 465 aaKnown RBP8.32□□□□□ -1.08
SRP54YPR088C NEM1P38757 446 aa8.32□□□□□ -1.08
SRP54YPR088C MED6P38782 295 aa8.32□□□□□ -1.08
SRP54YPR088C PET130P47065 347 aa8.32□□□□□ -1.08
SRP54YPR088C MNT2P53059 558 aa8.32□□□□□ -1.08
SRP54YPR088C BOL2P53082 120 aa8.32□□□□□ -1.08
SRP54YPR088C SPC105P53148 917 aa8.32□□□□□ -1.08
SRP54YPR088C YDR131CQ03899 556 aa8.32□□□□□ -1.08
SRP54YPR088C YHM2Q04013 314 aa8.32□□□□□ -1.08
SRP54YPR088C LCB5Q06147 687 aaKnown RBP8.32□□□□□ -1.08
SRP54YPR088C BET2P20133 325 aa8.32□□□□□ -1.08
SRP54YPR088C ARG1P22768 420 aa8.32□□□□□ -1.08
SRP54YPR088C SGF29P25554 259 aa8.32□□□□□ -1.08
SRP54YPR088C VAC17P25591 423 aa8.32□□□□□ -1.08
SRP54YPR088C MF(ALPHA)2P32435 120 aa8.32□□□□□ -1.08
SRP54YPR088C TFC3P34111 1160 aa8.32□□□□□ -1.08
SRP54YPR088C PXA2P34230 853 aa8.32□□□□□ -1.08
SRP54YPR088C ASK1P35734 292 aa8.32□□□□□ -1.08
SRP54YPR088C PHO11P35842 467 aa8.32□□□□□ -1.08
SRP54YPR088C STB6P36085 766 aa8.32□□□□□ -1.08
SRP54YPR088C PHO12P38693 467 aa8.32□□□□□ -1.08
SRP54YPR088C YHR131CP38835 850 aa8.32□□□□□ -1.08
SRP54YPR088C MGS1P40151 587 aa8.32□□□□□ -1.08
SRP54YPR088C AXL1P40851 1208 aa8.32□□□□□ -1.08
SRP54YPR088C GTS1P40956 396 aa8.32□□□□□ -1.08
SRP54YPR088C MRM2P53123 320 aa8.32□□□□□ -1.08
SRP54YPR088C SFB2P53953 876 aa8.32□□□□□ -1.08
SRP54YPR088C NHP10Q03435 203 aa8.32□□□□□ -1.08
SRP54YPR088C SPC24Q04477 213 aa8.32□□□□□ -1.08
SRP54YPR088C MDY2Q12285 212 aa8.32□□□□□ -1.08
SRP54YPR088C YPR117WQ06116 2489 aa8.31□□□□□ -1.08
SRP54YPR088C YPR089WO13585 888 aa8.31□□□□□ -1.08
SRP54YPR088C RHO2P06781 192 aa8.31□□□□□ -1.08
SRP54YPR088C HSC82P15108 705 aaKnown RBP8.31□□□□□ -1.08
SRP54YPR088C FPR1P20081 114 aaKnown RBP8.31□□□□□ -1.08
SRP54YPR088C NPP1P25353 742 aa8.31□□□□□ -1.08
SRP54YPR088C IMG2P25642 146 aaPredicted RBP8.31□□□□□ -1.08
SRP54YPR088C MVD1P32377 396 aaKnown RBP8.31□□□□□ -1.08
SRP54YPR088C STE13P33894 931 aa8.31□□□□□ -1.08
SRP54YPR088C MUP3P38734 546 aa8.31□□□□□ -1.08
SRP54YPR088C ERP5P38819 212 aa8.31□□□□□ -1.08
SRP54YPR088C REF2P42073 533 aaPredicted RBP8.31□□□□□ -1.08
SRP54YPR088C RMD8P43620 662 aa8.31□□□□□ -1.08
SRP54YPR088C GCD14P46959 383 aaPredicted RBP8.31□□□□□ -1.08
SRP54YPR088C GLG2P47011 380 aa8.31□□□□□ -1.08
SRP54YPR088C CRN1Q06440 651 aa8.31□□□□□ -1.08
SRP54YPR088C UBX3Q12229 455 aa8.31□□□□□ -1.08
SRP54YPR088C STB3Q12427 513 aa8.31□□□□□ -1.08
SRP54YPR088C CCH1P50077 2039 aa8.3□□□□□ -1.08
SRP54YPR088C KEX2P13134 814 aa8.3□□□□□ -1.08
SRP54YPR088C EXO70P19658 623 aa8.3□□□□□ -1.08
SRP54YPR088C RPB4P20433 221 aaPredicted RBP8.3□□□□□ -1.08
SRP54YPR088C PHO3P24031 467 aa8.3□□□□□ -1.08
SRP54YPR088C YCR090CP25654 182 aaKnown RBP8.3□□□□□ -1.08
SRP54YPR088C YJU3P28321 313 aa8.3□□□□□ -1.08
SRP54YPR088C STE5P32917 917 aa8.3□□□□□ -1.08
SRP54YPR088C YKL097CP34245 136 aa8.3□□□□□ -1.08
SRP54YPR088C CTP1P38152 299 aa8.3□□□□□ -1.08
SRP54YPR088C YHB1P39676 399 aaKnown RBP8.3□□□□□ -1.08
SRP54YPR088C RPH1P39956 796 aa8.3□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms