RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W TKL1P23254 680 aaKnown RBP1.04□□□□□ -2.24
SEC8YPR055W YCL049CP25577 312 aa1.04□□□□□ -2.24
SEC8YPR055W GCS1P35197 352 aa1.04□□□□□ -2.24
SEC8YPR055W MNN2P38069 597 aa1.04□□□□□ -2.24
SEC8YPR055W PFK26P40433 827 aaKnown RBP1.04□□□□□ -2.24
SEC8YPR055W TES1P41903 349 aaKnown RBP1.04□□□□□ -2.24
SEC8YPR055W LSC1P53598 329 aaKnown RBP1.04□□□□□ -2.24
SEC8YPR055W YNR061CP53747 219 aa1.04□□□□□ -2.24
SEC8YPR055W YNL058CP53947 316 aa1.04□□□□□ -2.24
SEC8YPR055W GTR1Q00582 310 aa1.04□□□□□ -2.24
SEC8YPR055W MRPL13Q02204 264 aa1.04□□□□□ -2.24
SEC8YPR055W PIG1Q06216 648 aa1.04□□□□□ -2.24
SEC8YPR055W MLH2Q07980 695 aa1.04□□□□□ -2.24
SEC8YPR055W NRT1Q08485 598 aa1.04□□□□□ -2.24
SEC8YPR055W BUD7Q08754 746 aa1.04□□□□□ -2.24
SEC8YPR055W EDE1P34216 1381 aa1.04□□□□□ -2.24
SEC8YPR055W MRP2P10663 115 aaPredicted RBP1.03□□□□□ -2.24
SEC8YPR055W SRP54P20424 541 aaKnown RBP1.03□□□□□ -2.24
SEC8YPR055W ERG8P24521 451 aa1.03□□□□□ -2.24
SEC8YPR055W PDR3P33200 976 aa1.03□□□□□ -2.24
SEC8YPR055W KTR3P38130 404 aaPredicted RBP1.03□□□□□ -2.24
SEC8YPR055W RFC1P38630 861 aaKnown RBP1.03□□□□□ -2.24
SEC8YPR055W HXT9P40885 567 aa1.03□□□□□ -2.24
SEC8YPR055W YNL234WP53857 426 aa1.03□□□□□ -2.24
SEC8YPR055W ASI1P54074 624 aa1.03□□□□□ -2.24
SEC8YPR055W YLR455WQ06188 304 aa1.03□□□□□ -2.24
SEC8YPR055W SNF1P06782 633 aaKnown RBP1.03□□□□□ -2.24
SEC8YPR055W YFL068WP0CX99 160 aa1.03□□□□□ -2.24
SEC8YPR055W YLL066W-AP0CY00 160 aa1.03□□□□□ -2.24
SEC8YPR055W YLL067W-AP0CY01 160 aa1.03□□□□□ -2.24
SEC8YPR055W MGR1P25573 417 aa1.03□□□□□ -2.24
SEC8YPR055W NUP120P35729 1037 aa1.03□□□□□ -2.24
SEC8YPR055W LHS1P36016 881 aa1.03□□□□□ -2.24
SEC8YPR055W NTR2P36118 322 aaPredicted RBP1.03□□□□□ -2.24
SEC8YPR055W ANS1P38832 159 aa1.03□□□□□ -2.24
SEC8YPR055W DJP1P40564 432 aa1.03□□□□□ -2.24
SEC8YPR055W SRL1Q08673 210 aa1.03□□□□□ -2.24
SEC8YPR055W NDD1Q08887 554 aa1.03□□□□□ -2.24
SEC8YPR055W RAP1P11938 827 aa1.02□□□□□ -2.25
SEC8YPR055W UBC1P21734 215 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W STV1P37296 890 aa1.02□□□□□ -2.25
SEC8YPR055W SPC97P38863 823 aa1.02□□□□□ -2.25
SEC8YPR055W TPM2P40414 161 aa1.02□□□□□ -2.25
SEC8YPR055W SEC24P40482 926 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W YIL060WP40519 144 aa1.02□□□□□ -2.25
SEC8YPR055W FAF1P40546 346 aaPredicted RBP1.02□□□□□ -2.25
SEC8YPR055W SAD1P43589 448 aa1.02□□□□□ -2.25
SEC8YPR055W UBP8P50102 471 aa1.02□□□□□ -2.25
SEC8YPR055W PSP1P50896 841 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W YRB30P53107 440 aaPredicted RBP1.02□□□□□ -2.25
SEC8YPR055W NNF2P53253 936 aa1.02□□□□□ -2.25
SEC8YPR055W EAF7P53911 425 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W RSM28Q03430 361 aa1.02□□□□□ -2.25
SEC8YPR055W CSR1Q06705 408 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W GPN2Q08726 347 aaPredicted RBP1.02□□□□□ -2.25
SEC8YPR055W TIP41Q12199 356 aa1.02□□□□□ -2.25
SEC8YPR055W UBX3Q12229 455 aa1.02□□□□□ -2.25
SEC8YPR055W YLR302CO13544 120 aa1.02□□□□□ -2.25
SEC8YPR055W SOF1P33750 489 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W FUI1P38196 639 aa1.02□□□□□ -2.25
SEC8YPR055W AXL2P38928 823 aa1.02□□□□□ -2.25
SEC8YPR055W TPA1P40032 644 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W RPS7BP48164 190 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W HOS2P53096 452 aaPredicted RBP1.02□□□□□ -2.25
SEC8YPR055W EKI1Q03764 534 aa1.02□□□□□ -2.25
SEC8YPR055W YDR415CQ04033 374 aaPredicted RBP1.02□□□□□ -2.25
SEC8YPR055W TFC6Q06339 672 aa1.02□□□□□ -2.25
SEC8YPR055W YDL218WQ07629 317 aa1.02□□□□□ -2.25
SEC8YPR055W BIK1P11709 440 aa1.02□□□□□ -2.25
SEC8YPR055W PFK2P16862 959 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
SEC8YPR055W CNS1P33313 385 aa1.02□□□□□ -2.25
SEC8YPR055W TEF4P36008 412 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W ESL2P36168 1195 aa1.02□□□□□ -2.25
SEC8YPR055W MRPL36P36531 177 aa1.02□□□□□ -2.25
SEC8YPR055W TOM71P38825 639 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W ECM10P39987 644 aa1.02□□□□□ -2.25
SEC8YPR055W YND1P40009 630 aa1.02□□□□□ -2.25
SEC8YPR055W FMP10P40098 244 aa1.02□□□□□ -2.25
SEC8YPR055W ASE1P50275 885 aa1.02□□□□□ -2.25
SEC8YPR055W PKP2P53170 491 aa1.02□□□□□ -2.25
SEC8YPR055W DCP2P53550 970 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W CSL4P53859 292 aaPredicted RBP1.02□□□□□ -2.25
SEC8YPR055W BET4Q00618 327 aa1.02□□□□□ -2.25
SEC8YPR055W SNO4Q04902 237 aa1.02□□□□□ -2.25
SEC8YPR055W ARP9Q05123 467 aa1.02□□□□□ -2.25
SEC8YPR055W VID22Q05934 901 aa1.02□□□□□ -2.25
SEC8YPR055W POS5Q06892 414 aa1.02□□□□□ -2.25
SEC8YPR055W HSP33Q08914 237 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W APL5Q08951 932 aaKnown RBP1.02□□□□□ -2.25
SEC8YPR055W HSP32Q08992 237 aa1.02□□□□□ -2.25
SEC8YPR055W BAG7Q12128 409 aa1.02□□□□□ -2.25
SEC8YPR055W BSC1Q12140 328 aa1.02□□□□□ -2.25
SEC8YPR055W MTF2P10849 440 aa1.01□□□□□ -2.25
SEC8YPR055W LEU5P38702 357 aa1.01□□□□□ -2.25
SEC8YPR055W IST3P40565 148 aaPredicted RBP1.01□□□□□ -2.25
SEC8YPR055W CTK2P46962 323 aa1.01□□□□□ -2.25
SEC8YPR055W NUP53Q03790 475 aa1.01□□□□□ -2.25
SEC8YPR055W ATG16Q03818 150 aa1.01□□□□□ -2.25
SEC8YPR055W UTP21Q06078 939 aaPredicted RBP1.01□□□□□ -2.25
SEC8YPR055W PSK2Q08217 1101 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 100.8 ms