RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	SPC97	P38863	823 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	PDS1	P40316	373 aa	Predicted RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	SHR5	P41912	237 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	BNA2	P47125	453 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	SHE10	P53075	577 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	DRN1	P53255	507 aa	Known RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	ARP4	P80428	489 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	PTA1	Q01329	785 aa	Predicted RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	RPM2	Q02773	1202 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	YMR027W	Q04371	470 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	RSB1	Q08417	382 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	YPL277C	Q08989	487 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	YOR022C	Q12204	715 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	YDR215C	Q12240	137 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	RRD2	Q12461	358 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	TY1B-A	O13527	1196 aa	Known RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	ADE3	P07245	946 aa	Known RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	YML002W	P0CF17	737 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	TPS2	P31688	896 aa	Known RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	DBF20	P32328	564 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	VPH2	P32341	215 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	MRS6	P32864	603 aa	Known RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	PTH2	P34222	208 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	SEG2	P34250	1132 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	UBP13	P38187	747 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	ERP2	P39704	215 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	SPC72	P39723	622 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	YMR134W	P40207	237 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	ASG1	P40467	964 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	LCB2	P40970	561 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	QRI7	P43122	407 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	FMP33	P46998	180 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	CTR1	P49573	406 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	RNR4	P49723	345 aa	Known RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	TEL2	P53038	688 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	RAI1	P53063	387 aa	Known RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	CNM67	P53865	581 aa	Known RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	FUS2	Q05670	677 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	ISA1	Q07821	250 aa	Predicted RBP	4.36	□□□□□ -1.71
TRF5	YNL299W	NSE1	Q07913	336 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	CIR2	Q08822	631 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	YPR053C	Q6Q5F3	151 aa		4.36	□□□□□ -1.71
TRF5	YNL299W	PRC1	P00729	532 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	SNF1	P06782	633 aa	Known RBP	4.35	□□□□□ -1.71
TRF5	YNL299W	SWI6	P09959	803 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	CHS2	P14180	963 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	ADY2	P25613	283 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	MGT1	P26188	188 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	DBF4	P32325	704 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	NPL6	P32832	435 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	HES1	P35843	434 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	KES1	P35844	434 aa	Known RBP	4.35	□□□□□ -1.71
TRF5	YNL299W	UBP11	P36026	717 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	CCL1	P37366	393 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	RPT2	P40327	437 aa	Known RBP	4.35	□□□□□ -1.71
TRF5	YNL299W	OYE3	P41816	400 aa	Predicted RBP	4.35	□□□□□ -1.71
TRF5	YNL299W	TAF1	P46677	1066 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	PRY1	P47032	299 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	VID30	P53076	958 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	YGR016W	P53209	190 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	ASI1	P54074	624 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	CEG1	Q01159	459 aa	Predicted RBP	4.35	□□□□□ -1.71
TRF5	YNL299W	FMN1	Q03778	218 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	KRE28	Q04431	385 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	SSL1	Q04673	461 aa	Predicted RBP	4.35	□□□□□ -1.71
TRF5	YNL299W	NDL1	Q06568	189 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	TY3A-G	Q12173	290 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	ERP3	Q12403	225 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
TRF5	YNL299W	TY3A-I	Q99219	290 aa		4.35	□□□□□ -1.71
TRF5	YNL299W	RPS9A	O13516	197 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	CDC33	P07260	213 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	URA4	P20051	364 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	MSB1	P21339	1137 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	TKL1	P23254	680 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	YCK2	P23292	546 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	RRT12	P25381	491 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	AAD3	P25612	363 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	SEC21	P32074	935 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	TYE7	P33122	291 aa	Predicted RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	RIB7	P33312	244 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	SET3	P36124	751 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	FLR1	P38124	548 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	DUG2	P38149	878 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	TRM5	P38793	499 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	DPH1	P40487	425 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	LIA1	P47120	325 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	COS5	P47187	383 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	RBL2	P48606	106 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	DIP5	P53388	608 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	CDA1	Q06702	301 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	VHS3	Q08438	674 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	PGK1	P00560	416 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	PRP22	P24384	1145 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	EFT1	P32324	842 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	ATO2	P32907	282 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	SRP101	P32916	621 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	PGM1	P33401	570 aa	Known RBP	4.34	□□□□□ -1.71
TRF5	YNL299W	COY1	P34237	679 aa		4.34	□□□□□ -1.71
TRF5	YNL299W	DBP7	P36120	742 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms