RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W YIL161WP40449 235 aaKnown RBP2.97□□□□□ -1.93
CTK3YML112W ASI1P54074 624 aa2.97□□□□□ -1.93
CTK3YML112W PFA5Q03289 374 aa2.97□□□□□ -1.93
CTK3YML112W YMR317WQ04893 1140 aa2.97□□□□□ -1.93
CTK3YML112W VAM6Q07468 1049 aa2.97□□□□□ -1.93
CTK3YML112W RRP6Q12149 733 aaKnown RBP2.97□□□□□ -1.93
CTK3YML112W ATP2P00830 511 aaKnown RBP2.96□□□□□ -1.94
CTK3YML112W ATP4P05626 244 aa2.96□□□□□ -1.94
CTK3YML112W SPO16P17122 198 aa2.96□□□□□ -1.94
CTK3YML112W TKL1P23254 680 aaKnown RBP2.96□□□□□ -1.94
CTK3YML112W STE50P25344 346 aa2.96□□□□□ -1.94
CTK3YML112W LHS1P36016 881 aa2.96□□□□□ -1.94
CTK3YML112W ERR3P42222 437 aa2.96□□□□□ -1.94
CTK3YML112W HOS2P53096 452 aaPredicted RBP2.96□□□□□ -1.94
CTK3YML112W UTP21Q06078 939 aaPredicted RBP2.96□□□□□ -1.94
CTK3YML112W YTH1Q06102 208 aaPredicted RBP2.96□□□□□ -1.94
CTK3YML112W APL5Q08951 932 aaKnown RBP2.96□□□□□ -1.94
CTK3YML112W TAH18Q12181 623 aa2.96□□□□□ -1.94
CTK3YML112W PHO2P07269 559 aa2.95□□□□□ -1.94
CTK3YML112W PET111P08468 800 aa2.95□□□□□ -1.94
CTK3YML112W CDC23P16522 626 aa2.95□□□□□ -1.94
CTK3YML112W HNM1P19807 563 aa2.95□□□□□ -1.94
CTK3YML112W MRPL36P36531 177 aa2.95□□□□□ -1.94
CTK3YML112W BZZ1P38822 633 aa2.95□□□□□ -1.94
CTK3YML112W MRX1P40050 688 aa2.95□□□□□ -1.94
CTK3YML112W IML2P47031 731 aa2.95□□□□□ -1.94
CTK3YML112W YNL234WP53857 426 aa2.95□□□□□ -1.94
CTK3YML112W CRN1Q06440 651 aa2.95□□□□□ -1.94
CTK3YML112W NYV1Q12255 253 aa2.95□□□□□ -1.94
CTK3YML112W NCP1P16603 691 aaKnown RBP2.94□□□□□ -1.94
CTK3YML112W FMP46P36141 133 aaKnown RBP2.94□□□□□ -1.94
CTK3YML112W RPT2P40327 437 aaKnown RBP2.94□□□□□ -1.94
CTK3YML112W GIS2P53849 153 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
CTK3YML112W YNL181WP53878 407 aa2.94□□□□□ -1.94
CTK3YML112W SMA1Q02651 245 aa2.94□□□□□ -1.94
CTK3YML112W ARP10Q04549 284 aa2.94□□□□□ -1.94
CTK3YML112W MCP2Q06567 569 aa2.94□□□□□ -1.94
CTK3YML112W GUK1P15454 187 aaKnown RBP2.93□□□□□ -1.94
CTK3YML112W YEF3P16521 1044 aaKnown RBP2.93□□□□□ -1.94
CTK3YML112W PHO81P17442 1178 aa2.93□□□□□ -1.94
CTK3YML112W MGR1P25573 417 aa2.93□□□□□ -1.94
CTK3YML112W RAD24P32641 659 aa2.93□□□□□ -1.94
CTK3YML112W PDR3P33200 976 aa2.93□□□□□ -1.94
CTK3YML112W SOF1P33750 489 aaKnown RBP2.93□□□□□ -1.94
CTK3YML112W AAP1P37898 856 aaKnown RBP2.93□□□□□ -1.94
CTK3YML112W YPK3P38070 525 aa2.93□□□□□ -1.94
CTK3YML112W EFM2P38347 419 aa2.93□□□□□ -1.94
CTK3YML112W NPR3P38742 1146 aa2.93□□□□□ -1.94
CTK3YML112W SEC31P38968 1273 aaKnown RBP2.93□□□□□ -1.94
CTK3YML112W PSF2P40359 213 aa2.93□□□□□ -1.94
CTK3YML112W CTK2P46962 323 aa2.93□□□□□ -1.94
CTK3YML112W ATG27P46989 271 aa2.93□□□□□ -1.94
CTK3YML112W PAP2P53632 584 aaKnown RBP2.93□□□□□ -1.94
CTK3YML112W COX17Q12287 69 aa2.93□□□□□ -1.94
CTK3YML112W YMR230W-AQ3E7B5 62 aa2.93□□□□□ -1.94
CTK3YML112W NUC1P08466 329 aa2.92□□□□□ -1.94
CTK3YML112W SEC1P30619 724 aaKnown RBP2.92□□□□□ -1.94
CTK3YML112W SAC1P32368 623 aaKnown RBP2.92□□□□□ -1.94
CTK3YML112W NTR2P36118 322 aaPredicted RBP2.92□□□□□ -1.94
CTK3YML112W ACA1P39970 489 aa2.92□□□□□ -1.94
CTK3YML112W HXT9P40885 567 aa2.92□□□□□ -1.94
CTK3YML112W SWP82P43554 623 aa2.92□□□□□ -1.94
CTK3YML112W ASE1P50275 885 aa2.92□□□□□ -1.94
CTK3YML112W SGF73P53165 657 aa2.92□□□□□ -1.94
CTK3YML112W CSL4P53859 292 aaPredicted RBP2.92□□□□□ -1.94
CTK3YML112W RSM28Q03430 361 aa2.92□□□□□ -1.94
CTK3YML112W SCW10Q04951 389 aa2.92□□□□□ -1.94
CTK3YML112W TMA16Q08687 178 aa2.92□□□□□ -1.94
CTK3YML112W RAP1P11938 827 aa2.91□□□□□ -1.94
CTK3YML112W RPN2P32565 945 aaKnown RBP2.91□□□□□ -1.94
CTK3YML112W COG1P53079 417 aa2.91□□□□□ -1.94
CTK3YML112W CUL3P53202 744 aa2.91□□□□□ -1.94
CTK3YML112W CTL1Q03220 320 aaKnown RBP2.91□□□□□ -1.94
CTK3YML112W EKI1Q03764 534 aa2.91□□□□□ -1.94
CTK3YML112W YLR352WQ06479 807 aa2.91□□□□□ -1.94
CTK3YML112W TIP41Q12199 356 aa2.91□□□□□ -1.94
CTK3YML112W PCD1Q12524 340 aa2.91□□□□□ -1.94
CTK3YML112W TY2A-LR1P0C2J4 438 aa2.9□□□□□ -1.95
CTK3YML112W TY2A-FP0CX61 438 aa2.9□□□□□ -1.95
CTK3YML112W TY2A-GR2P0CX62 438 aa2.9□□□□□ -1.95
CTK3YML112W RPB8P20436 146 aa2.9□□□□□ -1.95
CTK3YML112W MSM1P22438 575 aa2.9□□□□□ -1.95
CTK3YML112W TY2A-CP25383 438 aa2.9□□□□□ -1.95
CTK3YML112W YCL049CP25577 312 aa2.9□□□□□ -1.95
CTK3YML112W SRB5P32585 307 aa2.9□□□□□ -1.95
CTK3YML112W ECM10P39987 644 aa2.9□□□□□ -1.95
CTK3YML112W RPN11P43588 306 aaKnown RBP2.9□□□□□ -1.95
CTK3YML112W YTP1P53584 459 aa2.9□□□□□ -1.95
CTK3YML112W MRPL13Q02204 264 aa2.9□□□□□ -1.95
CTK3YML112W TY2A-DR2Q03483 438 aa2.9□□□□□ -1.95
CTK3YML112W TY2A-BQ12260 438 aa2.9□□□□□ -1.95
CTK3YML112W TY2A-OR2Q12293 438 aa2.9□□□□□ -1.95
CTK3YML112W TY2A-DR1Q12392 438 aa2.9□□□□□ -1.95
CTK3YML112W TY2A-OR1Q12439 438 aa2.9□□□□□ -1.95
CTK3YML112W TY2A-DR3Q99303 438 aa2.9□□□□□ -1.95
CTK3YML112W TPK1P06244 397 aa2.89□□□□□ -1.95
CTK3YML112W BAR1P12630 587 aa2.89□□□□□ -1.95
CTK3YML112W KRS1P15180 591 aaKnown RBP2.89□□□□□ -1.95
CTK3YML112W CLB2P24869 491 aa2.89□□□□□ -1.95
CTK3YML112W TRS65P32893 560 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms