RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W SWA2Q06677 668 aa4.84□□□□□ -1.63
YML040WYML040W KIN3P22209 435 aa4.83□□□□□ -1.64
YML040WYML040W ROX1P25042 368 aa4.83□□□□□ -1.64
YML040WYML040W MRPL9P31334 269 aa4.83□□□□□ -1.64
YML040WYML040W PDB1P32473 366 aaKnown RBP4.83□□□□□ -1.64
YML040WYML040W AUR1P36107 401 aaPredicted RBP4.83□□□□□ -1.64
YML040WYML040W KTR3P38130 404 aaPredicted RBP4.83□□□□□ -1.64
YML040WYML040W YNG2P38806 282 aaKnown RBP4.83□□□□□ -1.64
YML040WYML040W UTP9P38882 575 aaKnown RBP4.83□□□□□ -1.64
YML040WYML040W CCT6P39079 546 aa4.83□□□□□ -1.64
YML040WYML040W GND2P53319 492 aa4.83□□□□□ -1.64
YML040WYML040W DCP2P53550 970 aaKnown RBP4.83□□□□□ -1.64
YML040WYML040W TIM44Q01852 431 aa4.83□□□□□ -1.64
YML040WYML040W FCP1Q03254 732 aa4.83□□□□□ -1.64
YML040WYML040W GIS1Q03833 894 aa4.83□□□□□ -1.64
YML040WYML040W SYF1Q04048 859 aaPredicted RBP4.83□□□□□ -1.64
YML040WYML040W SPN1Q06505 410 aaPredicted RBP4.83□□□□□ -1.64
YML040WYML040W RAD34Q06665 692 aa4.83□□□□□ -1.64
YML040WYML040W MRH1Q12117 320 aaPredicted RBP4.83□□□□□ -1.64
YML040WYML040W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
YML040WYML040W MET17P06106 444 aa4.82□□□□□ -1.64
YML040WYML040W STE12P13574 688 aa4.82□□□□□ -1.64
YML040WYML040W MTH1P35198 433 aa4.82□□□□□ -1.64
YML040WYML040W SEC31P38968 1273 aaKnown RBP4.82□□□□□ -1.64
YML040WYML040W LSM5P40089 93 aaKnown RBP4.82□□□□□ -1.64
YML040WYML040W ARF3P40994 183 aaRIP-Chip data4.82□□□□□ -1.64not detected
YML040WYML040W UBX6P47049 396 aa4.82□□□□□ -1.64
YML040WYML040W GLO1P50107 326 aa4.82□□□□□ -1.64
YML040WYML040W ARP9Q05123 467 aa4.82□□□□□ -1.64
YML040WYML040W RCN2Q12044 265 aa4.82□□□□□ -1.64
YML040WYML040W AHA1Q12449 350 aaKnown RBP4.82□□□□□ -1.64
YML040WYML040W RED1P14291 827 aa4.81□□□□□ -1.64
YML040WYML040W PWP1P21304 576 aaKnown RBP4.81□□□□□ -1.64
YML040WYML040W DMC1P25453 334 aa4.81□□□□□ -1.64
YML040WYML040W POL4P25615 582 aa4.81□□□□□ -1.64
YML040WYML040W CDC15P27636 974 aa4.81□□□□□ -1.64
YML040WYML040W EXO1P39875 702 aa4.81□□□□□ -1.64
YML040WYML040W YEL057CP39983 233 aa4.81□□□□□ -1.64
YML040WYML040W MET28P40573 187 aa4.81□□□□□ -1.64
YML040WYML040W OPT1P40897 799 aa4.81□□□□□ -1.64
YML040WYML040W VPS73P53142 486 aaKnown RBP4.81□□□□□ -1.64
YML040WYML040W CYK3Q07533 885 aa4.81□□□□□ -1.64
YML040WYML040W YEH1Q07804 573 aa4.81□□□□□ -1.64
YML040WYML040W RRG1Q12167 365 aaPredicted RBP4.81□□□□□ -1.64
YML040WYML040W YMR084WA2P2R3 262 aa4.8□□□□□ -1.64
YML040WYML040W CBS1P14066 229 aa4.8□□□□□ -1.64
YML040WYML040W OCA4P25366 362 aa4.8□□□□□ -1.64
YML040WYML040W CIR1P42940 261 aa4.8□□□□□ -1.64
YML040WYML040W RSM28Q03430 361 aa4.8□□□□□ -1.64
YML040WYML040W TCO89Q08921 799 aa4.8□□□□□ -1.64
YML040WYML040W GRX6Q12438 231 aa4.8□□□□□ -1.64
YML040WYML040W YJR112W-AQ3E743 109 aa4.8□□□□□ -1.64
YML040WYML040W RTC1Q08281 1341 aa4.8□□□□□ -1.64
YML040WYML040W CDC43P18898 376 aa4.79□□□□□ -1.64
YML040WYML040W LCB1P25045 558 aaKnown RBP4.79□□□□□ -1.64
YML040WYML040W SAT4P25333 603 aaKnown RBP4.79□□□□□ -1.64
YML040WYML040W AAD3P25612 363 aa4.79□□□□□ -1.64
YML040WYML040W PTC6P25646 442 aa4.79□□□□□ -1.64
YML040WYML040W YMC1P32331 307 aa4.79□□□□□ -1.64
YML040WYML040W GSH1P32477 678 aa4.79□□□□□ -1.64
YML040WYML040W SRO77P38163 1010 aa4.79□□□□□ -1.64
YML040WYML040W MET18P40469 1032 aa4.79□□□□□ -1.64
YML040WYML040W ROK1P45818 564 aaPredicted RBP4.79□□□□□ -1.64
YML040WYML040W SAE2P46946 345 aa4.79□□□□□ -1.64
YML040WYML040W STR3P53101 465 aaKnown RBP4.79□□□□□ -1.64
YML040WYML040W JJJ1P53863 590 aa4.79□□□□□ -1.64
YML040WYML040W RPT6Q01939 405 aaKnown RBP4.79□□□□□ -1.64
YML040WYML040W YML037CQ03703 340 aa4.79□□□□□ -1.64
YML040WYML040W PSR1Q07800 427 aa4.79□□□□□ -1.64
YML040WYML040W LEA1Q08963 238 aaPredicted RBP4.79□□□□□ -1.64
YML040WYML040W ATG9Q12142 997 aa4.79□□□□□ -1.64
YML040WYML040W SUT2Q12286 268 aa4.79□□□□□ -1.64
YML040WYML040W YPT6Q99260 215 aa4.79□□□□□ -1.64
YML040WYML040W SEC3P33332 1336 aaKnown RBP4.79□□□□□ -1.64
YML040WYML040W AQY1P0CD91 305 aa4.78□□□□□ -1.64
YML040WYML040W FUR1P18562 216 aaKnown RBP4.78□□□□□ -1.64
YML040WYML040W MAK32P23060 363 aa4.78□□□□□ -1.64
YML040WYML040W UGP1P32861 499 aaKnown RBP4.78□□□□□ -1.64
YML040WYML040W ADE17P38009 592 aaKnown RBP4.78□□□□□ -1.64
YML040WYML040W DIA4P38705 446 aaPredicted RBP4.78□□□□□ -1.64
YML040WYML040W ECM10P39987 644 aa4.78□□□□□ -1.64
YML040WYML040W YEL020CP39994 560 aa4.78□□□□□ -1.64
YML040WYML040W CTK2P46962 323 aa4.78□□□□□ -1.64
YML040WYML040W LCL3P53153 274 aa4.78□□□□□ -1.64
YML040WYML040W MDG1P53885 366 aa4.78□□□□□ -1.64
YML040WYML040W LYS21Q12122 440 aaKnown RBP4.78□□□□□ -1.64
YML040WYML040W GET3Q12154 354 aaKnown RBP4.78□□□□□ -1.64
YML040WYML040W RTN2Q12443 393 aa4.78□□□□□ -1.64
YML040WYML040W ARD1P07347 238 aaPredicted RBP4.77□□□□□ -1.65
YML040WYML040W PET111P08468 800 aa4.77□□□□□ -1.65
YML040WYML040W RPC53P25441 422 aa4.77□□□□□ -1.65
YML040WYML040W PEP3P27801 918 aa4.77□□□□□ -1.65
YML040WYML040W MNN2P38069 597 aa4.77□□□□□ -1.65
YML040WYML040W SGN1P40561 250 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
YML040WYML040W AXL1P40851 1208 aa4.77□□□□□ -1.65
YML040WYML040W CDC1P40986 491 aa4.77□□□□□ -1.65
YML040WYML040W GPD2P41911 440 aaKnown RBP4.77□□□□□ -1.65
YML040WYML040W MRK1P50873 501 aa4.77□□□□□ -1.65
YML040WYML040W YPR003CP53394 754 aa4.77□□□□□ -1.65
YML040WYML040W YDR131CQ03899 556 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms