RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C MSH5Q12175 901 aa4.5□□□□□ -1.69
CDC42YLR229C ECM3Q99252 613 aa4.5□□□□□ -1.69
CDC42YLR229C YPT6Q99260 215 aa4.5□□□□□ -1.69
CDC42YLR229C SUI3P09064 285 aaKnown RBP4.49□□□□□ -1.69
CDC42YLR229C ASP3-2P0CX77 362 aa4.49□□□□□ -1.69
CDC42YLR229C ASP3-3P0CX78 362 aa4.49□□□□□ -1.69
CDC42YLR229C ASP3-4P0CX79 362 aa4.49□□□□□ -1.69
CDC42YLR229C ASP3-1P0CZ17 362 aa4.49□□□□□ -1.69
CDC42YLR229C MAS2P11914 482 aa4.49□□□□□ -1.69
CDC42YLR229C WHI2P12611 486 aa4.49□□□□□ -1.69
CDC42YLR229C URA4P20051 364 aa4.49□□□□□ -1.69
CDC42YLR229C ADE2P21264 571 aaKnown RBP4.49□□□□□ -1.69
CDC42YLR229C RPC19P28000 142 aaKnown RBP4.49□□□□□ -1.69
CDC42YLR229C EFB1P32471 206 aaKnown RBP4.49□□□□□ -1.69
CDC42YLR229C KAR9P32526 644 aa4.49□□□□□ -1.69
CDC42YLR229C GYP6P32806 458 aa4.49□□□□□ -1.69
CDC42YLR229C SPC29P33419 253 aa4.49□□□□□ -1.69
CDC42YLR229C COY1P34237 679 aa4.49□□□□□ -1.69
CDC42YLR229C EMC3P36039 253 aa4.49□□□□□ -1.69
CDC42YLR229C YKR015CP36111 568 aa4.49□□□□□ -1.69
CDC42YLR229C FLR1P38124 548 aa4.49□□□□□ -1.69
CDC42YLR229C RFC3P38629 340 aa4.49□□□□□ -1.69
CDC42YLR229C NUP60P39705 539 aa4.49□□□□□ -1.69
CDC42YLR229C AIM20P40451 204 aa4.49□□□□□ -1.69
CDC42YLR229C AIM21P40563 679 aa4.49□□□□□ -1.69
CDC42YLR229C FMP33P46998 180 aa4.49□□□□□ -1.69
CDC42YLR229C SHE4P51534 789 aa4.49□□□□□ -1.69
CDC42YLR229C ZIP2P53061 704 aa4.49□□□□□ -1.69
CDC42YLR229C RAI1P53063 387 aaKnown RBP4.49□□□□□ -1.69
CDC42YLR229C NOG2P53742 486 aaKnown RBP4.49□□□□□ -1.69
CDC42YLR229C COG6P53959 839 aa4.49□□□□□ -1.69
CDC42YLR229C KTR5P53966 522 aaPredicted RBP4.49□□□□□ -1.69
CDC42YLR229C TMA20P89886 181 aaPredicted RBP4.49□□□□□ -1.69
CDC42YLR229C SRL4Q03085 281 aa4.49□□□□□ -1.69
CDC42YLR229C ATP25Q03153 612 aa4.49□□□□□ -1.69
CDC42YLR229C SIZ1Q04195 904 aa4.49□□□□□ -1.69
CDC42YLR229C UFO1Q04511 668 aa4.49□□□□□ -1.69
CDC42YLR229C MET7Q08645 548 aa4.49□□□□□ -1.69
CDC42YLR229C ZPS1Q12512 249 aa4.49□□□□□ -1.69
CDC42YLR229C BI2P03873 423 aa4.48□□□□□ -1.69
CDC42YLR229C GAL10P04397 699 aa4.48□□□□□ -1.69
CDC42YLR229C ILV2P07342 687 aaKnown RBP4.48□□□□□ -1.69
CDC42YLR229C EST1P17214 699 aaPredicted RBP4.48□□□□□ -1.69
CDC42YLR229C SFL1P20134 766 aa4.48□□□□□ -1.69
CDC42YLR229C SPS22P25380 463 aa4.48□□□□□ -1.69
CDC42YLR229C AFR1P33304 620 aa4.48□□□□□ -1.69
CDC42YLR229C TRM2P33753 639 aa4.48□□□□□ -1.69
CDC42YLR229C NUF2P33895 451 aa4.48□□□□□ -1.69
CDC42YLR229C SET3P36124 751 aa4.48□□□□□ -1.69
CDC42YLR229C POA1P38218 177 aa4.48□□□□□ -1.69
CDC42YLR229C VHC1P38329 1120 aa4.48□□□□□ -1.69
CDC42YLR229C POP4P38336 279 aa4.48□□□□□ -1.69
CDC42YLR229C MSG5P38590 489 aa4.48□□□□□ -1.69
CDC42YLR229C CBR1P38626 284 aaKnown RBP4.48□□□□□ -1.69
CDC42YLR229C KSP1P38691 1029 aaKnown RBP4.48□□□□□ -1.69
CDC42YLR229C LAM1P38851 1228 aa4.48□□□□□ -1.69
CDC42YLR229C YMR134WP40207 237 aa4.48□□□□□ -1.69
CDC42YLR229C DIM1P41819 318 aaKnown RBP4.48□□□□□ -1.69
CDC42YLR229C SHR5P41912 237 aa4.48□□□□□ -1.69
CDC42YLR229C ATG36P46983 293 aa4.48□□□□□ -1.69
CDC42YLR229C ECL1P48235 211 aa4.48□□□□□ -1.69
CDC42YLR229C HLJ1P48353 224 aa4.48□□□□□ -1.69
CDC42YLR229C INP52P50942 1183 aa4.48□□□□□ -1.69
CDC42YLR229C YMR027WQ04371 470 aa4.48□□□□□ -1.69
CDC42YLR229C IVY1Q04934 453 aa4.48□□□□□ -1.69
CDC42YLR229C ORM2Q06144 216 aa4.48□□□□□ -1.69
CDC42YLR229C XYL2Q07993 356 aa4.48□□□□□ -1.69
CDC42YLR229C OSW1Q08692 278 aa4.48□□□□□ -1.69
CDC42YLR229C ENV7Q12003 364 aa4.48□□□□□ -1.69
CDC42YLR229C DFG16Q99234 619 aa4.48□□□□□ -1.69
CDC42YLR229C BI3Q9ZZW7 517 aa4.48□□□□□ -1.69
CDC42YLR229C TUB3P09734 445 aaKnown RBP4.47□□□□□ -1.69
CDC42YLR229C YML002WP0CF17 737 aa4.47□□□□□ -1.69
CDC42YLR229C RPL4AP10664 362 aaKnown RBP4.47□□□□□ -1.69
CDC42YLR229C CLB2P24869 491 aa4.47□□□□□ -1.69
CDC42YLR229C CLB3P24870 427 aa4.47□□□□□ -1.69
CDC42YLR229C KAR4P25583 335 aa4.47□□□□□ -1.69
CDC42YLR229C VBA3P25594 458 aa4.47□□□□□ -1.69
CDC42YLR229C PRR1P28708 518 aa4.47□□□□□ -1.69
CDC42YLR229C RPN2P32565 945 aaKnown RBP4.47□□□□□ -1.69
CDC42YLR229C SEC6P32844 805 aa4.47□□□□□ -1.69
CDC42YLR229C TYE7P33122 291 aaPredicted RBP4.47□□□□□ -1.69
CDC42YLR229C SEC66P33754 206 aa4.47□□□□□ -1.69
CDC42YLR229C NOP4P37838 685 aaKnown RBP4.47□□□□□ -1.69
CDC42YLR229C YBR238CP38330 731 aaKnown RBP4.47□□□□□ -1.69
CDC42YLR229C PCA1P38360 1216 aa4.47□□□□□ -1.69
CDC42YLR229C SPC97P38863 823 aa4.47□□□□□ -1.69
CDC42YLR229C PET100P38958 111 aa4.47□□□□□ -1.69
CDC42YLR229C FRT2P39734 528 aa4.47□□□□□ -1.69
CDC42YLR229C IES5P40060 125 aa4.47□□□□□ -1.69
CDC42YLR229C TMN3P40071 706 aa4.47□□□□□ -1.69
CDC42YLR229C GYP8P43570 497 aa4.47□□□□□ -1.69
CDC42YLR229C LIA1P47120 325 aaKnown RBP4.47□□□□□ -1.69
CDC42YLR229C RPL4BP49626 362 aaKnown RBP4.47□□□□□ -1.69
CDC42YLR229C YML6P51998 286 aa4.47□□□□□ -1.69
CDC42YLR229C MIG2P53035 382 aa4.47□□□□□ -1.69
CDC42YLR229C YGL036WP53185 909 aaPredicted RBP4.47□□□□□ -1.69
CDC42YLR229C YGR283CP53336 341 aaPredicted RBP4.47□□□□□ -1.69
CDC42YLR229C YNL040WP53960 456 aaPredicted RBP4.47□□□□□ -1.69
CDC42YLR229C GPD1Q00055 391 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms