RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W ACO1P19414 778 aaKnown RBP RIP-Chip data4.62□□□□□ -1.67not detected
CBF5YLR175W MIH1P23748 554 aa4.62□□□□□ -1.67
CBF5YLR175W NDI1P32340 513 aa4.62□□□□□ -1.67
CBF5YLR175W MRS6P32864 603 aaKnown RBP4.62□□□□□ -1.67
CBF5YLR175W BEM3P32873 1128 aa4.62□□□□□ -1.67
CBF5YLR175W MRPL40P36534 297 aa4.62□□□□□ -1.67
CBF5YLR175W OCA5P38738 679 aa4.62□□□□□ -1.67
CBF5YLR175W OSH7P38755 437 aa4.62□□□□□ -1.67
CBF5YLR175W HEM14P40012 539 aa4.62□□□□□ -1.67
CBF5YLR175W YTP1P53584 459 aa4.62□□□□□ -1.67
CBF5YLR175W YNR063WP53749 607 aa4.62□□□□□ -1.67
CBF5YLR175W IPI3P53877 555 aa4.62□□□□□ -1.67
CBF5YLR175W TEP1P53916 434 aa4.62□□□□□ -1.67
CBF5YLR175W YNL058CP53947 316 aa4.62□□□□□ -1.67
CBF5YLR175W CDC14Q00684 551 aa4.62□□□□□ -1.67
CBF5YLR175W RPN4Q03465 531 aa4.62□□□□□ -1.67
CBF5YLR175W FAR8Q05040 523 aa4.62□□□□□ -1.67
CBF5YLR175W LDB18Q07887 179 aa4.62□□□□□ -1.67
CBF5YLR175W NDD1Q08887 554 aa4.62□□□□□ -1.67
CBF5YLR175W FLC1Q08967 793 aa4.62□□□□□ -1.67
CBF5YLR175W PIN2Q12057 282 aa4.62□□□□□ -1.67
CBF5YLR175W NCA2Q12374 616 aa4.62□□□□□ -1.67
CBF5YLR175W RPS9AO13516 197 aaKnown RBP4.61□□□□□ -1.67
CBF5YLR175W TEF1P02994 458 aaKnown RBP4.61□□□□□ -1.67
CBF5YLR175W SRV2P17555 526 aaKnown RBP4.61□□□□□ -1.67
CBF5YLR175W MRPL8P22353 238 aa4.61□□□□□ -1.67
CBF5YLR175W YCL068CP25593 260 aa4.61□□□□□ -1.67
CBF5YLR175W RIM1P32445 135 aaKnown RBP4.61□□□□□ -1.67
CBF5YLR175W PET112P33893 541 aa4.61□□□□□ -1.67
CBF5YLR175W MRPL16P38064 232 aa4.61□□□□□ -1.67
CBF5YLR175W ETR1P38071 380 aa4.61□□□□□ -1.67
CBF5YLR175W YBP1P38315 674 aa4.61□□□□□ -1.67
CBF5YLR175W CRP1P38845 465 aaKnown RBP4.61□□□□□ -1.67
CBF5YLR175W FAA3P39002 694 aa4.61□□□□□ -1.67
CBF5YLR175W DUN1P39009 513 aa4.61□□□□□ -1.67
CBF5YLR175W ASN2P49090 572 aaKnown RBP4.61□□□□□ -1.67
CBF5YLR175W YNR040WP53736 256 aa4.61□□□□□ -1.67
CBF5YLR175W NOP15P53927 220 aaPredicted RBP4.61□□□□□ -1.67
CBF5YLR175W VPS16Q03308 798 aa4.61□□□□□ -1.67
CBF5YLR175W YSH1Q06224 779 aaPredicted RBP4.61□□□□□ -1.67
CBF5YLR175W OPT2Q06593 877 aa4.61□□□□□ -1.67
CBF5YLR175W CMS1Q07897 291 aaKnown RBP4.61□□□□□ -1.67
CBF5YLR175W VHS3Q08438 674 aa4.61□□□□□ -1.67
CBF5YLR175W SLD7Q08457 257 aa4.61□□□□□ -1.67
CBF5YLR175W SGO1Q08490 590 aa4.61□□□□□ -1.67
CBF5YLR175W TRE2Q08693 809 aa4.61□□□□□ -1.67
CBF5YLR175W MCD1Q12158 566 aa4.61□□□□□ -1.67
CBF5YLR175W ATP12P22135 325 aa4.6□□□□□ -1.67
CBF5YLR175W KIN3P22209 435 aa4.6□□□□□ -1.67
CBF5YLR175W PYC2P32327 1180 aaKnown RBP4.6□□□□□ -1.67
CBF5YLR175W POL12P38121 705 aaPredicted RBP4.6□□□□□ -1.67
CBF5YLR175W SEC28P40509 296 aaKnown RBP4.6□□□□□ -1.67
CBF5YLR175W YJL107CP42947 387 aa4.6□□□□□ -1.67
CBF5YLR175W GYP8P43570 497 aa4.6□□□□□ -1.67
CBF5YLR175W YFL012WP43580 148 aa4.6□□□□□ -1.67
CBF5YLR175W TRS85P46944 698 aa4.6□□□□□ -1.67
CBF5YLR175W CCT8P47079 568 aaKnown RBP4.6□□□□□ -1.67
CBF5YLR175W TRF5P48561 642 aaKnown RBP4.6□□□□□ -1.67
CBF5YLR175W AMA1P50082 593 aa4.6□□□□□ -1.67
CBF5YLR175W DOS2P54858 310 aa4.6□□□□□ -1.67
CBF5YLR175W SLU7Q02775 382 aaKnown RBP4.6□□□□□ -1.67
CBF5YLR175W NHX1Q04121 633 aa4.6□□□□□ -1.67
CBF5YLR175W TMN2Q04562 672 aa4.6□□□□□ -1.67
CBF5YLR175W CDC123Q05791 360 aa4.6□□□□□ -1.67
CBF5YLR175W RSC2Q06488 889 aa4.6□□□□□ -1.67
CBF5YLR175W YET3Q07451 203 aa4.6□□□□□ -1.67
CBF5YLR175W SLP1Q12232 587 aa4.6□□□□□ -1.67
CBF5YLR175W YLR046CQ12253 270 aa4.6□□□□□ -1.67
CBF5YLR175W LDB17Q12342 491 aa4.6□□□□□ -1.67
CBF5YLR175W PDH1Q12428 516 aaKnown RBP4.6□□□□□ -1.67
CBF5YLR175W PEX11Q12462 236 aa4.6□□□□□ -1.67
CBF5YLR175W KCS1Q12494 1050 aa4.6□□□□□ -1.67
CBF5YLR175W SSC1P0CS90 654 aaKnown RBP4.59□□□□□ -1.67
CBF5YLR175W ARF2P19146 181 aaKnown RBP4.59□□□□□ -1.67
CBF5YLR175W CLN1P20437 546 aa4.59□□□□□ -1.67
CBF5YLR175W PRE9P23638 258 aaKnown RBP4.59□□□□□ -1.67
CBF5YLR175W YSP3P25036 478 aa4.59□□□□□ -1.67
CBF5YLR175W CDC10P25342 322 aaKnown RBP4.59□□□□□ -1.67
CBF5YLR175W GEX1P25596 615 aa4.59□□□□□ -1.67
CBF5YLR175W MSH2P25847 964 aa4.59□□□□□ -1.67
CBF5YLR175W HRR25P29295 494 aaKnown RBP4.59□□□□□ -1.67
CBF5YLR175W LOS1P33418 1100 aaPredicted RBP4.59□□□□□ -1.67
CBF5YLR175W GEX2P36173 615 aa4.59□□□□□ -1.67
CBF5YLR175W GLY1P37303 387 aaKnown RBP4.59□□□□□ -1.67
CBF5YLR175W RDH54P38086 958 aa4.59□□□□□ -1.67
CBF5YLR175W MRP21P38175 177 aa4.59□□□□□ -1.67
CBF5YLR175W YBR032WP38223 100 aa4.59□□□□□ -1.67
CBF5YLR175W NEM1P38757 446 aa4.59□□□□□ -1.67
CBF5YLR175W MNN1P39106 762 aa4.59□□□□□ -1.67
CBF5YLR175W SEO1P39709 593 aa4.59□□□□□ -1.67
CBF5YLR175W SSP120P39931 234 aaKnown RBP4.59□□□□□ -1.67
CBF5YLR175W DOT6P40059 670 aaKnown RBP4.59□□□□□ -1.67
CBF5YLR175W UBP7P40453 1071 aa4.59□□□□□ -1.67
CBF5YLR175W DSN1P40568 576 aa4.59□□□□□ -1.67
CBF5YLR175W SIP4P46954 829 aa4.59□□□□□ -1.67
CBF5YLR175W AIM23P47015 356 aa4.59□□□□□ -1.67
CBF5YLR175W LIA1P47120 325 aaKnown RBP4.59□□□□□ -1.67
CBF5YLR175W AIM14P53109 570 aa4.59□□□□□ -1.67
CBF5YLR175W FLC3P53121 802 aa4.59□□□□□ -1.67
CBF5YLR175W RCF2P53721 224 aa4.59□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 116.1 ms