RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W ADE3P07245 946 aaKnown RBP2.72□□□□□ -1.97
NIC96YFR002W YIR016WP40572 265 aa2.72□□□□□ -1.97
NIC96YFR002W EAF7P53911 425 aaKnown RBP2.72□□□□□ -1.97
NIC96YFR002W SUB1P54000 292 aaKnown RBP2.72□□□□□ -1.97
NIC96YFR002W MET14Q02196 202 aa2.72□□□□□ -1.97
NIC96YFR002W YPL108WQ02872 168 aaPredicted RBP2.72□□□□□ -1.97
NIC96YFR002W NUP53Q03790 475 aa2.72□□□□□ -1.97
NIC96YFR002W GTB1Q04924 702 aa2.72□□□□□ -1.97
NIC96YFR002W SNA4Q07549 140 aa2.72□□□□□ -1.97
NIC96YFR002W BUD21Q08492 214 aaPredicted RBP2.72□□□□□ -1.97
NIC96YFR002W SRL1Q08673 210 aa2.72□□□□□ -1.97
NIC96YFR002W POL3P15436 1097 aa2.71□□□□□ -1.98
NIC96YFR002W SWC3P31376 625 aa2.71□□□□□ -1.98
NIC96YFR002W APM3P38153 483 aa2.71□□□□□ -1.98
NIC96YFR002W VPS41P38959 992 aa2.71□□□□□ -1.98
NIC96YFR002W TPA1P40032 644 aaKnown RBP2.71□□□□□ -1.98
NIC96YFR002W YPT11P48559 417 aa2.71□□□□□ -1.98
NIC96YFR002W MSS18P08593 268 aa2.71□□□□□ -1.98
NIC96YFR002W SPC72P39723 622 aa2.71□□□□□ -1.98
NIC96YFR002W FUN12P39730 1002 aaKnown RBP2.71□□□□□ -1.98
NIC96YFR002W ECM22Q05958 814 aaPredicted RBP2.71□□□□□ -1.98
NIC96YFR002W IWR1Q07532 353 aaPredicted RBP2.71□□□□□ -1.98
NIC96YFR002W UBX3Q12229 455 aa2.71□□□□□ -1.98
NIC96YFR002W PDR5P33302 1511 aaKnown RBP2.71□□□□□ -1.98
NIC96YFR002W PDR11P40550 1411 aa2.7□□□□□ -1.98
NIC96YFR002W GAL1P04385 528 aa2.7□□□□□ -1.98
NIC96YFR002W BIK1P11709 440 aa2.7□□□□□ -1.98
NIC96YFR002W PCT1P13259 424 aa2.7□□□□□ -1.98
NIC96YFR002W MSS51P32335 436 aa2.7□□□□□ -1.98
NIC96YFR002W OCT1P35999 772 aa2.7□□□□□ -1.98
NIC96YFR002W MSY1P48527 492 aa2.7□□□□□ -1.98
NIC96YFR002W CPR6P53691 371 aaKnown RBP2.7□□□□□ -1.98
NIC96YFR002W PDR8Q06149 701 aa2.7□□□□□ -1.98
NIC96YFR002W BUD7Q08754 746 aa2.7□□□□□ -1.98
NIC96YFR002W RVB2Q12464 471 aaKnown RBP2.7□□□□□ -1.98
NIC96YFR002W PIF1P07271 859 aa2.7□□□□□ -1.98
NIC96YFR002W ARP2P32381 391 aaKnown RBP2.7□□□□□ -1.98
NIC96YFR002W SCO2P38072 301 aa2.7□□□□□ -1.98
NIC96YFR002W IMA1P53051 589 aa2.7□□□□□ -1.98
NIC96YFR002W ATG21Q02887 496 aa2.7□□□□□ -1.98
NIC96YFR002W VPS72Q03388 795 aa2.7□□□□□ -1.98
NIC96YFR002W PIG1Q06216 648 aa2.7□□□□□ -1.98
NIC96YFR002W MLC2Q06580 163 aa2.7□□□□□ -1.98
NIC96YFR002W MLH2Q07980 695 aa2.7□□□□□ -1.98
NIC96YFR002W DSE3Q08729 430 aa2.7□□□□□ -1.98
NIC96YFR002W PET122P10355 254 aa2.69□□□□□ -1.98
NIC96YFR002W YCR043CP25361 127 aa2.69□□□□□ -1.98
NIC96YFR002W YKL133CP36066 463 aa2.69□□□□□ -1.98
NIC96YFR002W YNL144CP53907 740 aa2.69□□□□□ -1.98
NIC96YFR002W BOP3P53958 396 aa2.69□□□□□ -1.98
NIC96YFR002W YDR109CQ04585 715 aa2.69□□□□□ -1.98
NIC96YFR002W YFL068WP0CX99 160 aa2.69□□□□□ -1.98
NIC96YFR002W YLL066W-AP0CY00 160 aa2.69□□□□□ -1.98
NIC96YFR002W YLL067W-AP0CY01 160 aa2.69□□□□□ -1.98
NIC96YFR002W PHM8P40025 321 aa2.69□□□□□ -1.98
NIC96YFR002W HIS6P40545 261 aa2.69□□□□□ -1.98
NIC96YFR002W UBX6P47049 396 aa2.69□□□□□ -1.98
NIC96YFR002W YMR034CQ05131 434 aaPredicted RBP2.69□□□□□ -1.98
NIC96YFR002W GSH2Q08220 491 aa2.69□□□□□ -1.98
NIC96YFR002W GCN2P15442 1659 aa2.68□□□□□ -1.98
NIC96YFR002W RPL42AP0CX27 106 aaKnown RBP2.68□□□□□ -1.98
NIC96YFR002W RPL42BP0CX28 106 aaKnown RBP2.68□□□□□ -1.98
NIC96YFR002W YSP3P25036 478 aa2.68□□□□□ -1.98
NIC96YFR002W YBR138CP38277 524 aa2.68□□□□□ -1.98
NIC96YFR002W ARC40P38328 384 aaKnown RBP2.68□□□□□ -1.98
NIC96YFR002W YGL036WP53185 909 aaPredicted RBP2.68□□□□□ -1.98
NIC96YFR002W STP3Q05937 343 aa2.68□□□□□ -1.98
NIC96YFR002W HIM1Q06674 414 aa2.68□□□□□ -1.98
NIC96YFR002W MCH4Q08268 501 aa2.68□□□□□ -1.98
NIC96YFR002W GPA1P08539 472 aa2.68□□□□□ -1.98
NIC96YFR002W YML003WP0CF16 290 aa2.68□□□□□ -1.98
NIC96YFR002W RFA2P26754 273 aaKnown RBP2.68□□□□□ -1.98
NIC96YFR002W TES1P41903 349 aaKnown RBP2.68□□□□□ -1.98
NIC96YFR002W ADE16P54113 591 aaKnown RBP2.68□□□□□ -1.98
NIC96YFR002W BAG7Q12128 409 aa2.68□□□□□ -1.98
NIC96YFR002W GCS1P35197 352 aa2.67□□□□□ -1.98
NIC96YFR002W GEX2P36173 615 aa2.67□□□□□ -1.98
NIC96YFR002W MTG1Q03151 367 aaPredicted RBP2.67□□□□□ -1.98
NIC96YFR002W CAC2Q04199 468 aa2.67□□□□□ -1.98
NIC96YFR002W FRE3Q08905 711 aa2.67□□□□□ -1.98
NIC96YFR002W YER145C-AA0A023PYF4 145 aa2.67□□□□□ -1.98
NIC96YFR002W PTP2P29461 750 aa2.67□□□□□ -1.98
NIC96YFR002W GRX7P38068 203 aa2.67□□□□□ -1.98
NIC96YFR002W MAF1P41910 395 aa2.67□□□□□ -1.98
NIC96YFR002W NDD1Q08887 554 aa2.67□□□□□ -1.98
NIC96YFR002W CFT1Q06632 1357 aaKnown RBP2.66□□□□□ -1.98
NIC96YFR002W MIS1P09440 975 aaKnown RBP2.66□□□□□ -1.98
NIC96YFR002W LRE1P25579 583 aaKnown RBP2.66□□□□□ -1.98
NIC96YFR002W FSH1P38777 243 aaKnown RBP2.66□□□□□ -1.98
NIC96YFR002W DJP1P40564 432 aa2.66□□□□□ -1.98
NIC96YFR002W YLR112WQ12130 139 aa2.66□□□□□ -1.98
NIC96YFR002W POM152P39685 1337 aa2.66□□□□□ -1.98
NIC96YFR002W YSP2Q06681 1438 aa2.66□□□□□ -1.98
NIC96YFR002W YCR006CP25350 157 aa2.66□□□□□ -1.98
NIC96YFR002W EXO84P38261 753 aa2.66□□□□□ -1.98
NIC96YFR002W PUG1P40100 303 aa2.66□□□□□ -1.98
NIC96YFR002W ZAP1P47043 880 aa2.66□□□□□ -1.98
NIC96YFR002W ECM16Q04217 1267 aaKnown RBP2.66□□□□□ -1.98
NIC96YFR002W ATG23Q06671 453 aa2.66□□□□□ -1.98
NIC96YFR002W NEW1Q08972 1196 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms