RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	SEC18	P18759	758 aa	Known RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	KGD1	P20967	1014 aa	Known RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	UBC1	P21734	215 aa	Known RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	PRR1	P28708	518 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	PRP21	P32524	280 aa	Predicted RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	DUG2	P38149	878 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	OPY1	P38271	328 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	COS111	P38308	924 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	SMF2	P38778	549 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPH1	P39956	796 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	ACA1	P39970	489 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	ELP2	P42935	788 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	CTF18	P49956	741 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	MIC26	P50087	233 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	PKP2	P53170	491 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	DYN2	Q02647	92 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	ISU1	Q03020	165 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	GAS2	Q06135	555 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	NOC4	Q06512	552 aa	Predicted RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	YOL075C	Q08234	1294 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	MET7	Q08645	548 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	PCD1	Q12524	340 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	SWR1	Q05471	1514 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPN13	O13563	156 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	TCP1	P12612	559 aa	Known RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	HAP3	P13434	144 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	DAP2	P18962	818 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	HSP60	P19882	572 aa	Known RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	PEX1	P24004	1043 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	ELF1	P36053	145 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	ECM10	P39987	644 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	IRC22	P40006	225 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	MEP1	P40260	492 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	ULA1	Q12059	462 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	YLR050C	Q12155	161 aa	Known RBP	4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	REC8	Q12188	680 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	YDL199C	Q12407	687 aa		4.54	□□□□□ -1.68
YDR261C-D	YDR261C-D	RIT1	P23796	513 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	ITR1	P30605	584 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	HMT1	P38074	348 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
YDR261C-D	YDR261C-D	EAF6	P47128	113 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	HFM1	P51979	1187 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	RAI1	P53063	387 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	REG1	Q00816	1014 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	ROY1	Q04847	553 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	NEJ1	Q06148	342 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	SYT1	Q06836	1226 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	LAP2	Q10740	671 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	GRX6	Q12438	231 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	NUP145	P49687	1317 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	CCP1	P00431	361 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	PET54	P10834	293 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	KTR1	P27810	393 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	FRD1	P32614	470 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	ETR1	P38071	380 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	LSM2	P38203	95 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	ALP1	P38971	573 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	SCS2	P40075	244 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	ACS1	Q01574	713 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	PET117	Q02771	107 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	HPT1	Q04178	221 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	PRM6	Q04705	352 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	THP2	O13539	261 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	TRP4	P07285	380 aa	Predicted RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	PMR1	P13586	950 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	UTR1	P21373	530 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	LCB1	P25045	558 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	PTC7	P38797	343 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	YEL057C	P39983	233 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	YJR008W	P47085	338 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	SSY1	Q03770	852 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	HMO1	Q03973	246 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	RDI1	Q12434	202 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	PBS2	P08018	668 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	HYP2	P23301	157 aa	Known RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	AGP1	P25376	633 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	KNS1	P32350	737 aa	Predicted RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	RFC5	P38251	354 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	RGD1	P38339	666 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	DUN1	P39009	513 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	FMP33	P46998	180 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	YGL101W	P53144	215 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPL34A	P87262	121 aa	Predicted RBP	4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	ARP10	Q04549	284 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	ATG34	Q12292	412 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	TUS1	Q06412	1307 aa		4.53	□□□□□ -1.68
YDR261C-D	YDR261C-D	ATP6	P00854	259 aa		4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	ADH4	P10127	382 aa		4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	NHP6A	P11632	93 aa	Known RBP	4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	CBR1	P38626	284 aa	Known RBP	4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	STL1	P39932	569 aa		4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	STB1	P42845	420 aa		4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	AAD10	P47182	288 aa		4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	FOL2	P51601	243 aa	Known RBP	4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	YPT32	P51996	222 aa	Known RBP	4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	YGL036W	P53185	909 aa	Predicted RBP	4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	ESBP6	P53918	673 aa		4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	VPS28	Q02767	242 aa		4.52	□□□□□ -1.69
YDR261C-D	YDR261C-D	ERO1	Q03103	563 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms