RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C ETR1P38071 380 aa4.5□□□□□ -1.69
PRP28YDR243C BMT2P38278 337 aa4.5□□□□□ -1.69
PRP28YDR243C CEM1P39525 442 aa4.5□□□□□ -1.69
PRP28YDR243C SAW1P39735 261 aa4.5□□□□□ -1.69
PRP28YDR243C UPF3P48412 387 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C FOL2P51601 243 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C DID2P69771 204 aa4.5□□□□□ -1.69
PRP28YDR243C ERO1Q03103 563 aa4.5□□□□□ -1.69
PRP28YDR243C ATG16Q03818 150 aa4.5□□□□□ -1.69
PRP28YDR243C SMP3Q04174 516 aa4.5□□□□□ -1.69
PRP28YDR243C CAB1Q04430 367 aa4.5□□□□□ -1.69
PRP28YDR243C GAD1Q04792 585 aa4.5□□□□□ -1.69
PRP28YDR243C VTA1Q06263 330 aa4.5□□□□□ -1.69
PRP28YDR243C YPR196WQ06595 470 aa4.5□□□□□ -1.69
PRP28YDR243C VIP1Q06685 1146 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C MUM3Q08750 479 aa4.5□□□□□ -1.69
PRP28YDR243C NEW1Q08972 1196 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C REC8Q12188 680 aa4.5□□□□□ -1.69
PRP28YDR243C FMP16Q12497 93 aa4.5□□□□□ -1.69
PRP28YDR243C ATG11Q12527 1178 aa4.5□□□□□ -1.69
PRP28YDR243C YDR461C-AQ2V2P7 80 aa4.5□□□□□ -1.69
PRP28YDR243C YBR298C-AQ8TGK4 73 aa4.5□□□□□ -1.69
PRP28YDR243C VCX1Q99385 411 aa4.5□□□□□ -1.69
PRP28YDR243C CBP2P03874 630 aaPredicted RBP4.5□□□□□ -1.69
PRP28YDR243C BI4P03879 638 aa4.5□□□□□ -1.69
PRP28YDR243C THS1P04801 734 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C ARG3P05150 338 aa4.5□□□□□ -1.69
PRP28YDR243C RPP1AP05318 106 aaPredicted RBP4.5□□□□□ -1.69
PRP28YDR243C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
PRP28YDR243C GCD1P09032 578 aaPredicted RBP4.5□□□□□ -1.69
PRP28YDR243C CHS2P14180 963 aa4.5□□□□□ -1.69
PRP28YDR243C PRP28P23394 588 aa4.5□□□□□ -1.69
PRP28YDR243C SRO9P25567 434 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C YCR101CP25607 182 aa4.5□□□□□ -1.69
PRP28YDR243C NAM9P27929 486 aa4.5□□□□□ -1.69
PRP28YDR243C MCM4P30665 933 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C FRD1P32614 470 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C RRN6P32786 894 aa4.5□□□□□ -1.69
PRP28YDR243C SRP101P32916 621 aa4.5□□□□□ -1.69
PRP28YDR243C SPT10P35208 640 aa4.5□□□□□ -1.69
PRP28YDR243C HES1P35843 434 aa4.5□□□□□ -1.69
PRP28YDR243C ANR2P36090 516 aaPredicted RBP4.5□□□□□ -1.69
PRP28YDR243C ADE17P38009 592 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C CDS1P38221 457 aa4.5□□□□□ -1.69
PRP28YDR243C DED81P38707 554 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C YHL017WP38745 532 aa4.5□□□□□ -1.69
PRP28YDR243C ERP5P38819 212 aa4.5□□□□□ -1.69
PRP28YDR243C STM1P39015 273 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C FRT2P39734 528 aa4.5□□□□□ -1.69
PRP28YDR243C IES5P40060 125 aa4.5□□□□□ -1.69
PRP28YDR243C CIN5P40917 295 aa4.5□□□□□ -1.69
PRP28YDR243C COS4P43542 379 aa4.5□□□□□ -1.69
PRP28YDR243C YFR018CP43599 363 aa4.5□□□□□ -1.69
PRP28YDR243C IRC5P43610 853 aa4.5□□□□□ -1.69
PRP28YDR243C YJR141WP47172 347 aaPredicted RBP4.5□□□□□ -1.69
PRP28YDR243C COS5P47187 383 aa4.5□□□□□ -1.69
PRP28YDR243C MSE1P48525 536 aa4.5□□□□□ -1.69
PRP28YDR243C PRP24P49960 444 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C RAI1P53063 387 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C NUT1P53114 1132 aa4.5□□□□□ -1.69
PRP28YDR243C MNP1P53163 194 aaPredicted RBP4.5□□□□□ -1.69
PRP28YDR243C COS1P53822 381 aa4.5□□□□□ -1.69
PRP28YDR243C SDH1Q00711 640 aa4.5□□□□□ -1.69
PRP28YDR243C NHP10Q03435 203 aa4.5□□□□□ -1.69
PRP28YDR243C YDR249CQ03787 373 aa4.5□□□□□ -1.69
PRP28YDR243C YMR027WQ04371 470 aa4.5□□□□□ -1.69
PRP28YDR243C HCR1Q05775 265 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C CRR1Q05790 422 aa4.5□□□□□ -1.69
PRP28YDR243C YPR091CQ06833 770 aa4.5□□□□□ -1.69
PRP28YDR243C BRE4Q07660 1125 aa4.5□□□□□ -1.69
PRP28YDR243C SSP2Q08646 371 aa4.5□□□□□ -1.69
PRP28YDR243C LAG2Q92325 660 aa4.5□□□□□ -1.69
PRP28YDR243C YPT6Q99260 215 aa4.5□□□□□ -1.69
PRP28YDR243C LTE1P07866 1435 aa4.49□□□□□ -1.69
PRP28YDR243C RPN13O13563 156 aa4.49□□□□□ -1.69
PRP28YDR243C RPL25P04456 142 aaKnown RBP4.49□□□□□ -1.69
PRP28YDR243C MRP13P12686 339 aa4.49□□□□□ -1.69
PRP28YDR243C ATR1P13090 542 aa4.49□□□□□ -1.69
PRP28YDR243C HOM2P13663 365 aaKnown RBP4.49□□□□□ -1.69
PRP28YDR243C RGP1P16664 663 aa4.49□□□□□ -1.69
PRP28YDR243C TRX1P22217 103 aaKnown RBP4.49□□□□□ -1.69
PRP28YDR243C ICL1P28240 557 aaPredicted RBP4.49□□□□□ -1.69
PRP28YDR243C NTR2P36118 322 aaPredicted RBP4.49□□□□□ -1.69
PRP28YDR243C NUP133P36161 1157 aa4.49□□□□□ -1.69
PRP28YDR243C SLM4P38247 162 aa4.49□□□□□ -1.69
PRP28YDR243C YBR197CP38306 217 aa4.49□□□□□ -1.69
PRP28YDR243C YAP1801P38856 637 aa4.49□□□□□ -1.69
PRP28YDR243C GTT1P40582 234 aa4.49□□□□□ -1.69
PRP28YDR243C YGR210CP42942 411 aa4.49□□□□□ -1.69
PRP28YDR243C NMD5P46970 1048 aa4.49□□□□□ -1.69
PRP28YDR243C LSB1P53281 241 aa4.49□□□□□ -1.69
PRP28YDR243C ALD6P54115 500 aaKnown RBP4.49□□□□□ -1.69
PRP28YDR243C SED5Q01590 340 aa4.49□□□□□ -1.69
PRP28YDR243C MUK1Q02866 612 aa4.49□□□□□ -1.69
PRP28YDR243C ELP3Q02908 557 aaKnown RBP4.49□□□□□ -1.69
PRP28YDR243C YMR279CQ03263 540 aa4.49□□□□□ -1.69
PRP28YDR243C ACL4Q03771 387 aa4.49□□□□□ -1.69
PRP28YDR243C TIF35Q04067 274 aaKnown RBP4.49□□□□□ -1.69
PRP28YDR243C DLT1Q04216 342 aa4.49□□□□□ -1.69
PRP28YDR243C PUN1Q06991 263 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms