RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C COQ6P53318 479 aa3.64□□□□□ -1.83
RRP42YDL111C YNL092WP53934 400 aa3.64□□□□□ -1.83
RRP42YDL111C YPL071CQ02864 156 aa3.64□□□□□ -1.83
RRP42YDL111C NGL3Q03210 505 aa3.64□□□□□ -1.83
RRP42YDL111C TRS23Q03784 219 aa3.64□□□□□ -1.83
RRP42YDL111C CIR2Q08822 631 aa3.64□□□□□ -1.83
RRP42YDL111C TCO89Q08921 799 aa3.64□□□□□ -1.83
RRP42YDL111C YPL191CQ08930 360 aa3.64□□□□□ -1.83
RRP42YDL111C SNU66Q12420 587 aaPredicted RBP3.64□□□□□ -1.83
RRP42YDL111C PGA3Q12746 312 aaKnown RBP3.64□□□□□ -1.83
RRP42YDL111C CBS1P14066 229 aa3.63□□□□□ -1.83
RRP42YDL111C KAR3P17119 729 aa3.63□□□□□ -1.83
RRP42YDL111C PWP1P21304 576 aaKnown RBP3.63□□□□□ -1.83
RRP42YDL111C AMD2P22580 549 aa3.63□□□□□ -1.83
RRP42YDL111C RFA2P26754 273 aaKnown RBP3.63□□□□□ -1.83
RRP42YDL111C PEP3P27801 918 aa3.63□□□□□ -1.83
RRP42YDL111C PDB1P32473 366 aaKnown RBP3.63□□□□□ -1.83
RRP42YDL111C VMA8P32610 256 aaKnown RBP3.63□□□□□ -1.83
RRP42YDL111C AUR1P36107 401 aaPredicted RBP3.63□□□□□ -1.83
RRP42YDL111C AGP2P38090 596 aa3.63□□□□□ -1.83
RRP42YDL111C LSM5P40089 93 aaKnown RBP3.63□□□□□ -1.83
RRP42YDL111C RGI2P40188 164 aa3.63□□□□□ -1.83
RRP42YDL111C RPN11P43588 306 aaKnown RBP3.63□□□□□ -1.83
RRP42YDL111C UBX6P47049 396 aa3.63□□□□□ -1.83
RRP42YDL111C MSY1P48527 492 aa3.63□□□□□ -1.83
RRP42YDL111C YML6P51998 286 aa3.63□□□□□ -1.83
RRP42YDL111C SEC5P89102 971 aa3.63□□□□□ -1.83
RRP42YDL111C SXM1Q04175 944 aaKnown RBP3.63□□□□□ -1.83
RRP42YDL111C YLR352WQ06479 807 aa3.63□□□□□ -1.83
RRP42YDL111C GRC3Q07845 632 aa3.63□□□□□ -1.83
RRP42YDL111C LCB4Q12246 624 aa3.63□□□□□ -1.83
RRP42YDL111C RTN2Q12443 393 aa3.63□□□□□ -1.83
RRP42YDL111C ZPS1Q12512 249 aa3.63□□□□□ -1.83
RRP42YDL111C YOR019WQ99248 730 aa3.63□□□□□ -1.83
RRP42YDL111C HSP82P02829 709 aaKnown RBP3.62□□□□□ -1.83
RRP42YDL111C CPA2P03965 1118 aaKnown RBP3.62□□□□□ -1.83
RRP42YDL111C MET17P06106 444 aa3.62□□□□□ -1.83
RRP42YDL111C PDX1P16451 410 aa3.62□□□□□ -1.83
RRP42YDL111C RPC53P25441 422 aa3.62□□□□□ -1.83
RRP42YDL111C ORC2P32833 620 aa3.62□□□□□ -1.83
RRP42YDL111C BYE1P36106 594 aa3.62□□□□□ -1.83
RRP42YDL111C AAP1P37898 856 aaKnown RBP3.62□□□□□ -1.83
RRP42YDL111C MAL33P38157 468 aa3.62□□□□□ -1.83
RRP42YDL111C UBP13P38187 747 aa3.62□□□□□ -1.83
RRP42YDL111C ERC1P38767 581 aa3.62□□□□□ -1.83
RRP42YDL111C JHD1P40034 492 aa3.62□□□□□ -1.83
RRP42YDL111C ROK1P45818 564 aaPredicted RBP3.62□□□□□ -1.83
RRP42YDL111C NPA3P47122 385 aa3.62□□□□□ -1.83
RRP42YDL111C MRK1P50873 501 aa3.62□□□□□ -1.83
RRP42YDL111C RSC1P53236 928 aa3.62□□□□□ -1.83
RRP42YDL111C YGR066CP53242 292 aa3.62□□□□□ -1.83
RRP42YDL111C COG2P53271 262 aa3.62□□□□□ -1.83
RRP42YDL111C YAT1P80235 687 aa3.62□□□□□ -1.83
RRP42YDL111C UBP16Q02863 499 aa3.62□□□□□ -1.83
RRP42YDL111C CRN1Q06440 651 aa3.62□□□□□ -1.83
RRP42YDL111C YEH1Q07804 573 aa3.62□□□□□ -1.83
RRP42YDL111C GPN2Q08726 347 aaPredicted RBP3.62□□□□□ -1.83
RRP42YDL111C YJR112W-AQ3E743 109 aa3.62□□□□□ -1.83
RRP42YDL111C COX1P00401 534 aa3.61□□□□□ -1.83
RRP42YDL111C DFR1P07807 211 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
RRP42YDL111C HOM3P10869 527 aa3.61□□□□□ -1.83
RRP42YDL111C RNR3P21672 869 aaKnown RBP3.61□□□□□ -1.83
RRP42YDL111C YSP3P25036 478 aa3.61□□□□□ -1.83
RRP42YDL111C LAC1P28496 418 aa3.61□□□□□ -1.83
RRP42YDL111C VBA2P38358 474 aaKnown RBP3.61□□□□□ -1.83
RRP42YDL111C MUP3P38734 546 aa3.61□□□□□ -1.83
RRP42YDL111C MTG2P38860 518 aa3.61□□□□□ -1.83
RRP42YDL111C SEC31P38968 1273 aaKnown RBP3.61□□□□□ -1.83
RRP42YDL111C SEC24P40482 926 aaKnown RBP3.61□□□□□ -1.83
RRP42YDL111C OPT1P40897 799 aa3.61□□□□□ -1.83
RRP42YDL111C STR3P53101 465 aaKnown RBP3.61□□□□□ -1.83
RRP42YDL111C CPR8P53728 308 aa3.61□□□□□ -1.83
RRP42YDL111C YML119WQ03208 357 aa3.61□□□□□ -1.83
RRP42YDL111C RCF1Q03713 159 aa3.61□□□□□ -1.83
RRP42YDL111C SWA2Q06677 668 aa3.61□□□□□ -1.83
RRP42YDL111C PSR1Q07800 427 aa3.61□□□□□ -1.83
RRP42YDL111C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
RRP42YDL111C YPL272CQ08984 517 aa3.61□□□□□ -1.83
RRP42YDL111C MDM20Q12387 796 aaKnown RBP3.61□□□□□ -1.83
RRP42YDL111C AI5_ALPHAQ9ZZX1 630 aa3.61□□□□□ -1.83
RRP42YDL111C HOM2P13663 365 aaKnown RBP3.6□□□□□ -1.83
RRP42YDL111C POL4P25615 582 aa3.6□□□□□ -1.83
RRP42YDL111C YIH1P25637 258 aa3.6□□□□□ -1.83
RRP42YDL111C CDC60P26637 1090 aaKnown RBP3.6□□□□□ -1.83
RRP42YDL111C MRPL9P31334 269 aa3.6□□□□□ -1.83
RRP42YDL111C DBF4P32325 704 aa3.6□□□□□ -1.83
RRP42YDL111C GDA1P32621 518 aa3.6□□□□□ -1.83
RRP42YDL111C NTR2P36118 322 aaPredicted RBP3.6□□□□□ -1.83
RRP42YDL111C REG2P38232 338 aa3.6□□□□□ -1.83
RRP42YDL111C SRP72P38688 640 aaKnown RBP3.6□□□□□ -1.83
RRP42YDL111C MET28P40573 187 aa3.6□□□□□ -1.83
RRP42YDL111C SWP82P43554 623 aa3.6□□□□□ -1.83
RRP42YDL111C YGL036WP53185 909 aaPredicted RBP3.6□□□□□ -1.83
RRP42YDL111C NNF2P53253 936 aa3.6□□□□□ -1.83
RRP42YDL111C IST1P53843 298 aaPredicted RBP3.6□□□□□ -1.83
RRP42YDL111C JJJ1P53863 590 aa3.6□□□□□ -1.83
RRP42YDL111C AAT1Q01802 451 aa3.6□□□□□ -1.83
RRP42YDL111C YML037CQ03703 340 aa3.6□□□□□ -1.83
RRP42YDL111C YMR155WQ03795 547 aa3.6□□□□□ -1.83
RRP42YDL111C PLM2Q04383 521 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms