RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 PDZD3Q86UT5 571 aa6.16□□□□□ -1.42
CDRT1-208ENST00000630868 DDX42Q86XP3 938 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDRT1-208ENST00000630868 ZNF526Q8TF50 670 aaPredicted RBP6.16□□□□□ -1.42
CDRT1-208ENST00000630868 CHAC2Q8WUX2 184 aa6.16□□□□□ -1.42
CDRT1-208ENST00000630868 TMEM40Q8WWA1 233 aa6.16□□□□□ -1.42
CDRT1-208ENST00000630868 PMM1Q92871 262 aa6.16□□□□□ -1.42
CDRT1-208ENST00000630868 TSR2Q969E8 191 aaKnown RBP6.16□□□□□ -1.42
CDRT1-208ENST00000630868 TM9SF2Q99805 663 aa6.16□□□□□ -1.42
CDRT1-208ENST00000630868 SPATA9Q9BWV2 254 aa6.16□□□□□ -1.42
CDRT1-208ENST00000630868 NDFIP2Q9NV92 336 aa6.16□□□□□ -1.42
CDRT1-208ENST00000630868 SOX13Q9UN79 622 aa6.16□□□□□ -1.42
CDRT1-208ENST00000630868 CLTCL1P53675 1640 aa6.16□□□□□ -1.42
CDRT1-208ENST00000630868 BNIP3LO60238 219 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 HTR3BO95264 441 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 ACRP10323 421 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 FOXB2Q5VYV0 432 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 EEPD1Q7L9B9 569 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 RNF180Q86T96 592 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 UNC5CLQ8IV45 518 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 UBR7Q8N806 425 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 BSNDQ8WZ55 320 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 ABHD17AQ96GS6 310 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 MARK1Q9P0L2 795 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 MAGEC2Q9UBF1 373 aaPredicted RBP6.15□□□□□ -1.42
CDRT1-208ENST00000630868 PCDHB10Q9UN67 800 aa6.15□□□□□ -1.42
CDRT1-208ENST00000630868 LTBP3Q9NS15 1303 aa6.15□□□□□ -1.43
CDRT1-208ENST00000630868 TECPR2O15040 1411 aa6.15□□□□□ -1.43
CDRT1-208ENST00000630868 PRC1O43663 620 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 SUSD5O60279 629 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 PDE8AO60658 829 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 DNAJA2O60884 412 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 PABPC4Q13310 644 aaKnown RBP eCLIP6.14□□□□□ -1.43
CDRT1-208ENST00000630868 HGSNATQ68CP4 663 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 OVOS1Q6IE37 1185 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 VHLLQ6RSH7 139 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 RIPOR1Q6ZS17 1223 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 TRIM46Q7Z4K8 759 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 DEFB132Q7Z7B7 95 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 ZSCAN1Q8NBB4 408 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 MORC4Q8TE76 937 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 C8orf48Q96LL4 319 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 EFCC1Q9HA90 598 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 CORINQ9Y5Q5 1042 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 RPGRIP1LQ68CZ1 1315 aa6.14□□□□□ -1.43
CDRT1-208ENST00000630868 BRWD3Q6RI45 1802 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 GSG1L2A8MUP6 293 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 EIF2AK2P19525 551 aaKnown RBP6.13□□□□□ -1.43
CDRT1-208ENST00000630868 PRR20EP86478 221 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 PRR20CP86479 221 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 PRR20DP86480 221 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 PRR20BP86481 221 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 PRR20AP86496 221 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 CEP135Q66GS9 1140 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 MAP1SQ66K74 1059 aaPredicted RBP6.13□□□□□ -1.43
CDRT1-208ENST00000630868 UNC5AQ6ZN44 842 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 TAB3Q8N5C8 712 aaPredicted RBP6.13□□□□□ -1.43
CDRT1-208ENST00000630868 ZBTB38Q8NAP3 1195 aaPredicted RBP6.13□□□□□ -1.43
CDRT1-208ENST00000630868 KLHL6Q8WZ60 621 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 EXOC2Q96KP1 924 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 EMILIN2Q9BXX0 1053 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 NUCKS1Q9H1E3 243 aaKnown RBP6.13□□□□□ -1.43
CDRT1-208ENST00000630868 CAAP1Q9H8G2 361 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 SPATA31A3Q5VYP0 1347 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 PRR36Q9H6K5 1346 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 LRPPRCP42704 1394 aaKnown RBP6.13□□□□□ -1.43
CDRT1-208ENST00000630868 KIF1BO60333 1816 aa6.13□□□□□ -1.43
CDRT1-208ENST00000630868 CCDC144AA2RUR9 1427 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 FAM86C2PA6NEL3 165 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 ESRRAP11474 423 aaPredicted RBP6.12□□□□□ -1.43
CDRT1-208ENST00000630868 NAIPQ13075 1403 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 SCARF1Q14162 830 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 NCAPHQ15003 741 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 VPS72Q15906 364 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 LONRF2Q1L5Z9 754 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 LRRFIP1Q32MZ4 808 aaKnown RBP6.12□□□□□ -1.43
CDRT1-208ENST00000630868 WIPI1Q5MNZ9 446 aaPredicted RBP6.12□□□□□ -1.43
CDRT1-208ENST00000630868 PERM1Q5SV97 790 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 DIEXFQ68CQ4 756 aaKnown RBP6.12□□□□□ -1.43
CDRT1-208ENST00000630868 USP32Q8NFA0 1604 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 NCOA5Q9HCD5 579 aaKnown RBP6.12□□□□□ -1.43
CDRT1-208ENST00000630868 DNAJB12Q9NXW2 375 aaKnown RBP6.12□□□□□ -1.43
CDRT1-208ENST00000630868 CACNA2D2Q9NY47 1150 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 TCEAL9Q9UHQ7 104 aa6.12□□□□□ -1.43
CDRT1-208ENST00000630868 PPLO60437 1756 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 NWD2Q9ULI1 1742 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 ABCC11Q96J66 1382 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 GFRA2O00451 464 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 ALDH1L1O75891 902 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 SMNDC1O75940 238 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDRT1-208ENST00000630868 GHRHP01286 108 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 GSTP1P09211 210 aaKnown RBP6.11□□□□□ -1.43
CDRT1-208ENST00000630868 NME1P15531 152 aaKnown RBP6.11□□□□□ -1.43
CDRT1-208ENST00000630868 L1CAMP32004 1257 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 SOX5P35711 763 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 RHBDL3P58872 404 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 NFKB2Q00653 900 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 LRRC41Q15345 812 aa6.11□□□□□ -1.43
CDRT1-208ENST00000630868 TTF1Q15361 905 aaPredicted RBP6.11□□□□□ -1.43
CDRT1-208ENST00000630868 CT47A1Q5JQC4 288 aaPredicted RBP6.11□□□□□ -1.43
CDRT1-208ENST00000630868 WDR75Q8IWA0 830 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms