RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 GPR37L1O60883 481 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 ENTPD3O75355 529 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 GSPT1P15170 499 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 GRM1Q13255 1194 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 TNFAIP1Q13829 316 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 LDLRAD1Q5T700 205 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 C2orf69Q8N8R5 385 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 TGFBRAP1Q8WUH2 860 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 OSBP2Q969R2 916 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 OSBPL5Q9H0X9 879 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 OSBPL3Q9H4L5 887 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 TMOD2Q9NZR1 351 aa11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 ANGEL1Q9UNK9 670 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 FCF1Q9Y324 198 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 MYH7P12883 1935 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 MAGEB6P1A0A0J9YX57 407 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 M0R2C6 588 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 MBD4O95243 580 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 TNNI2P48788 182 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 RRP1BQ14684 758 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 UBE3CQ15386 1083 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 MAP3K11Q16584 847 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 SHROOM1Q2M3G4 852 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 RASAL3Q86YV0 1011 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 SDR42E1Q8WUS8 393 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 HHIPL1Q96JK4 782 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 CAPNS2Q96L46 248 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 DNAJC18Q9H819 358 aa11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 SAP30BPQ9UHR5 308 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-219ENST00000576713 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 ERC2O15083 957 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 FOXP2O15409 715 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 RNF113AO15541 343 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 IGSF3O75054 1194 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 BAG3O95817 575 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 INPP5BP32019 993 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 JAG1P78504 1218 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 SUPT20HL1Q3ZLR7 823 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 PTCRAQ6ISU1 281 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 RGMBQ6NW40 437 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 PPP1R18Q6NYC8 613 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.581e-6■■■■■ 29.6
NPLOC4-219ENST00000576713 ZKSCAN4Q969J2 545 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 CSRNP1Q96S65 589 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 PALD1Q9ULE6 856 aa11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 COL2A1P02458 1487 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-219ENST00000576713 NAV1Q8NEY1 1877 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 CYP2D7A0A087X1C5 515 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 PHF20L1A8MW92 1017 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 CYP2D6P10635 497 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 GGCXP38435 758 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 ABL2P42684 1182 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 ZNF157P51786 506 aaPredicted RBP11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 FKBP1BP68106 108 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 MAP3K10Q02779 954 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 VGLL4Q14135 290 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 CCDC129Q6ZRS4 1044 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 FAM227BQ96M60 508 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 FSD1Q9BTV5 496 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.41□□□□□ -0.583e-8■■□□□ 12.8
NPLOC4-219ENST00000576713 SNCAIPQ9Y6H5 919 aa11.41□□□□□ -0.58
NPLOC4-219ENST00000576713 A0A0D9SFI3 127 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 FOXN1O15353 648 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 NF2P35240 595 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 ECE1P42892 770 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 PLCD1P51178 756 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 ZMYM1Q5SVZ6 1142 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 COL13A1Q5TAT6 717 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 CENPQQ7L2Z9 268 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 ARMC9Q7Z3E5 817 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 CCDC84Q86UT8 332 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 ZSCAN29Q8IWY8 852 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 APPBP2Q92624 585 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 EVI5LQ96CN4 794 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 WRNIP1Q96S55 665 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 STRBPQ96SI9 672 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 NOL10Q9BSC4 688 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 IL25Q9H293 177 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 ELP3Q9H9T3 547 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 EPB41L4AQ9HCS5 686 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 DCP1AQ9NPI6 582 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 ZNF112Q9UJU3 913 aa11.4□□□□□ -0.58
NPLOC4-219ENST00000576713 GSG1L2A8MUP6 293 aa11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 PPP1R12BO60237 982 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 TRAK2O60296 914 aa11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 USP5P45974 858 aa11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 IRF5Q13568 498 aa11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 TTC22Q5TAA0 569 aa11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 VPS53Q5VIR6 699 aa11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 ANKLE1Q8NAG6 615 aa11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 CCDC136Q96JN2 1154 aa11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
NPLOC4-219ENST00000576713 GPAA1O43292 621 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 NEFLP07196 543 aa11.38□□□□□ -0.59
NPLOC4-219ENST00000576713 SDSP20132 328 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms