RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 FAM204AQ9H8W3 233 aa19.28■□□□□ 0.68
PPP4R3A-208ENST00000555462 GNL3LQ9NVN8 582 aaKnown RBP19.28■□□□□ 0.68
PPP4R3A-208ENST00000555462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.28■□□□□ 0.681e-8■■■■□ 26.1
PPP4R3A-208ENST00000555462 EHD2Q9NZN4 543 aa19.28■□□□□ 0.68
PPP4R3A-208ENST00000555462 CYP2D6P10635 497 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 PTPROQ16827 1216 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 GIGYF2Q6Y7W6 1299 aaKnown RBP19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 SGMS1Q86VZ5 419 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 DZIP3Q86Y13 1208 aaKnown RBP19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 ENAHQ8N8S7 591 aaPredicted RBP19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 SLC4A9Q96Q91 983 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 MTRQ99707 1265 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 NAPGQ99747 312 aaPredicted RBP19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 PCDH11XQ9BZA7 1347 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 PCDH11YQ9BZA8 1340 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 ATP1A1P05023 1023 aaKnown RBP19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 SLC51AQ86UW1 340 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 FBXL16Q8N461 479 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 MMS19Q96T76 1030 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 RIC1Q4ADV7 1423 aa19.27■□□□□ 0.68
PPP4R3A-208ENST00000555462 CCDC151A5D8V7 595 aa19.27■□□□□ 0.67
PPP4R3A-208ENST00000555462 STARD3NLO95772 234 aa19.27■□□□□ 0.67
PPP4R3A-208ENST00000555462 PUM3Q15397 648 aaKnown RBP19.27■□□□□ 0.67
PPP4R3A-208ENST00000555462 WASF1Q92558 559 aa19.27■□□□□ 0.67
PPP4R3A-208ENST00000555462 RRP15Q9Y3B9 282 aaKnown RBP19.27■□□□□ 0.67
PPP4R3A-208ENST00000555462 TTC26A0AVF1 554 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 KRT2P35908 639 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 RNASE9P60153 205 aaKnown RBP19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 TTC38Q5R3I4 469 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 HDXQ7Z353 690 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 KRT26Q7Z3Y9 468 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 JADE2Q9NQC1 790 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 GOLGA6L9A6NEM1 432 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 CCDC122Q5T0U0 273 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 KRT23Q9C075 422 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 XDHP47989 1333 aa19.26■□□□□ 0.67
PPP4R3A-208ENST00000555462 KCNJ18B7U540 433 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 LIFRP42702 1097 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 SLC7A5Q01650 507 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 KCNJ12Q14500 433 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 VGLL2Q8N8G2 317 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 ABHD10Q9NUJ1 306 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 AGPAT5Q9NUQ2 364 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 C1orf167Q5SNV9 1468 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 SLC5A1P13866 664 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 IBSPP21815 317 aaPredicted RBP19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 PRCPP42785 496 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 PKN1Q16512 942 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 KIAA1328Q86T90 577 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 FOXP1Q9H334 677 aaPredicted RBP19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 ATG3Q9NT62 314 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 MYH8P13535 1937 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 USP17L12C9JPN9 530 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 USP17L21D6R901 530 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 MYBL2P10244 700 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 COPB1P53618 953 aaKnown RBP19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 EZH2Q15910 746 aaKnown RBP19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 FCHSD1Q86WN1 690 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 LPIN2Q92539 896 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 MYO6Q9UM54 1294 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 ARFGEF2Q9Y6D5 1785 aa19.25■□□□□ 0.67
PPP4R3A-208ENST00000555462 MAP3K15Q6ZN16 1313 aa19.24■□□□□ 0.67
PPP4R3A-208ENST00000555462 SUSD4Q5VX71 490 aa19.24■□□□□ 0.67
PPP4R3A-208ENST00000555462 TMEM94Q12767 1356 aa19.24■□□□□ 0.67
PPP4R3A-208ENST00000555462 B4DLN1 442 aa19.24■□□□□ 0.67
PPP4R3A-208ENST00000555462 EIF5P55010 431 aaKnown RBP19.24■□□□□ 0.67
PPP4R3A-208ENST00000555462 C2orf54Q08AI8 447 aa19.24■□□□□ 0.67
PPP4R3A-208ENST00000555462 IL17AQ16552 155 aa19.24■□□□□ 0.67
PPP4R3A-208ENST00000555462 L1RE1Q9UN81 338 aa19.24■□□□□ 0.67
PPP4R3A-208ENST00000555462 TULP1O00294 542 aaPredicted RBP19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 DHX37Q8IY37 1157 aaKnown RBP19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 LACRTQ9GZZ8 138 aa19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 RCCD1A6NED2 376 aa19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 PLEKP08567 350 aaPredicted RBP19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 ACTN2P35609 894 aa19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 CEP112Q8N8E3 955 aa19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 RASSF4Q9H2L5 321 aa19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 AATFQ9NY61 560 aaKnown RBP eCLIP19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 TFCP2L1Q9NZI6 479 aa19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 CEP131Q9UPN4 1083 aa19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 ARHGAP25P42331 645 aa19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 PANX2Q96RD6 677 aa19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 REXO2Q9Y3B8 237 aaKnown RBP19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 EPN1Q9Y6I3 576 aaPredicted RBP19.23■□□□□ 0.67
PPP4R3A-208ENST00000555462 TULP2O00295 520 aa19.22■□□□□ 0.67
PPP4R3A-208ENST00000555462 ERLIN1O75477 346 aa19.22■□□□□ 0.67
PPP4R3A-208ENST00000555462 GOLGA8HP0CJ92 632 aa19.22■□□□□ 0.67
PPP4R3A-208ENST00000555462 TRIM47Q96LD4 638 aa19.22■□□□□ 0.67
PPP4R3A-208ENST00000555462 TUBB4AP04350 444 aa19.22■□□□□ 0.67
PPP4R3A-208ENST00000555462 PAK1Q13153 545 aa19.22■□□□□ 0.67
PPP4R3A-208ENST00000555462 CATIPQ7Z7H3 387 aa19.22■□□□□ 0.67
PPP4R3A-208ENST00000555462 VAT1LQ9HCJ6 419 aa19.22■□□□□ 0.67
PPP4R3A-208ENST00000555462 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 RNF40O75150 1001 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 CNGA4Q8IV77 575 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 SRBD1Q8N5C6 995 aaKnown RBP19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 HDAC7Q8WUI4 952 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 UBXN6Q9BZV1 441 aa19.21■□□□□ 0.67
PPP4R3A-208ENST00000555462 CNNM2Q9H8M5 875 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms