RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 BAG6P46379 1132 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 PIP4K2BP78356 416 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 SLC7A5Q01650 507 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 EXOSC10Q01780 885 aaKnown RBP8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 PDE4BQ07343 736 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 GGT6Q6P531 493 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 DDX42Q86XP3 938 aaKnown RBP eCLIP8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 WNT8BQ93098 351 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 WDR89Q96FK6 387 aaPredicted RBP8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 EXOC2Q96KP1 924 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 CAAP1Q9H8G2 361 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 ADAM30Q9UKF2 790 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 VWDEQ8N2E2 1590 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 FAM86C2PA6NEL3 165 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 CHURC1-FNTBB4DL54 471 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 MAOBP27338 520 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 L1CAMP32004 1257 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 BRDTQ58F21 947 aaPredicted RBP8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 IL22RA1Q8N6P7 574 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 ELMO3Q96BJ8 720 aa8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 NCOA5Q9HCD5 579 aaKnown RBP8.29□□□□□ -1.08
TGFBR1-208ENST00000550253 DCDC2CA8MYV0 355 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 MAP4K4O95819 1239 aaPredicted RBP8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 ADH6P28332 368 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 HSPA1LP34931 641 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 KIF4BQ2VIQ3 1234 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 GNPTABQ3T906 1256 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 RNF180Q86T96 592 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 FCHSD1Q86WN1 690 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 VWA5B2Q8N398 1253 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 CEP89Q96ST8 783 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 KIF2CQ99661 725 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 OSGEPQ9NPF4 335 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 KLHL3Q9UH77 587 aa8.28□□□□□ -1.08
TGFBR1-208ENST00000550253 CCDC194A0A1B0GVG4 234 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 A0A1W2PQU0 124 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 PLD2O14939 933 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 PDE8AO60658 829 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 RGS9O75916 674 aaPredicted RBP8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 LIG1P18858 919 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 ARL4DP49703 201 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 RING1Q06587 406 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 FNDC3BQ53EP0 1204 aaKnown RBP8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 TXNDC11Q6PKC3 985 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 ACSF2Q96CM8 615 aaPredicted RBP8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 DHRS4Q9BTZ2 278 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 ARHGEF4Q9NR80 690 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 CFDP1Q9UEE9 299 aaPredicted RBP8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 PLEKHH2Q8IVE3 1493 aa8.27□□□□□ -1.09
TGFBR1-208ENST00000550253 CCNB3Q8WWL7 1395 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 SHANK2Q9UPX8 1470 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 CDC14CA4D256 554 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 GSG1L2A8MUP6 293 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 LINC01387J3KSC0 135 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 RGS20O76081 388 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 PGRP06401 933 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 GRK4P32298 578 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 ZC3H12AQ5D1E8 599 aaKnown RBP8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 C12orf40Q86WS4 652 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 NUDT8Q8WV74 236 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 KIFC2Q96AC6 838 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 CLUHP3Q96NS8 147 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 PCDHGC5Q9Y5F6 944 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 KDM5DQ9BY66 1539 aa8.26□□□□□ -1.09
TGFBR1-208ENST00000550253 ELOA3CA0A087WX78 387 aaPredicted RBP8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 PRAMEF27A3QJZ7 478 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 ELOA3DA6NLF2 546 aaPredicted RBP8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 TM4SF5O14894 197 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 PPFIA3O75145 1194 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 POLR2BP30876 1174 aaKnown RBP8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 SOX5P35711 763 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 ZNF143P52747 638 aaPredicted RBP8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 NFKB2Q00653 900 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 ELOA3BQ3SY89 546 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 FAM209AQ5JX71 171 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 UBR7Q8N806 425 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 ELOA3Q8NG57 546 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 NANOS1Q8WY41 292 aaKnown RBP8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 WNT10AQ9GZT5 417 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 SENP2Q9HC62 589 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 SUSD2Q9UGT4 822 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 MRPS23Q9Y3D9 190 aaKnown RBP8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 EID1Q9Y6B2 187 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 CPS1P31327 1500 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 IQGAP1P46940 1657 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 PZPP20742 1482 aa8.25□□□□□ -1.09
TGFBR1-208ENST00000550253 NRG2O14511 850 aaPredicted RBP8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 FSCN2O14926 492 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 RAG1P15918 1043 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 MX2P20592 715 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 PMLP29590 882 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 CCNFP41002 786 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 PDE3AQ14432 1141 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 AKAP4Q5JQC9 854 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 SV2AQ7L0J3 742 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 RAVER1Q8IY67 606 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 RUSC1Q9BVN2 902 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 MAPRE3Q9UPY8 281 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 STARD13Q9Y3M8 1113 aa8.24□□□□□ -1.09
TGFBR1-208ENST00000550253 RIPOR2Q9Y4F9 1068 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms