RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ADAMTS3O15072 1205 aa15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 RNF40O75150 1001 aa15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 SYF2O95926 243 aaKnown RBP15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 NOP2P46087 812 aaKnown RBP15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 RASGRF1Q13972 1273 aa15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 PACS2Q86VP3 889 aa15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 KCPQ6ZWJ8 1503 aa15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 ATP1A1P05023 1023 aaKnown RBP15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 WHAMMP3Q1A5X7 153 aa15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 ZCRB1Q8TBF4 217 aaKnown RBP15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 CTAGE1Q96RT6 745 aa15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 CEP131Q9UPN4 1083 aa15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 SLC4A4Q9Y6R1 1079 aa15.74■□□□□ 0.11
SCNN1A-215ENST00000540037 EIF3CLB5ME19 914 aaKnown RBP15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 PKN1Q16512 942 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 TMTC1Q8IUR5 882 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 DNAJC10Q8IXB1 793 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 EIF3CQ99613 913 aaKnown RBP15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 ANKRD18BA2A2Z9 1011 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 TRIM49BA6NDI0 452 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 PLEKHA8P1O95397 391 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 MYBL2P10244 700 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 COPB1P53618 953 aaKnown RBP15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 PIP4K2BP78356 416 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 SPATA5Q8NB90 893 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 FAM71BQ8TC56 605 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 GDAQ9Y2T3 454 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 SPATA31A3Q5VYP0 1347 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 LRP6O75581 1613 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 MINDY4BA8MYZ0 360 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 CTSWP56202 376 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 ALX1Q15699 326 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 CYP26C1Q6V0L0 522 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 SDR42E1Q8WUS8 393 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 GSDMAQ96QA5 445 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 RABEP2Q9H5N1 569 aa15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 V9GY48 417 aaPredicted RBP15.73■□□□□ 0.11
SCNN1A-215ENST00000540037 COL18A1P39060 1754 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 PES1O00541 588 aaKnown RBP15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 IVLP07476 585 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 FECHP22830 423 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 ARID4AP29374 1257 aaPredicted RBP15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 KRT23Q9C075 422 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 IQSEC3Q9UPP2 1182 aaPredicted RBP15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 ERICH2A1L162 156 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 ZNF185O15231 689 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 UBXN1Q04323 297 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 PTGDRQ13258 359 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 PLA2G12BQ9BX93 195 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 CNNM2Q9H8M5 875 aa15.72■□□□□ 0.11
SCNN1A-215ENST00000540037 TTC26A0AVF1 554 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 KCNJ18B7U540 433 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 NDUFA10O95299 355 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 MRPS25P82663 173 aaKnown RBP15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 KCNJ12Q14500 433 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 TCP11X2Q5H9J9 407 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 ASAP1Q9ULH1 1129 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 EPN1Q9Y6I3 576 aaPredicted RBP15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 CYP2D7A0A087X1C5 515 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 IRS4O14654 1257 aaPredicted RBP15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 SART3Q15020 963 aaKnown RBP15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 KIF6Q6ZMV9 814 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 TOM1L2Q6ZVM7 507 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 NLRP10Q86W26 655 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 NELFBQ8WX92 580 aa15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 LIMA1Q9UHB6 759 aaKnown RBP15.71■□□□□ 0.11
SCNN1A-215ENST00000540037 CHD4Q14839 1912 aa15.71■□□□□ 0.1
SCNN1A-215ENST00000540037 IL17AQ16552 155 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 TRAPPC11Q7Z392 1133 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 CCDC148Q8NFR7 591 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 STAG1Q8WVM7 1258 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 ZNF512BQ96KM6 892 aaPredicted RBP15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 DUSP10Q9Y6W6 482 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 TNKSO95271 1327 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 ITIH6Q6UXX5 1313 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 ALS2Q96Q42 1657 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 RCCD1A6NED2 376 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 PRPF6O94906 941 aaKnown RBP15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 KRT2P35908 639 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 PMS1P54277 932 aaKnown RBP15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 USP14P54578 494 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 HERVK_113P62684 666 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 WDR93Q6P2C0 686 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 ADGRA1Q86SQ6 560 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 CCDC51Q96ER9 411 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 UBAC1Q9BSL1 405 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 PHF20Q9BVI0 1012 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 HPCAL4Q9UM19 191 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 ZC3H4Q9UPT8 1303 aaKnown RBP15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 RPS6KA5O75582 802 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 EVX2Q03828 476 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 MAP3K12Q12852 859 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 TRIM28Q13263 835 aaKnown RBP15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 EHD4Q9H223 541 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 TRMT112Q9UI30 125 aaKnown RBP15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
SCNN1A-215ENST00000540037 LRRC10BA6NIK2 292 aa15.69■□□□□ 0.1
SCNN1A-215ENST00000540037 GGCXP38435 758 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms