RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 CAPN12Q6ZSI9 719 aa5.71□□□□□ -1.5
C11orf54-208ENST00000530279 FAM214BQ7L5A3 538 aa5.71□□□□□ -1.5
C11orf54-208ENST00000530279 CXXC1Q9P0U4 656 aaPredicted RBP5.71□□□□□ -1.5
C11orf54-208ENST00000530279 BIN2Q9UBW5 565 aaPredicted RBP5.71□□□□□ -1.5
C11orf54-208ENST00000530279 CLTCQ00610 1675 aaKnown RBP5.71□□□□□ -1.5
C11orf54-208ENST00000530279 NAIPQ13075 1403 aa5.71□□□□□ -1.5
C11orf54-208ENST00000530279 NUP155O75694 1391 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 ZNF142P52746 1687 aaPredicted RBP5.7□□□□□ -1.5
C11orf54-208ENST00000530279 OTOL1A6NHN0 477 aaPredicted RBP5.7□□□□□ -1.5
C11orf54-208ENST00000530279 A6NHS1 94 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 AKAP8O43823 692 aaKnown RBP5.7□□□□□ -1.5
C11orf54-208ENST00000530279 RAC2P15153 192 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 ID3Q02535 119 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 SF3B2Q13435 895 aaKnown RBP5.7□□□□□ -1.5
C11orf54-208ENST00000530279 TTLL4Q14679 1199 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 OCLNQ16625 522 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 C8orf34Q49A92 452 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 ZNF385BQ569K4 471 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 PEAR1Q5VY43 1037 aaPredicted RBP5.7□□□□□ -1.5
C11orf54-208ENST00000530279 PHLDB3Q6NSJ2 640 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 ATCAYQ86WG3 371 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 NPAS4Q8IUM7 802 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 MKNK1Q9BUB5 465 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 DISC1Q9NRI5 854 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 CNOT6Q9ULM6 557 aaKnown RBP5.7□□□□□ -1.5
C11orf54-208ENST00000530279 CEP170BQ9Y4F5 1589 aaPredicted RBP5.7□□□□□ -1.5
C11orf54-208ENST00000530279 MED14O60244 1454 aa5.7□□□□□ -1.5
C11orf54-208ENST00000530279 KDM5AP29375 1690 aaKnown RBP5.69□□□□□ -1.5
C11orf54-208ENST00000530279 EFCAB6Q5THR3 1501 aa5.69□□□□□ -1.5
C11orf54-208ENST00000530279 UNC13BO14795 1591 aa5.69□□□□□ -1.5
C11orf54-208ENST00000530279 LIG1P18858 919 aa5.69□□□□□ -1.5
C11orf54-208ENST00000530279 ITGAEP38570 1179 aa5.69□□□□□ -1.5
C11orf54-208ENST00000530279 DLG4P78352 724 aa5.69□□□□□ -1.5
C11orf54-208ENST00000530279 TMEM151BQ8IW70 566 aa5.69□□□□□ -1.5
C11orf54-208ENST00000530279 EDEM1Q92611 657 aa5.69□□□□□ -1.5
C11orf54-208ENST00000530279 LATS2Q9NRM7 1088 aa5.69□□□□□ -1.5
C11orf54-208ENST00000530279 MYRFQ9Y2G1 1151 aa5.69□□□□□ -1.5
C11orf54-208ENST00000530279 UGGT1Q9NYU2 1555 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 CAMSAP1Q5T5Y3 1602 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 MYO3AQ8NEV4 1616 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 PHACTR2O75167 634 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 HCLS1P14317 486 aaPredicted RBP5.68□□□□□ -1.5
C11orf54-208ENST00000530279 IDI1Q13907 227 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 GLYCTKQ8IVS8 523 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 ZSCAN29Q8IWY8 852 aaPredicted RBP5.68□□□□□ -1.5
C11orf54-208ENST00000530279 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.68□□□□□ -1.5
C11orf54-208ENST00000530279 EID1Q9Y6B2 187 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 IQSEC2Q5JU85 1478 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 ARHGAP23Q9P227 1491 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 TET3O43151 1660 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 SLIT1O75093 1534 aa5.68□□□□□ -1.5
C11orf54-208ENST00000530279 TMEM2Q9UHN6 1383 aa5.67□□□□□ -1.5
C11orf54-208ENST00000530279 IQGAP3Q86VI3 1631 aa5.67□□□□□ -1.5
C11orf54-208ENST00000530279 GNAT3A8MTJ3 354 aa5.67□□□□□ -1.5
C11orf54-208ENST00000530279 ABL1P00519 1130 aa5.67□□□□□ -1.5
C11orf54-208ENST00000530279 FGD1P98174 961 aa5.67□□□□□ -1.5
C11orf54-208ENST00000530279 DNM1Q05193 864 aaKnown RBP5.67□□□□□ -1.5
C11orf54-208ENST00000530279 EFEMP1Q12805 493 aa5.67□□□□□ -1.5
C11orf54-208ENST00000530279 WDR89Q96FK6 387 aaPredicted RBP5.67□□□□□ -1.5
C11orf54-208ENST00000530279 SSU72Q9NP77 194 aaKnown RBP5.67□□□□□ -1.5
C11orf54-208ENST00000530279 B3GALT4O96024 378 aa5.66□□□□□ -1.5
C11orf54-208ENST00000530279 FKBP4Q02790 459 aaKnown RBP eCLIP5.66□□□□□ -1.5
C11orf54-208ENST00000530279 SPRED3Q2MJR0 410 aa5.66□□□□□ -1.5
C11orf54-208ENST00000530279 ZNF326Q5BKZ1 582 aaKnown RBP5.66□□□□□ -1.5
C11orf54-208ENST00000530279 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.66□□□□□ -1.5
C11orf54-208ENST00000530279 MCOLN1Q9GZU1 580 aa5.66□□□□□ -1.5
C11orf54-208ENST00000530279 ATP13A1Q9HD20 1204 aa5.66□□□□□ -1.5
C11orf54-208ENST00000530279 SEMA3GQ9NS98 782 aa5.66□□□□□ -1.5
C11orf54-208ENST00000530279 KCTD3Q9Y597 815 aa5.66□□□□□ -1.5
C11orf54-208ENST00000530279 SETD5Q9C0A6 1442 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 SCAF11Q99590 1463 aaKnown RBP5.65□□□□□ -1.5
C11orf54-208ENST00000530279 STRCQ7RTU9 1775 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 RBM47A0AV96 593 aaKnown RBP5.65□□□□□ -1.5
C11orf54-208ENST00000530279 RFXAPO00287 272 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 ICMTO60725 284 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 FAM13AO94988 1023 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 SERPINB4P48594 390 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 AP3B2Q13367 1082 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 TTC6Q86TZ1 520 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 FBXO41Q8TF61 875 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 MYLIPQ8WY64 445 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 ALPK1Q96QP1 1244 aa5.65□□□□□ -1.5
C11orf54-208ENST00000530279 RPGRIP1LQ68CZ1 1315 aa5.65□□□□□ -1.51
C11orf54-208ENST00000530279 GCC2Q8IWJ2 1684 aa5.65□□□□□ -1.51
C11orf54-208ENST00000530279 NPHP4O75161 1426 aaPredicted RBP5.65□□□□□ -1.51
C11orf54-208ENST00000530279 H3BRB1 525 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 SEMA7AO75326 666 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 TNFRSF21O75509 655 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 PDGFAP04085 211 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 GRIA4P48058 902 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 ALKBH2Q6NS38 261 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 CCNJLQ8IV13 435 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 GPR20Q99678 358 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 TUT1Q9H6E5 874 aaKnown RBP5.64□□□□□ -1.51
C11orf54-208ENST00000530279 CCDC86Q9H6F5 360 aaKnown RBP5.64□□□□□ -1.51
C11orf54-208ENST00000530279 TBX22Q9Y458 520 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 CEP152O94986 1710 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 PIK3R4Q99570 1358 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 ADGRB3O60242 1522 aa5.64□□□□□ -1.51
C11orf54-208ENST00000530279 SYNMO15061 1565 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms