RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 NTF4P34130 210 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 CDKN1CP49918 316 aaPredicted RBP8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 EVA1CP58658 441 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 EXOSC10Q01780 885 aaKnown RBP8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 CNNM4Q6P4Q7 775 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 NSMFQ6X4W1 530 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 DYMQ7RTS9 669 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 ZNF227Q86WZ6 799 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 CRACR2BQ8N4Y2 399 aaPredicted RBP8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 CCDC136Q96JN2 1154 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 IER2Q9BTL4 223 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 KLHL25Q9H0H3 589 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 RNF208Q9H0X6 261 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 MAGEC2Q9UBF1 373 aaPredicted RBP8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 SUSD2Q9UGT4 822 aa8.51□□□□□ -1.05
AP001960.1-201ENST00000506494 PRODHO43272 600 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 OIP5O43482 229 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 KCNQ2O43526 872 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 VSIG8P0DPA2 414 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 FGFR1P11362 822 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 ADH5P11766 374 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 CAP2P40123 477 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 RAC1P63000 192 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 DCAF15Q66K64 600 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 DDX42Q86XP3 938 aaKnown RBP eCLIP8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 UBR7Q8N806 425 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 BVESQ8NE79 360 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 ATL2Q8NHH9 583 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 XAGE3Q8WTP9 111 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 ZNF512BQ96KM6 892 aaPredicted RBP8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 INTS7Q9NVH2 962 aaKnown RBP8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 WHRNQ9P202 907 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 APEX2Q9UBZ4 518 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 SFMBT1Q9UHJ3 866 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 TCEAL9Q9UHQ7 104 aa8.5□□□□□ -1.05
AP001960.1-201ENST00000506494 DNAJC25-GNG10A0A024R161 153 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 MEGF11A6BM72 1044 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 CBFA2T2O43439 604 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 PABPC1P11940 636 aaKnown RBP8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 PMLP29590 882 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 RNF4P78317 190 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 MAP7Q14244 749 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 SLBPQ14493 270 aaKnown RBP eCLIP8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 POMZP3Q6PJE2 187 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 ACAD11Q709F0 780 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 LRRTM3Q86VH5 581 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 ISL2Q96A47 359 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 FOXQ1Q9C009 403 aa8.49□□□□□ -1.05
AP001960.1-201ENST00000506494 GSG1L2A8MUP6 293 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 NEFMP07197 916 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 ITGA4P13612 1032 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 ASPAP45381 313 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 SOX4Q06945 474 aaPredicted RBP8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 FAM50AQ14320 339 aaKnown RBP8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 RNF180Q86T96 592 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 FBXO11Q86XK2 927 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 FMNL3Q8IVF7 1028 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 MFSD2AQ8NA29 543 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 C12orf50Q8NA57 414 aaPredicted RBP8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 SMG8Q8ND04 991 aaKnown RBP8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 SLC16A10Q8TF71 515 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 CLUHP3Q96NS8 147 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 TARS2Q9BW92 718 aaKnown RBP8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 FAM126AQ9BYI3 521 aaPredicted RBP8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 SUGCTQ9HAC7 445 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 AKT3Q9Y243 479 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 FAN1Q9Y2M0 1017 aa8.48□□□□□ -1.05
AP001960.1-201ENST00000506494 BCRP11274 1271 aa8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 BRDTQ58F21 947 aaPredicted RBP8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 FDX2Q6P4F2 183 aa8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 DDX46Q7L014 1031 aaKnown RBP8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 C7orf61Q8IZ16 206 aa8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 AHI1Q8N157 1196 aa8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 PPM1KQ8N3J5 372 aa8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 LRRC4BQ9NT99 713 aa8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 ZNF451Q9Y4E5 1061 aa8.47□□□□□ -1.05
AP001960.1-201ENST00000506494 SHISA8B8ZZ34 492 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 DLL1O00548 723 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 LRIG2O94898 1065 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 APPP05067 770 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 CD247P20963 164 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 NOL9Q5SY16 702 aaKnown RBP8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 NBPF12Q5TAG4 269 aaPredicted RBP8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 ILDR2Q71H61 639 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 ARMCX6Q7L4S7 300 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 UBE3DQ7Z6J8 389 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 FMR1NBQ8N0W7 255 aaPredicted RBP8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 NDOR1Q9UHB4 597 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 PCOLCE2Q9UKZ9 415 aa8.46□□□□□ -1.06
AP001960.1-201ENST00000506494 WISP1O95388 367 aa8.45□□□□□ -1.06
AP001960.1-201ENST00000506494 DRD2P14416 443 aa8.45□□□□□ -1.06
AP001960.1-201ENST00000506494 SDSP20132 328 aa8.45□□□□□ -1.06
AP001960.1-201ENST00000506494 POU3F3P20264 500 aaPredicted RBP8.45□□□□□ -1.06
AP001960.1-201ENST00000506494 GRIA2P42262 883 aa8.45□□□□□ -1.06
AP001960.1-201ENST00000506494 AUHQ13825 339 aaKnown RBP8.45□□□□□ -1.06
AP001960.1-201ENST00000506494 COL9A3Q14050 684 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms