RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 NFIXQ14938 502 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 TRIP4Q15650 581 aaPredicted RBP5.13□□□□□ -1.59
LRCH3-213ENST00000471667 SLC9C1Q4G0N8 1177 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 MAP4K3Q8IVH8 894 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.13□□□□□ -1.59
LRCH3-213ENST00000471667 DCAF11Q8TEB1 546 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 BCL2L13Q9BXK5 485 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 SAP130Q9H0E3 1048 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 TMX4Q9H1E5 349 aaPredicted RBP5.13□□□□□ -1.59
LRCH3-213ENST00000471667 TRIM33Q9UPN9 1127 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 PTPN22Q9Y2R2 807 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 KIF7Q2M1P5 1343 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 EVC2Q86UK5 1308 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 IRS2Q9Y4H2 1338 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 AKAP11Q9UKA4 1901 aa5.13□□□□□ -1.59
LRCH3-213ENST00000471667 CRKLP46109 303 aaKnown RBP5.12□□□□□ -1.59
LRCH3-213ENST00000471667 OCLNQ16625 522 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 SWI5Q1ZZU3 235 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 LRIT3Q3SXY7 679 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 C16orf46Q6P387 395 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 Q6ZS46 218 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 OTOP1Q7RTM1 612 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 NPM2Q86SE8 214 aaKnown RBP5.12□□□□□ -1.59
LRCH3-213ENST00000471667 SLC51AQ86UW1 340 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 NIM1KQ8IY84 436 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 AGGF1Q8N302 714 aaeCLIP5.12□□□□□ -1.59
LRCH3-213ENST00000471667 PRO3102Q9H379 93 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 ATG3Q9NT62 314 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 GPRC5DQ9NZD1 345 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 CDHR2Q9BYE9 1310 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 CENPJQ9HC77 1338 aaPredicted RBP5.12□□□□□ -1.59
LRCH3-213ENST00000471667 COL6A3P12111 3177 aa5.12□□□□□ -1.59
LRCH3-213ENST00000471667 DLEC1Q9Y238 1755 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 H7C1D1 291 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 GLB1P16278 677 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 BRD2P25440 801 aaKnown RBP5.11□□□□□ -1.59
LRCH3-213ENST00000471667 KRT26Q7Z3Y9 468 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 USP48Q86UV5 1035 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 KRTAP1-3Q8IUG1 177 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 CACTIN-AS1Q8N1I8 211 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 MAFAQ8NHW3 353 aaPredicted RBP5.11□□□□□ -1.59
LRCH3-213ENST00000471667 DCPSQ96C86 337 aaKnown RBP5.11□□□□□ -1.59
LRCH3-213ENST00000471667 KRTAP4-12Q9BQ66 201 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 MUC3BQ9H195 1237 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 PCMTD2Q9NV79 361 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 NARFQ9UHQ1 456 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 ZMIZ1Q9ULJ6 1067 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 PPME1Q9Y570 386 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 FER1L6Q2WGJ9 1857 aa5.11□□□□□ -1.59
LRCH3-213ENST00000471667 CEP290O15078 2479 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 CYP27B1O15528 508 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 HOXC9P31274 260 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 KDRP35968 1356 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 FKBP1BP68106 108 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 TCIRG1Q13488 830 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 FAM26DQ5JW98 314 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 HDGFL2Q7Z4V5 671 aaPredicted RBP5.1□□□□□ -1.59
LRCH3-213ENST00000471667 RBBP6Q7Z6E9 1792 aaKnown RBP5.1□□□□□ -1.59
LRCH3-213ENST00000471667 RASAL3Q86YV0 1011 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 IFNL2Q8IZJ0 200 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 USHBP1Q8N6Y0 703 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 CNBD1Q8NA66 436 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 OR13H1Q8NG92 308 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 PIK3R5Q8WYR1 880 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 ZNF333Q96JL9 665 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 PSMD1Q99460 953 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 PAPPA2Q9BXP8 1791 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 PGAP2Q9UHJ9 254 aa5.1□□□□□ -1.59
LRCH3-213ENST00000471667 LTN1O94822 1766 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 CARMIL3Q8ND23 1372 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 RAB3GAP2Q9H2M9 1393 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 A0A087WZG4 1122 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 LINC01387J3KSC0 135 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 TNFRSF10BO14763 440 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 HSP90AB1P08238 724 aaKnown RBP5.09□□□□□ -1.59
LRCH3-213ENST00000471667 SRGNP10124 158 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 NPR1P16066 1061 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 ALDH1B1P30837 517 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 SSTR4P31391 388 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 BMP8BP34820 402 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 TM4SF4P48230 202 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 HYAL2Q12891 473 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 ELOAQ14241 798 aaKnown RBP5.09□□□□□ -1.59
LRCH3-213ENST00000471667 NBPF6Q5VWK0 638 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 OTUD7BQ6GQQ9 843 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 FAM109BQ6ICB4 259 aaPredicted RBP5.09□□□□□ -1.59
LRCH3-213ENST00000471667 CAPN12Q6ZSI9 719 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.09□□□□□ -1.59
LRCH3-213ENST00000471667 NME9Q86XW9 330 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 TDHQ8IZJ6 230 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 GALNT11Q8NCW6 608 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 STK32AQ8WU08 396 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 COL26A1Q96A83 441 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 NBPF4Q96M43 638 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 MKNK1Q9BUB5 465 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 LACRTQ9GZZ8 138 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 FAM13BQ9NYF5 915 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 STAP2Q9UGK3 403 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 RAXQ9Y2V3 346 aa5.09□□□□□ -1.59
LRCH3-213ENST00000471667 RTL1A6NKG5 1358 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms