RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 VCAM1P19320 739 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 DNAJB2P25686 324 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 COPB2P35606 906 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 ATN1P54259 1190 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-205ENST00000470585 TFCP2Q12800 502 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 COG2Q14746 738 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 LRRC41Q15345 812 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 TRIM60Q495X7 471 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 ANKRD33Q7Z3H0 272 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 RNF180Q86T96 592 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 DPP9Q86TI2 863 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 TTC6Q86TZ1 520 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 MSL3Q8N5Y2 521 aaKnown RBP8.33□□□□□ -1.08
SF3A3-205ENST00000470585 CABP5Q9NP86 173 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 METRNQ9UJH8 293 aa8.33□□□□□ -1.08
SF3A3-205ENST00000470585 SYNGAP1Q96PV0 1343 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 A0A0G2JMZ2 1700 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 TRIM43BA6NCK2 446 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 SRGAP3O43295 1099 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 SLC25A27O95847 323 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 GH2P01242 217 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 ADORA2AP29274 412 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 CYP2C19P33261 490 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 MCAMP43121 646 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 MRPS5P82675 430 aaKnown RBP8.32□□□□□ -1.08
SF3A3-205ENST00000470585 FPGSQ05932 587 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 CCDC158Q5M9N0 1113 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 GJC2Q5T442 439 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-205ENST00000470585 TRPV1Q8NER1 839 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 NPLOC4Q8TAT6 608 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 TGFBRAP1Q8WUH2 860 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 NUP133Q8WUM0 1156 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 TRIM43Q96BQ3 446 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-205ENST00000470585 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 ASB2Q96Q27 587 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 GAS2L1Q99501 681 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-205ENST00000470585 C1QTNF1Q9BXJ1 281 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 SEZ6LQ9BYH1 1024 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 SPATC1LQ9H0A9 340 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 ZNF576Q9H609 170 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 PRDM5Q9NQX1 630 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-205ENST00000470585 SMC4Q9NTJ3 1288 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 AATFQ9NY61 560 aaKnown RBP eCLIP8.32□□□□□ -1.08
SF3A3-205ENST00000470585 THEGQ9P2T0 379 aa8.32□□□□□ -1.08
SF3A3-205ENST00000470585 PA2G4Q9UQ80 394 aaKnown RBP8.32□□□□□ -1.08
SF3A3-205ENST00000470585 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-205ENST00000470585 MYH1P12882 1939 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 DCDC2CA8MYV0 355 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 ANP32CO43423 234 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 GDF11O95390 407 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 RARBP10826 455 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 RAG1P15918 1043 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 JAG1P78504 1218 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 TLE2Q04725 743 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 PPIGQ13427 754 aaKnown RBP eCLIP8.31□□□□□ -1.084e-11■■□□□ 11.4
SF3A3-205ENST00000470585 ABCB5Q2M3G0 1257 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 CERKLQ49MI3 558 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-205ENST00000470585 WDR78Q5VTH9 848 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 MAPKAPK5Q8IW41 473 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 TIFAQ96CG3 184 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 FAM122AQ96E09 287 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 NEUROD6Q96NK8 337 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 SH2D4AQ9H788 454 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 BTBD7Q9P203 1132 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
SF3A3-205ENST00000470585 SMCHD1A6NHR9 2005 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 ELP1O95163 1332 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 ATMINO43313 823 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-205ENST00000470585 FCER1AP12319 257 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 CST5P28325 142 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-205ENST00000470585 ADCYAP1R1P41586 468 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 SLFN5Q08AF3 891 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 G3BP1Q13283 466 aaKnown RBP eCLIP8.3□□□□□ -1.08
SF3A3-205ENST00000470585 RAB30Q15771 203 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 AAK1Q2M2I8 961 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 RASIP1Q5U651 963 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 ASTLQ6HA08 431 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-205ENST00000470585 PI16Q6UXB8 463 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 TBC1D9Q6ZT07 1266 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 MAML3Q96JK9 1138 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 MOV10L1Q9BXT6 1211 aaKnown RBP8.3□□□□□ -1.08
SF3A3-205ENST00000470585 TANGO6Q9C0B7 1094 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 TSPYL2Q9H2G4 693 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-205ENST00000470585 MTIF3Q9H2K0 278 aaKnown RBP8.3□□□□□ -1.08
SF3A3-205ENST00000470585 RPAP3Q9H6T3 665 aaPredicted RBP8.3□□□□□ -1.08
SF3A3-205ENST00000470585 XPNPEP3Q9NQH7 507 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 MUC6Q6W4X9 2439 aa8.3□□□□□ -1.08
SF3A3-205ENST00000470585 CHD9Q3L8U1 2897 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 PEX10O60683 326 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 TIMP1P01033 207 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 C7P10643 843 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 AKR1A1P14550 325 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 ERCC3P19447 782 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 GABPAQ06546 454 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 GRIN2CQ14957 1233 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 RAB3GAP1Q15042 981 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 TTC39AQ5SRH9 613 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 MFSD5Q6N075 450 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 PSRC1Q6PGN9 363 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms