RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 SREBF2Q12772 1141 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 CCL15Q16663 113 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 CTR9Q6PD62 1173 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 CWC27Q6UX04 472 aaKnown RBP10□□□□□ -0.81
BRCC3-205ENST00000399026 TTC6Q86TZ1 520 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 METTL16Q86W50 562 aaKnown RBP10□□□□□ -0.81
BRCC3-205ENST00000399026 AMOTL1Q8IY63 956 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 BRI3BPQ8WY22 251 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 BEGAINQ9BUH8 593 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 IL25Q9H293 177 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 ARPP21Q9UBL0 812 aaPredicted RBP10□□□□□ -0.81
BRCC3-205ENST00000399026 ZBTB21Q9ULJ3 1066 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 CCDC171Q6TFL3 1326 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 ZSWIM8A7E2V4 1837 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 ROBO3Q96MS0 1386 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 MANSC4A6NHS7 340 aaPredicted RBP9.99□□□□□ -0.81
BRCC3-205ENST00000399026 TRPA1O75762 1119 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 GH2P01242 217 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 HSPA8P11142 646 aaKnown RBP9.99□□□□□ -0.81
BRCC3-205ENST00000399026 GNAT2P19087 354 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 CAP2P40123 477 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 PPATQ06203 517 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 GABPAQ06546 454 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 DGKZQ13574 1117 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 IFFO2Q5TF58 517 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 C12orf60Q5U649 245 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 CLEC10AQ8IUN9 316 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 TATDN2Q93075 761 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 HELLSQ9NRZ9 838 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 RNF186Q9NXI6 227 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.99□□□□□ -0.81
BRCC3-205ENST00000399026 PPP4R2Q9NY27 417 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 ZHX2Q9Y6X8 837 aa9.99□□□□□ -0.81
BRCC3-205ENST00000399026 MINDY4BA8MYZ0 360 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 MPHOSPH10O00566 681 aaKnown RBP9.98□□□□□ -0.81
BRCC3-205ENST00000399026 GTF2A2P52657 109 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 SNAPC2Q13487 334 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 MCMDC2Q4G0Z9 681 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 TATDN1Q6P1N9 297 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 FOXP4Q8IVH2 680 aaPredicted RBP9.98□□□□□ -0.81
BRCC3-205ENST00000399026 IFNL3Q8IZI9 196 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 FAM43AQ8N2R8 423 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 PTPN18Q99952 460 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 NAPBQ9H115 298 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 KCNH4Q9UQ05 1017 aa9.98□□□□□ -0.81
BRCC3-205ENST00000399026 PATL2C9JE40 543 aaKnown RBP9.97□□□□□ -0.81
BRCC3-205ENST00000399026 PRDM1O75626 825 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 ASNSP08243 561 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 AKR1B1P15121 316 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 CDK8P49336 464 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 LBX1P52954 281 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 MTMR2Q13614 643 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 RAB3GAP1Q15042 981 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 ABCB5Q2M3G0 1257 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 CERKLQ49MI3 558 aaPredicted RBP9.97□□□□□ -0.81
BRCC3-205ENST00000399026 GIMAP6Q6P9H5 292 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 GADL1Q6ZQY3 521 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 C16orf86Q6ZW13 317 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 TTC13Q8NBP0 860 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 NACAP1Q9BZK3 213 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 R3HDMLQ9H3Y0 253 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 TSR3Q9UJK0 312 aaKnown RBP9.97□□□□□ -0.81
BRCC3-205ENST00000399026 AFG3L2Q9Y4W6 797 aa9.97□□□□□ -0.81
BRCC3-205ENST00000399026 MYH4Q9Y623 1939 aa9.96□□□□□ -0.81
BRCC3-205ENST00000399026 A0A0G2JLL6 359 aaPredicted RBP9.96□□□□□ -0.82
BRCC3-205ENST00000399026 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 BTBD19C9JJ37 291 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 HIP1O00291 1037 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 TBC1D8O95759 1140 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 HSPD1P10809 573 aaKnown RBP9.96□□□□□ -0.82
BRCC3-205ENST00000399026 CETPP11597 493 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 GUCY1A2P33402 732 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 TM4SF4P48230 202 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 CTCFP49711 727 aaPredicted RBP9.96□□□□□ -0.82
BRCC3-205ENST00000399026 HMGCS2P54868 508 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 CTDSPL2Q05D32 466 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 PPARAQ07869 468 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 CRHR2Q13324 411 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 MOGSQ13724 837 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 SEPT2Q15019 361 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 ZYXQ15942 572 aaKnown RBP9.96□□□□□ -0.82
BRCC3-205ENST00000399026 SBK1Q52WX2 424 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 PRRT2Q7Z6L0 340 aaPredicted RBP9.96□□□□□ -0.82
BRCC3-205ENST00000399026 SAGE1Q9NXZ1 904 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
BRCC3-205ENST00000399026 SWAP70Q9UH65 585 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 PNMA3Q9UL41 463 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 HPS5Q9UPZ3 1129 aa9.96□□□□□ -0.82
BRCC3-205ENST00000399026 CASP8AP2Q9UKL3 1982 aa9.95□□□□□ -0.82
BRCC3-205ENST00000399026 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
BRCC3-205ENST00000399026 CA12O43570 354 aa9.95□□□□□ -0.82
BRCC3-205ENST00000399026 RASA1P20936 1047 aa9.95□□□□□ -0.82
BRCC3-205ENST00000399026 CHMLP26374 656 aa9.95□□□□□ -0.82
BRCC3-205ENST00000399026 HAND2P61296 217 aa9.95□□□□□ -0.82
BRCC3-205ENST00000399026 SPP2Q13103 211 aa9.95□□□□□ -0.82
BRCC3-205ENST00000399026 TAF1CQ15572 869 aaPredicted RBP9.95□□□□□ -0.82
BRCC3-205ENST00000399026 TREML2Q5T2D2 321 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms