RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 ERLIN1O75477 346 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 STX17P56962 302 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 MAGEB6Q8N7X4 407 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 TRERF1Q96PN7 1200 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 ZKSCAN3Q9BRR0 538 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 NACAP1Q9BZK3 213 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 SEC31BQ9NQW1 1179 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 ADAM21Q9UKJ8 722 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 NHSQ6T4R5 1651 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 TRIM75PA6NK02 468 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 AFMP43652 599 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 RASGRP2Q7LDG7 609 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 CNGA4Q8IV77 575 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 ARMT1Q9H993 441 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 AATFQ9NY61 560 aaKnown RBP eCLIP17.5■□□□□ 0.39
LRCH1-202ENST00000389797 PSD3Q9NYI0 1048 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.5■□□□□ 0.39
LRCH1-202ENST00000389797 CTAGE9A4FU28 777 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 MFAP3LO75121 409 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 TDO2P48775 406 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 ZSCAN26Q16670 478 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 OXER1Q8TDS5 423 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 NUP133Q8WUM0 1156 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 CCDC51Q96ER9 411 aa17.5■□□□□ 0.39
LRCH1-202ENST00000389797 MYO5AQ9Y4I1 1855 aaKnown RBP17.5■□□□□ 0.39
LRCH1-202ENST00000389797 SEMA3EO15041 775 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 MYCNP04198 464 aaPredicted RBP17.49■□□□□ 0.39
LRCH1-202ENST00000389797 KCNQ4P56696 695 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 RAD51AP2Q09MP3 1159 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 HDXQ7Z353 690 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 CMTR1Q8N1G2 835 aaKnown RBP17.49■□□□□ 0.39
LRCH1-202ENST00000389797 LPIN2Q92539 896 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 TTF2Q9UNY4 1162 aaKnown RBP17.49■□□□□ 0.39
LRCH1-202ENST00000389797 GSG1L2A8MUP6 293 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 XBP1P17861 261 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 PBX1P40424 430 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 AKAP17AQ02040 695 aaKnown RBP17.49■□□□□ 0.39
LRCH1-202ENST00000389797 SPATA5Q8NB90 893 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 FANCBQ8NB91 859 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 MTA3Q9BTC8 594 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 CWC15Q9P013 229 aaKnown RBP17.49■□□□□ 0.39
LRCH1-202ENST00000389797 TACC3Q9Y6A5 838 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 SPATA31A6Q5VVP1 1343 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 CLGNO14967 610 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 NTSR2O95665 410 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 CAPN2P17655 700 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 RCAN1P53805 252 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 CUL4BQ13620 913 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 PUM3Q15397 648 aaKnown RBP17.49■□□□□ 0.39
LRCH1-202ENST00000389797 STAG1Q8WVM7 1258 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 GSDMAQ96QA5 445 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 ANKZF1Q9H8Y5 726 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 RAB21Q9UL25 225 aa17.49■□□□□ 0.39
LRCH1-202ENST00000389797 SCN7AQ01118 1682 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 LMAN1P49257 510 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 MCM6Q14566 821 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 BEND6Q5SZJ8 279 aaPredicted RBP17.48■□□□□ 0.39
LRCH1-202ENST00000389797 CDKAL1Q5VV42 579 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 MSANTD4Q8NCY6 345 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 H3BQF6 201 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 EIF3JO75822 258 aaKnown RBP17.48■□□□□ 0.39
LRCH1-202ENST00000389797 GNAT2P19087 354 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 CASP14P31944 242 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 USP5P45974 858 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 ZNF654Q8IZM8 581 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 USP21Q9UK80 565 aa17.48■□□□□ 0.39
LRCH1-202ENST00000389797 CD44P16070 742 aaKnown RBP17.47■□□□□ 0.39
LRCH1-202ENST00000389797 GYS2P54840 703 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 SLC20A2Q08357 652 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 PAGE5Q96GU1 130 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 EPSTI1Q96J88 318 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 RNF41Q9H4P4 317 aaPredicted RBP17.47■□□□□ 0.39
LRCH1-202ENST00000389797 SBF2Q86WG5 1849 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 UBAC1Q9BSL1 405 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 SH3RF1Q7Z6J0 888 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 HELBQ8NG08 1087 aaPredicted RBP17.47■□□□□ 0.39
LRCH1-202ENST00000389797 GOLGA5Q8TBA6 731 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 RNF26Q9BY78 433 aaPredicted RBP17.47■□□□□ 0.39
LRCH1-202ENST00000389797 PDE11AQ9HCR9 933 aa17.47■□□□□ 0.39
LRCH1-202ENST00000389797 A0A0U1RQJ8 604 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 BMP15O95972 392 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 SLC35F6Q8N357 371 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 ATRIPQ8WXE1 791 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 SLC4A4Q9Y6R1 1079 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 A0A087X0B3 334 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 PRKAB2O43741 272 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 SLC5A1P13866 664 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 PARP10Q53GL7 1025 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 MSL3Q8N5Y2 521 aaKnown RBP17.46■□□□□ 0.39
LRCH1-202ENST00000389797 FERMT2Q96AC1 680 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 NAPGQ99747 312 aaPredicted RBP17.46■□□□□ 0.39
LRCH1-202ENST00000389797 GBP3Q9H0R5 595 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 ITIH6Q6UXX5 1313 aa17.46■□□□□ 0.39
LRCH1-202ENST00000389797 GYPCP04921 128 aa17.46■□□□□ 0.38
LRCH1-202ENST00000389797 TUBBP07437 444 aa17.46■□□□□ 0.38
LRCH1-202ENST00000389797 PPP2R5BQ15173 497 aa17.46■□□□□ 0.38
LRCH1-202ENST00000389797 SYMPKQ92797 1274 aaKnown RBP17.46■□□□□ 0.38
LRCH1-202ENST00000389797 PNKPQ96T60 521 aa17.46■□□□□ 0.38
LRCH1-202ENST00000389797 NIP7Q9Y221 180 aaKnown RBP eCLIP17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms