RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 CHMP4BP1P59074 171 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 PAK1Q13153 545 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 HLTFQ14527 1009 aaKnown RBP eCLIP18.85■□□□□ 0.61
PTK7-202ENST00000230419 CCDC122Q5T0U0 273 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 NELFBQ8WX92 580 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 KLRF2D3W0D1 207 aa18.84■□□□□ 0.61
PTK7-202ENST00000230419 TSPYL1Q9H0U9 437 aa18.84■□□□□ 0.61
PTK7-202ENST00000230419 TECP42680 631 aa18.84■□□□□ 0.61
PTK7-202ENST00000230419 SSR1P43307 286 aaKnown RBP18.84■□□□□ 0.61
PTK7-202ENST00000230419 ERO1AQ96HE7 468 aa18.84■□□□□ 0.61
PTK7-202ENST00000230419 PYM1Q9BRP8 204 aaKnown RBP18.84■□□□□ 0.61
PTK7-202ENST00000230419 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTK7-202ENST00000230419 SP4Q02446 784 aa18.84■□□□□ 0.61
PTK7-202ENST00000230419 LY9Q9HBG7 655 aa18.84■□□□□ 0.61
PTK7-202ENST00000230419 EPB41L4AQ9HCS5 686 aaPredicted RBP18.84■□□□□ 0.61
PTK7-202ENST00000230419 USP32Q8NFA0 1604 aa18.84■□□□□ 0.61
PTK7-202ENST00000230419 ERVV-1B6SEH8 477 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 H0YHG0 523 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 CHMP2AO43633 222 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 GRIN1Q05586 938 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 PPP2R3AQ06190 1150 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 UBE4AQ14139 1066 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 SLC4A9Q96Q91 983 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 SRRTQ9BXP5 876 aaKnown RBP18.83■□□□□ 0.61
PTK7-202ENST00000230419 UTYO14607 1347 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 TMEM232C9JQI7 657 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 TRAF5O00463 557 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 SCG2P13521 617 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 PTPROQ16827 1216 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 MAEAQ7L5Y9 396 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 PTF1AQ7RTS3 328 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 NELFCDQ8IXH7 590 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 NOC4LQ9BVI4 516 aaKnown RBP18.83■□□□□ 0.61
PTK7-202ENST00000230419 DBNDD1Q9H9R9 158 aa18.83■□□□□ 0.61
PTK7-202ENST00000230419 IFT172Q9UG01 1749 aa18.83■□□□□ 0.6
PTK7-202ENST00000230419 CYLC1P35663 651 aaPredicted RBP18.83■□□□□ 0.6
PTK7-202ENST00000230419 CLEC10AQ8IUN9 316 aa18.83■□□□□ 0.6
PTK7-202ENST00000230419 SMCO2A6NFE2 343 aa18.83■□□□□ 0.6
PTK7-202ENST00000230419 CPDO75976 1380 aa18.83■□□□□ 0.6
PTK7-202ENST00000230419 FGFR1OPO95684 399 aaKnown RBP18.82■□□□□ 0.6
PTK7-202ENST00000230419 IFNAR1P17181 557 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 SMARCC2Q8TAQ2 1214 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 ARHGAP6O43182 974 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 CASP7P55210 303 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 DPP8Q6V1X1 898 aaPredicted RBP18.82■□□□□ 0.6
PTK7-202ENST00000230419 FAM114A1Q8IWE2 563 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 BLIDQ8IZY5 108 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 FMNL1O95466 1100 aaPredicted RBP18.82■□□□□ 0.6
PTK7-202ENST00000230419 MMP1P03956 469 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 SNAP25P60880 206 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 CNGA4Q8IV77 575 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 SYCP3Q8IZU3 236 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 SPICE1Q8N0Z3 855 aa18.82■□□□□ 0.6
PTK7-202ENST00000230419 ARHGEF1Q92888 912 aaKnown RBP18.82■□□□□ 0.6
PTK7-202ENST00000230419 FAM207AQ9NSI2 230 aaPredicted RBP18.82■□□□□ 0.6
PTK7-202ENST00000230419 RBM6P78332 1123 aaKnown RBP18.81■□□□□ 0.6
PTK7-202ENST00000230419 ENAHQ8N8S7 591 aaPredicted RBP18.81■□□□□ 0.6
PTK7-202ENST00000230419 FAM84BQ96KN1 310 aaPredicted RBP18.81■□□□□ 0.6
PTK7-202ENST00000230419 USP40Q9NVE5 1235 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 IMPACTQ9P2X3 320 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 KIF5AQ12840 1032 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 DNAJC21Q5F1R6 531 aaKnown RBP18.81■□□□□ 0.6
PTK7-202ENST00000230419 GOLGA1Q92805 767 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 LRWD1Q9UFC0 647 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 APBA3O96018 575 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 SF3B2Q13435 895 aaKnown RBP18.81■□□□□ 0.6
PTK7-202ENST00000230419 C3orf67Q6ZVT6 689 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 SH3RF3Q8TEJ3 882 aaPredicted RBP18.81■□□□□ 0.6
PTK7-202ENST00000230419 SNX29Q8TEQ0 813 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 COA7Q96BR5 231 aa18.81■□□□□ 0.6
PTK7-202ENST00000230419 BCCIPQ9P287 314 aaKnown RBP eCLIP18.81■□□□□ 0.6
PTK7-202ENST00000230419 PPP1R12BO60237 982 aaPredicted RBP18.8■□□□□ 0.6
PTK7-202ENST00000230419 TBCAO75347 108 aaKnown RBP18.8■□□□□ 0.6
PTK7-202ENST00000230419 NONOQ15233 471 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTK7-202ENST00000230419 TAX1BP1Q86VP1 789 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 CWC15Q9P013 229 aaKnown RBP18.8■□□□□ 0.6
PTK7-202ENST00000230419 PLCG2P16885 1265 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 PP2D1A8MPX8 630 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 CSF1RP07333 972 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
PTK7-202ENST00000230419 FMR1NBQ8N0W7 255 aaPredicted RBP18.8■□□□□ 0.6
PTK7-202ENST00000230419 KCNF1Q9H3M0 494 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 SPDYE3A6NKU9 549 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 DCAF17Q5H9S7 520 aaPredicted RBP18.8■□□□□ 0.6
PTK7-202ENST00000230419 WDR78Q5VTH9 848 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 IQCEQ6IPM2 695 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 SV2BQ7L1I2 683 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 FERMT2Q96AC1 680 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 FAM107BQ9H098 131 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 GBP3Q9H0R5 595 aa18.8■□□□□ 0.6
PTK7-202ENST00000230419 SERPINB2P05120 415 aa18.79■□□□□ 0.6
PTK7-202ENST00000230419 CABP7Q86V35 215 aa18.79■□□□□ 0.6
PTK7-202ENST00000230419 IBSPP21815 317 aaPredicted RBP18.79■□□□□ 0.6
PTK7-202ENST00000230419 TRIM28Q13263 835 aaKnown RBP18.79■□□□□ 0.6
PTK7-202ENST00000230419 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
PTK7-202ENST00000230419 NLRC4Q9NPP4 1024 aa18.79■□□□□ 0.6
PTK7-202ENST00000230419 MAN1B1Q9UKM7 699 aa18.79■□□□□ 0.6
PTK7-202ENST00000230419 ETF1P62495 437 aaKnown RBP18.79■□□□□ 0.6
PTK7-202ENST00000230419 NFIXQ14938 502 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms