RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Prrt2E9PUL5 346 aa8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Hdac1O09106 482 aaKnown RBP8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Mcm2P97310 904 aa8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Slc39a7Q31125 476 aa8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 BC080695Q66JY9 481 aa8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Tnpo1Q8BFY9 898 aaKnown RBP8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 HnrnpuQ8VEK3 800 aaKnown RBP8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Nr2e3Q9QXZ7 395 aa8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 PalmQ9Z0P4 383 aa8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Efcab12V9GXH0 673 aa8.75□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Cdc27A2A6Q5 825 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Gm7361D3Z6R1 267 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Gm1979E9QAN3 267 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Birc3O08863 600 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Hoxb1P17919 297 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Pde6bP23440 856 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 SnrpnP63163 240 aaKnown RBP8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Foxd3Q61060 465 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Isy1Q69ZQ2 285 aaKnown RBP8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Suz12Q80U70 741 aaKnown RBP8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Mettl3Q8C3P7 580 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Polr3glQ8R0C0 218 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Kdm4cQ8VCD7 1054 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Tas1r3Q925D8 858 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Atg3Q9CPX6 314 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 3100002H09RikQ9CXW6 140 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Slc35a4Q9D321 324 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Trpm7Q923J1 1863 aa8.74□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Miga2Q8BK03 593 aa8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Bend7Q8BSV3 434 aa8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Fam129bQ8R1F1 749 aa8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Mrpl50Q8VDT9 159 aaKnown RBP8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Antxr1Q9CZ52 562 aa8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Cdc37l1Q9CZP7 335 aa8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Gcc1Q9D4H2 778 aa8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 MeiobQ9D513 470 aa8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Ehd4Q9EQP2 541 aa8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Pappa2E9PZ87 1789 aa8.73□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Anapc15-psA0A140T8L6 141 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Wdr63B2RY71 923 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 AU019823E9PUQ3 292 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Terf2O35144 541 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 CfhP06909 1234 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Slurp2P0DP59 97 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Lmnb1P14733 588 aaKnown RBP8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 SelpQ01102 768 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Eif2ak2Q03963 515 aaKnown RBP8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Fstl1Q62356 306 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Slc5a1Q8C3K6 665 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Yod1Q8CB27 343 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Ints5Q8CHT3 1018 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Eif3bQ8JZQ9 803 aaKnown RBP8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Asb16Q8VHS5 453 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Kif2cQ922S8 721 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 PdgfdQ925I7 370 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Sh3bp5lQ99LH9 392 aa8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 AfdnQ9QZQ1 1820 aaKnown RBP8.72□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 Ubr2Q6WKZ8 1755 aa8.71□□□□□ -1.01
Ccdc47-202ENSMUST00000106865 MycP01108 439 aa8.71□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gsx2P31316 305 aa8.71□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 NfkbibQ60778 359 aa8.71□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 RbsnQ80Y56 783 aa8.71□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Tango6Q8C3S2 1079 aa8.71□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Rab11fip3Q8CHD8 1047 aa8.71□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Olfr781Q8VFZ8 311 aa8.71□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Mrpl14Q9D1I6 145 aa8.71□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Mapk7Q9WVS8 806 aa8.71□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 D830030K20RikE9PYQ5 218 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gm3043K7N693 218 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gm16440K7N6G6 218 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gm2244L7N2A3 218 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gm3278L7N2D2 218 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gm8271L7N2E2 218 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Znf143O70230 638 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Tm6sf1P58749 370 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Chl1P70232 1209 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Rbm27Q5SFM8 1060 aaKnown RBP8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Asic4Q7TNS7 539 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Dcaf5Q80T85 946 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gbp9Q8BTS3 619 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Ciapin1Q8WTY4 309 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 CenppQ9CZ92 286 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Stk32bQ9JJX8 414 aa8.7□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Scn11aQ9R053 1765 aa8.69□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Nav1Q8CH77 1875 aa8.69□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gm5624F6ZZG8 207 aa8.69□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Hoxd9P28357 339 aa8.69□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Pcdhb14Q6PB90 796 aa8.69□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Rnf123Q5XPI3 1314 aa8.69□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gm6268A2A3U9 297 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Ccdc9bA3KGF9 545 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Stag2O35638 1231 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Bcl6P41183 707 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Aldh3a2P47740 484 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Sox1P53783 391 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Kif20aP97329 887 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Adcy6Q01341 1165 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Ankmy2Q3TPE9 440 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Irf9Q61179 399 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 1700010I14RikQ7TPG0 532 aa8.68□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms