RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 Gigyf2Q6Y7W8 1291 aaKnown RBP16.31■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Nim1kQ8BHI9 436 aa16.31■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Pof1bQ8K4L4 587 aa16.31■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 RnpepQ8VCT3 650 aaKnown RBP16.31■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Prkag2Q91WG5 566 aa16.31■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Astn1Q61137 1302 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 RptorQ8K4Q0 1335 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Gm3138K7N754 218 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Copb2O55029 905 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 NapbP28663 298 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Nf2P46662 596 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Csrnp3P59055 597 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 NfiaQ02780 532 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Zfp957Q3UT76 567 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Ecm1Q61508 559 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Usp50Q6P8X6 390 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Tacc1Q6Y685 774 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Tmod4Q9JLH8 345 aa16.3■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 TxnP10639 105 aaKnown RBP16.29■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 SqleP52019 572 aa16.29■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Smoc2Q8CD91 447 aa16.29■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 StrbpQ91WM1 672 aaKnown RBP16.29■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 BaatQ91X34 420 aa16.29■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Tomm22Q9CPQ3 142 aa16.29■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Myh7bA2AQP0 1941 aa16.28■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Rabgap1A2AWA9 1064 aa16.28■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Slc4a3P16283 1227 aa16.28■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Ccdc27Q3V036 639 aa16.28■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Gm10392Q3V3I3 114 aa16.28■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Ddx11Q6AXC6 880 aa16.28■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Serpinb13Q8CDC0 389 aa16.28■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Crlf2Q8CII9 359 aa16.28■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Pspc1Q8R326 523 aaKnown RBP16.28■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Ncor1Q60974 2453 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 AampJ3QN89 436 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 NfkbieO54910 364 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 MycP01108 439 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Alppl2P24823 529 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Hs1bp3Q3TC93 395 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Pls1Q3V0K9 630 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Atp13a3Q5XF89 1219 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Hand2Q61039 217 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Supt20hQ7TT00 530 aaKnown RBP16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Senp7Q8BUH8 1037 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 MslnlQ8C160 685 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 AidaQ8C4Q6 305 aa16.27■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Gm44511A0A0N4SW10 223 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Btnl4A2CG29 586 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Cd3dP04235 173 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Klrb1bP27812 223 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Irs1P35569 1233 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Hmgcs2P54869 508 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Tmem63bQ3TWI9 832 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Miga1Q4QQM5 600 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Ddx4Q61496 702 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Ms4a5Q810P8 197 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Vgll2Q8BGW8 322 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Tbc1d10bQ8BHL3 798 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Gprasp2Q8BUY8 826 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Lrrc56Q8K375 552 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Nup133Q8R0G9 1155 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Nr3c2Q8VII8 978 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Ttll1Q91V51 423 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Dnajc17Q91WT4 303 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Adgrf4Q9D2L6 698 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 4921524L21RikQ9D5T2 438 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Trmt112Q9DCG9 125 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Tjp3Q9QXY1 905 aa16.26■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Nlrc5C3VPR6 1915 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Plxnb3Q9QY40 1902 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Szt2A2A9C3 3431 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Pramef17A2ASJ1 475 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Pitpnm1O35954 1243 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Il13ra2O88786 383 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Pgk2P09041 417 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Stat3P42227 770 aaKnown RBP16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Swap70Q6A028 585 aaKnown RBP16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Dpp9Q8BVG4 862 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Smc1bQ920F6 1248 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Ddx50Q99MJ9 734 aaKnown RBP16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Clip2Q9Z0H8 1047 aa16.25■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Zscan18E9PUD6 809 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Pdzrn4E9PUZ9 1014 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Zkscan2G3X952 960 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Gml2G5E8L7 176 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Slc1a4O35874 532 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Snap25P60879 206 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Stim2P83093 746 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Ttbk2Q3UVR3 1243 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Zbtb7bQ64321 544 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Filip1lQ6P6L0 1131 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Cyp26b1Q811W2 512 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Prr11Q8BHE0 368 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Nek11Q8C0Q4 628 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Morc2bQ8C5W4 1022 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 MyripQ8K3I4 856 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Pqbp1Q91VJ5 263 aaKnown RBP16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Pcdhgc5Q91XW9 944 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Erc1Q99MI1 1120 aa16.24■□□□□ 0.19
Ccdc58-201ENSMUST00000099937 Lonrf3Q9D4H7 753 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms