RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 VPS5Q92331 675 aa3.3□□□□□ -1.88
snR42snR42 RPS3P05750 240 aaKnown RBP3.29□□□□□ -1.88
snR42snR42 MSF1P08425 469 aa3.29□□□□□ -1.88
snR42snR42 HEM3P28789 327 aa3.29□□□□□ -1.88
snR42snR42 SEC1P30619 724 aaKnown RBP3.29□□□□□ -1.88
snR42snR42 SPC110P32380 944 aa3.29□□□□□ -1.88
snR42snR42 STE13P33894 931 aa3.29□□□□□ -1.88
snR42snR42 TCD2P36101 447 aaKnown RBP3.29□□□□□ -1.88
snR42snR42 MRPL10P36520 322 aa3.29□□□□□ -1.88
snR42snR42 ECM13P38195 257 aa3.29□□□□□ -1.88
snR42snR42 TIF5P38431 405 aaKnown RBP3.29□□□□□ -1.88
snR42snR42 RTT107P38850 1070 aa3.29□□□□□ -1.88
snR42snR42 HEM14P40012 539 aa3.29□□□□□ -1.88
snR42snR42 VFA1P40080 203 aa3.29□□□□□ -1.88
snR42snR42 YER189WP40104 122 aa3.29□□□□□ -1.88
snR42snR42 OSW5P40219 148 aa3.29□□□□□ -1.88
snR42snR42 ATF1P40353 525 aa3.29□□□□□ -1.88
snR42snR42 RMD8P43620 662 aa3.29□□□□□ -1.88
snR42snR42 RTT101P47050 842 aa3.29□□□□□ -1.88
snR42snR42 TAD1P53065 400 aa3.29□□□□□ -1.88
snR42snR42 YGR283CP53336 341 aaPredicted RBP3.29□□□□□ -1.88
snR42snR42 TRM112P53738 135 aaPredicted RBP3.29□□□□□ -1.88
snR42snR42 JJJ1P53863 590 aa3.29□□□□□ -1.88
snR42snR42 KTR6P54070 446 aa3.29□□□□□ -1.88
snR42snR42 PIR3Q03180 325 aa3.29□□□□□ -1.88
snR42snR42 YMR206WQ03695 313 aa3.29□□□□□ -1.88
snR42snR42 GYL1Q04322 720 aa3.29□□□□□ -1.88
snR42snR42 DAL4Q04895 635 aa3.29□□□□□ -1.88
snR42snR42 RTN1Q04947 295 aaKnown RBP3.29□□□□□ -1.88
snR42snR42 PEX15Q08215 383 aa3.29□□□□□ -1.88
snR42snR42 THI21Q08975 551 aa3.29□□□□□ -1.88
snR42snR42 BEM2P39960 2167 aaKnown RBP3.29□□□□□ -1.88
snR42snR42 FAB1P34756 2278 aa3.28□□□□□ -1.88
snR42snR42 MSB2P32334 1306 aa3.28□□□□□ -1.88
snR42snR42 HIS1P00498 297 aaKnown RBP3.28□□□□□ -1.88
snR42snR42 CYC8P14922 966 aa3.28□□□□□ -1.88
snR42snR42 TUP1P16649 713 aa3.28□□□□□ -1.88
snR42snR42 SPO12P17123 173 aa3.28□□□□□ -1.88
snR42snR42 MET16P18408 261 aaPredicted RBP3.28□□□□□ -1.88
snR42snR42 RRP43P25359 394 aaPredicted RBP3.28□□□□□ -1.88
snR42snR42 IME2P32581 645 aa3.28□□□□□ -1.88
snR42snR42 MRP4P32902 394 aa3.28□□□□□ -1.88
snR42snR42 MIC60P36112 540 aa3.28□□□□□ -1.88
snR42snR42 SRP68P38687 599 aaKnown RBP3.28□□□□□ -1.88
snR42snR42 LYS9P38999 446 aa3.28□□□□□ -1.88
snR42snR42 PLB1P39105 664 aa3.28□□□□□ -1.88
snR42snR42 YMR124WP39523 943 aaKnown RBP3.28□□□□□ -1.88
snR42snR42 VAC8P39968 578 aa3.28□□□□□ -1.88
snR42snR42 TMN3P40071 706 aa3.28□□□□□ -1.88
snR42snR42 YIL054WP40524 105 aa3.28□□□□□ -1.88
snR42snR42 SNZ3P43545 298 aa3.28□□□□□ -1.88
snR42snR42 PYK2P52489 506 aaKnown RBP3.28□□□□□ -1.88
snR42snR42 VEL1P53058 206 aa3.28□□□□□ -1.88
snR42snR42 YGR111WP53265 400 aa3.28□□□□□ -1.88
snR42snR42 SNZ2P53824 298 aa3.28□□□□□ -1.88
snR42snR42 VPS75P53853 264 aa3.28□□□□□ -1.88
snR42snR42 BET4Q00618 327 aa3.28□□□□□ -1.88
snR42snR42 RPN4Q03465 531 aa3.28□□□□□ -1.88
snR42snR42 ADI1Q03677 179 aa3.28□□□□□ -1.88
snR42snR42 SND1Q04007 877 aa3.28□□□□□ -1.88
snR42snR42 YSH1Q06224 779 aaPredicted RBP3.28□□□□□ -1.88
snR42snR42 ATG9Q12142 997 aa3.28□□□□□ -1.88
snR42snR42 BI2P03873 423 aa3.27□□□□□ -1.89
snR42snR42 BI4P03879 638 aa3.27□□□□□ -1.89
snR42snR42 HSF1P10961 833 aa3.27□□□□□ -1.89
snR42snR42 PYC1P11154 1178 aaKnown RBP3.27□□□□□ -1.89
snR42snR42 REV1P12689 985 aa3.27□□□□□ -1.89
snR42snR42 PUT4P15380 627 aa3.27□□□□□ -1.89
snR42snR42 FPR1P20081 114 aaKnown RBP3.27□□□□□ -1.89
snR42snR42 TRX1P22217 103 aaKnown RBP3.27□□□□□ -1.89
snR42snR42 ADY2P25613 283 aa3.27□□□□□ -1.89
snR42snR42 DBF4P32325 704 aa3.27□□□□□ -1.89
snR42snR42 GCD6P32501 712 aaKnown RBP3.27□□□□□ -1.89
snR42snR42 MRPL40P36534 297 aa3.27□□□□□ -1.89
snR42snR42 RKM3P38222 552 aa3.27□□□□□ -1.89
snR42snR42 ERP5P38819 212 aa3.27□□□□□ -1.89
snR42snR42 DUN1P39009 513 aa3.27□□□□□ -1.89
snR42snR42 PCF11P39081 626 aaPredicted RBP3.27□□□□□ -1.89
snR42snR42 STL1P39932 569 aa3.27□□□□□ -1.89
snR42snR42 TAN1P53072 289 aaPredicted RBP3.27□□□□□ -1.89
snR42snR42 FLC3P53121 802 aa3.27□□□□□ -1.89
snR42snR42 PEX31P53203 462 aa3.27□□□□□ -1.89
snR42snR42 YPL014WQ02606 381 aa3.27□□□□□ -1.89
snR42snR42 YPL109CQ02981 657 aa3.27□□□□□ -1.89
snR42snR42 SXM1Q04175 944 aaKnown RBP3.27□□□□□ -1.89
snR42snR42 ARA2Q04212 335 aa3.27□□□□□ -1.89
snR42snR42 AIM32Q04689 311 aa3.27□□□□□ -1.89
snR42snR42 YDR222WQ04925 415 aa3.27□□□□□ -1.89
snR42snR42 ECM38Q05902 660 aaPredicted RBP3.27□□□□□ -1.89
snR42snR42 YDL073WQ07454 984 aa3.27□□□□□ -1.89
snR42snR42 YLR012CQ07927 99 aa3.27□□□□□ -1.89
snR42snR42 NDD1Q08887 554 aa3.27□□□□□ -1.89
snR42snR42 PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
snR42snR42 LCB4Q12246 624 aa3.27□□□□□ -1.89
snR42snR42 SEY1Q99287 776 aa3.27□□□□□ -1.89
snR42snR42 BI3Q9ZZW7 517 aa3.27□□□□□ -1.89
snR42snR42 TOR2P32600 2474 aaKnown RBP3.27□□□□□ -1.89
snR42snR42 MTF2P10849 440 aa3.26□□□□□ -1.89
snR42snR42 SST2P11972 698 aaKnown RBP3.26□□□□□ -1.89
snR42snR42 YPK1P12688 680 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms