RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W TIF5P38431 405 aaKnown RBP0.41□□□□□ -2.34
RDS3YPR094W SEC31P38968 1273 aaKnown RBP0.41□□□□□ -2.34
RDS3YPR094W IDS2P46958 469 aa0.41□□□□□ -2.34
RDS3YPR094W UBX6P47049 396 aa0.41□□□□□ -2.34
RDS3YPR094W COS10P52924 374 aa0.41□□□□□ -2.34
RDS3YPR094W ASI1P54074 624 aa0.41□□□□□ -2.34
RDS3YPR094W ATG21Q02887 496 aa0.41□□□□□ -2.34
RDS3YPR094W TFB2Q02939 513 aa0.41□□□□□ -2.34
RDS3YPR094W RPN4Q03465 531 aa0.41□□□□□ -2.34
RDS3YPR094W CRF1Q04930 467 aa0.41□□□□□ -2.34
RDS3YPR094W MHR1Q06630 226 aa0.41□□□□□ -2.34
RDS3YPR094W YOR378WQ08902 515 aa0.41□□□□□ -2.34
RDS3YPR094W YLR125WQ12138 136 aa0.41□□□□□ -2.34
RDS3YPR094W COX1P00401 534 aa0.4□□□□□ -2.35
RDS3YPR094W RPL15AP05748 204 aaKnown RBP0.4□□□□□ -2.35
RDS3YPR094W MCK1P21965 375 aaKnown RBP0.4□□□□□ -2.35
RDS3YPR094W PRP19P32523 503 aaKnown RBP0.4□□□□□ -2.35
RDS3YPR094W SIP1P32578 815 aa0.4□□□□□ -2.35
RDS3YPR094W SPR1P32603 445 aa0.4□□□□□ -2.35
RDS3YPR094W PPG1P32838 368 aa0.4□□□□□ -2.35
RDS3YPR094W RPH1P39956 796 aa0.4□□□□□ -2.35
RDS3YPR094W ARB1P40024 610 aaKnown RBP0.4□□□□□ -2.35
RDS3YPR094W YJL068CP40363 299 aa0.4□□□□□ -2.35
RDS3YPR094W HXT9P40885 567 aa0.4□□□□□ -2.35
RDS3YPR094W YJL213WP40896 331 aa0.4□□□□□ -2.35
RDS3YPR094W RTS2P40962 232 aa0.4□□□□□ -2.35
RDS3YPR094W DIM1P41819 318 aaKnown RBP0.4□□□□□ -2.35
RDS3YPR094W IRC5P43610 853 aa0.4□□□□□ -2.35
RDS3YPR094W YJL132WP47014 750 aa0.4□□□□□ -2.35
RDS3YPR094W HLJ1P48353 224 aa0.4□□□□□ -2.35
RDS3YPR094W MNT2P53059 558 aa0.4□□□□□ -2.35
RDS3YPR094W YGL039WP53183 348 aaKnown RBP0.4□□□□□ -2.35
RDS3YPR094W YLR152CP54072 576 aa0.4□□□□□ -2.35
RDS3YPR094W YMR178WQ03219 274 aaKnown RBP0.4□□□□□ -2.35
RDS3YPR094W PAL1Q05518 499 aaKnown RBP0.4□□□□□ -2.35
RDS3YPR094W YLR455WQ06188 304 aa0.4□□□□□ -2.35
RDS3YPR094W FAP7Q12055 197 aaPredicted RBP0.4□□□□□ -2.35
RDS3YPR094W RTK1Q12100 620 aaPredicted RBP0.4□□□□□ -2.35
RDS3YPR094W NOP56Q12460 504 aaKnown RBP RIP-Chip data0.4□□□□□ -2.35not detected
RDS3YPR094W PRP45P28004 379 aaPredicted RBP0.39□□□□□ -2.35
RDS3YPR094W LAC1P28496 418 aa0.39□□□□□ -2.35
RDS3YPR094W SWC3P31376 625 aa0.39□□□□□ -2.35
RDS3YPR094W SER1P33330 395 aaKnown RBP0.39□□□□□ -2.35
RDS3YPR094W RPR2P40571 144 aa0.39□□□□□ -2.35
RDS3YPR094W MAD2P40958 196 aa0.39□□□□□ -2.35
RDS3YPR094W IAH1P41734 238 aa0.39□□□□□ -2.35
RDS3YPR094W GZF3P42944 551 aaKnown RBP0.39□□□□□ -2.35
RDS3YPR094W YFR016CP43597 1233 aaKnown RBP0.39□□□□□ -2.35
RDS3YPR094W GUF1P46943 645 aa0.39□□□□□ -2.35
RDS3YPR094W SDT1P53078 280 aa0.39□□□□□ -2.35
RDS3YPR094W YRB30P53107 440 aaPredicted RBP0.39□□□□□ -2.35
RDS3YPR094W SGF73P53165 657 aa0.39□□□□□ -2.35
RDS3YPR094W SDA1P53313 767 aaKnown RBP0.39□□□□□ -2.35
RDS3YPR094W PTA1Q01329 785 aaPredicted RBP0.39□□□□□ -2.35
RDS3YPR094W CTL1Q03220 320 aaKnown RBP0.39□□□□□ -2.35
RDS3YPR094W TMA64Q04600 565 aaKnown RBP0.39□□□□□ -2.35
RDS3YPR094W HCR1Q05775 265 aaKnown RBP0.39□□□□□ -2.35
RDS3YPR094W STP3Q05937 343 aa0.39□□□□□ -2.35
RDS3YPR094W MCP2Q06567 569 aa0.39□□□□□ -2.35
RDS3YPR094W VPS5Q92331 675 aa0.39□□□□□ -2.35
RDS3YPR094W CHO1P08456 276 aa0.38□□□□□ -2.35
RDS3YPR094W STE50P25344 346 aa0.38□□□□□ -2.35
RDS3YPR094W YKL091CP33324 310 aaKnown RBP0.38□□□□□ -2.35
RDS3YPR094W RFS1P38234 210 aaKnown RBP0.38□□□□□ -2.35
RDS3YPR094W SRP68P38687 599 aaKnown RBP0.38□□□□□ -2.35
RDS3YPR094W YER130CP39959 443 aa0.38□□□□□ -2.35
RDS3YPR094W RPT2P40327 437 aaKnown RBP0.38□□□□□ -2.35
RDS3YPR094W MNN11P46985 422 aaKnown RBP0.38□□□□□ -2.35
RDS3YPR094W YNR071CP53757 342 aa0.38□□□□□ -2.35
RDS3YPR094W DNM1P54861 757 aa0.38□□□□□ -2.35
RDS3YPR094W MAK10Q02197 733 aa0.38□□□□□ -2.35
RDS3YPR094W MTQ2Q03920 221 aaPredicted RBP0.38□□□□□ -2.35
RDS3YPR094W HOS1Q12214 470 aa0.38□□□□□ -2.35
RDS3YPR094W SET6Q12529 373 aa0.38□□□□□ -2.35
RDS3YPR094W EDE1P34216 1381 aa0.37□□□□□ -2.35
RDS3YPR094W SUI3P09064 285 aaKnown RBP0.37□□□□□ -2.35
RDS3YPR094W MRP2P10663 115 aaPredicted RBP0.37□□□□□ -2.35
RDS3YPR094W PCT1P13259 424 aa0.37□□□□□ -2.35
RDS3YPR094W YIM1P28625 365 aa0.37□□□□□ -2.35
RDS3YPR094W ERG1P32476 496 aaKnown RBP0.37□□□□□ -2.35
RDS3YPR094W PET309P32522 965 aaPredicted RBP0.37□□□□□ -2.35
RDS3YPR094W DID4P36108 232 aa0.37□□□□□ -2.35
RDS3YPR094W SWD3P38123 315 aa0.37□□□□□ -2.35
RDS3YPR094W EMP65P40085 556 aa0.37□□□□□ -2.35
RDS3YPR094W PEA2P40091 420 aa0.37□□□□□ -2.35
RDS3YPR094W IDP2P41939 412 aa0.37□□□□□ -2.35
RDS3YPR094W IKS1P47042 667 aa0.37□□□□□ -2.35
RDS3YPR094W RTT101P47050 842 aa0.37□□□□□ -2.35
RDS3YPR094W RPM2Q02773 1202 aa0.37□□□□□ -2.35
RDS3YPR094W TRS31Q03337 283 aa0.37□□□□□ -2.35
RDS3YPR094W ARP10Q04549 284 aa0.37□□□□□ -2.35
RDS3YPR094W YOL159CQ08300 171 aa0.37□□□□□ -2.35
RDS3YPR094W YOL098CQ12496 1037 aa0.37□□□□□ -2.35
RDS3YPR094W YBR255C-AQ3E776 120 aa0.37□□□□□ -2.35
RDS3YPR094W YCL021W-AQ96VH3 125 aa0.37□□□□□ -2.35
RDS3YPR094W POL3P15436 1097 aa0.36□□□□□ -2.35
RDS3YPR094W RPL8AP17076 256 aaKnown RBP0.36□□□□□ -2.35
RDS3YPR094W ISY1P21374 235 aaPredicted RBP0.36□□□□□ -2.35
RDS3YPR094W PDE1P22434 369 aa0.36□□□□□ -2.35
RDS3YPR094W GID7P25569 745 aa0.36□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms