RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USV1	YPL230W	YPT10	P38146	199 aa		4.18	□□□□□ -1.74
USV1	YPL230W	LNP1	P38878	278 aa		4.18	□□□□□ -1.74
USV1	YPL230W	YIL161W	P40449	235 aa	Known RBP	4.18	□□□□□ -1.74
USV1	YPL230W	THI6	P41835	540 aa		4.18	□□□□□ -1.74
USV1	YPL230W	PMT6	P42934	759 aa		4.18	□□□□□ -1.74
USV1	YPL230W	ARC1	P46672	376 aa	Known RBP	4.18	□□□□□ -1.74
USV1	YPL230W	VPS4	P52917	437 aa		4.18	□□□□□ -1.74
USV1	YPL230W	YGR079W	P53249	370 aa		4.18	□□□□□ -1.74
USV1	YPL230W	YNL092W	P53934	400 aa		4.18	□□□□□ -1.74
USV1	YPL230W	YML119W	Q03208	357 aa		4.18	□□□□□ -1.74
USV1	YPL230W	YDR179W-A	Q03983	463 aa		4.18	□□□□□ -1.74
USV1	YPL230W	MFB1	Q04922	465 aa		4.18	□□□□□ -1.74
USV1	YPL230W	PSK2	Q08217	1101 aa		4.18	□□□□□ -1.74
USV1	YPL230W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
USV1	YPL230W	BMS1	Q08965	1183 aa	Known RBP	4.18	□□□□□ -1.74
USV1	YPL230W	PRS5	Q12265	496 aa	Known RBP	4.18	□□□□□ -1.74
USV1	YPL230W	YBR255C-A	Q3E776	120 aa		4.18	□□□□□ -1.74
USV1	YPL230W	SUI3	P09064	285 aa	Known RBP	4.17	□□□□□ -1.74
USV1	YPL230W	YML003W	P0CF16	290 aa		4.17	□□□□□ -1.74
USV1	YPL230W	AMD2	P22580	549 aa		4.17	□□□□□ -1.74
USV1	YPL230W	SAC6	P32599	642 aa	Known RBP	4.17	□□□□□ -1.74
USV1	YPL230W	UGP1	P32861	499 aa	Known RBP	4.17	□□□□□ -1.74
USV1	YPL230W	ALY1	P36117	915 aa		4.17	□□□□□ -1.74
USV1	YPL230W	YBR225W	P38321	900 aa		4.17	□□□□□ -1.74
USV1	YPL230W	PFK26	P40433	827 aa	Known RBP	4.17	□□□□□ -1.74
USV1	YPL230W	ARE2	P53629	642 aa	Known RBP	4.17	□□□□□ -1.74
USV1	YPL230W	YNR061C	P53747	219 aa		4.17	□□□□□ -1.74
USV1	YPL230W	RAD30	Q04049	632 aa		4.17	□□□□□ -1.74
USV1	YPL230W	SWT1	Q12104	458 aa		4.17	□□□□□ -1.74
USV1	YPL230W	TAH18	Q12181	623 aa		4.17	□□□□□ -1.74
USV1	YPL230W	YBR126W-A	Q8TGU7	68 aa		4.17	□□□□□ -1.74
USV1	YPL230W	SPO16	P17122	198 aa		4.16	□□□□□ -1.74
USV1	YPL230W	LRE1	P25579	583 aa	Known RBP	4.16	□□□□□ -1.74
USV1	YPL230W	LOT5	P34234	306 aa		4.16	□□□□□ -1.74
USV1	YPL230W	KTR3	P38130	404 aa	Predicted RBP	4.16	□□□□□ -1.74
USV1	YPL230W	NPR2	P39923	615 aa		4.16	□□□□□ -1.74
USV1	YPL230W	IRC6	P43615	237 aa		4.16	□□□□□ -1.74
USV1	YPL230W	SGM1	P47166	707 aa		4.16	□□□□□ -1.74
USV1	YPL230W	MRPL19	P53875	158 aa		4.16	□□□□□ -1.74
USV1	YPL230W	INN1	P53901	409 aa		4.16	□□□□□ -1.74
USV1	YPL230W	NGL3	Q03210	505 aa		4.16	□□□□□ -1.74
USV1	YPL230W	GTB1	Q04924	702 aa		4.16	□□□□□ -1.74
USV1	YPL230W	CIR2	Q08822	631 aa		4.16	□□□□□ -1.74
USV1	YPL230W	TGS1	Q12052	315 aa		4.16	□□□□□ -1.74
USV1	YPL230W	NUS1	Q12063	375 aa		4.16	□□□□□ -1.74
USV1	YPL230W	HUA2	Q12134	243 aa		4.16	□□□□□ -1.74
USV1	YPL230W	ERG27	Q12452	347 aa	Known RBP	4.16	□□□□□ -1.74
USV1	YPL230W	YOR019W	Q99248	730 aa		4.16	□□□□□ -1.74
USV1	YPL230W	PGS1	P25578	521 aa		4.15	□□□□□ -1.75
USV1	YPL230W	RFA2	P26754	273 aa	Known RBP	4.15	□□□□□ -1.75
USV1	YPL230W	PIH1	P38768	344 aa		4.15	□□□□□ -1.75
USV1	YPL230W	MIT1	P40002	666 aa		4.15	□□□□□ -1.75
USV1	YPL230W	TPA1	P40032	644 aa	Known RBP	4.15	□□□□□ -1.75
USV1	YPL230W	VTC2	P43585	828 aa		4.15	□□□□□ -1.75
USV1	YPL230W	DSD1	P53095	428 aa		4.15	□□□□□ -1.75
USV1	YPL230W	UBP16	Q02863	499 aa		4.15	□□□□□ -1.75
USV1	YPL230W	NGL2	Q03264	515 aa	Known RBP	4.15	□□□□□ -1.75
USV1	YPL230W	TAF11	Q04226	346 aa		4.15	□□□□□ -1.75
USV1	YPL230W	RIX7	Q07844	837 aa	Known RBP	4.15	□□□□□ -1.75
USV1	YPL230W	HSH49	Q99181	213 aa	Predicted RBP	4.15	□□□□□ -1.75
USV1	YPL230W	AAC1	P04710	309 aa		4.14	□□□□□ -1.75
USV1	YPL230W	SEC53	P07283	254 aa	Known RBP	4.14	□□□□□ -1.75
USV1	YPL230W	KAR3	P17119	729 aa		4.14	□□□□□ -1.75
USV1	YPL230W	YCK1	P23291	538 aa		4.14	□□□□□ -1.75
USV1	YPL230W	YMC1	P32331	307 aa		4.14	□□□□□ -1.75
USV1	YPL230W	SIP1	P32578	815 aa		4.14	□□□□□ -1.75
USV1	YPL230W	GDA1	P32621	518 aa		4.14	□□□□□ -1.75
USV1	YPL230W	RGT1	P32862	1170 aa		4.14	□□□□□ -1.75
USV1	YPL230W	BLI1	P35727	113 aa		4.14	□□□□□ -1.75
USV1	YPL230W	YMC2	P38087	329 aa		4.14	□□□□□ -1.75
USV1	YPL230W	MTG2	P38860	518 aa		4.14	□□□□□ -1.75
USV1	YPL230W	JHD1	P40034	492 aa		4.14	□□□□□ -1.75
USV1	YPL230W	RMD8	P43620	662 aa		4.14	□□□□□ -1.75
USV1	YPL230W	TAX4	P47030	604 aa		4.14	□□□□□ -1.75
USV1	YPL230W	NPA3	P47122	385 aa		4.14	□□□□□ -1.75
USV1	YPL230W	AAD10	P47182	288 aa		4.14	□□□□□ -1.75
USV1	YPL230W	MRX6	P48564	524 aa		4.14	□□□□□ -1.75
USV1	YPL230W	PIL1	P53252	339 aa	Known RBP	4.14	□□□□□ -1.75
USV1	YPL230W	YML053C	Q04978	212 aa		4.14	□□□□□ -1.75
USV1	YPL230W	ATG23	Q06671	453 aa		4.14	□□□□□ -1.75
USV1	YPL230W	YDL073W	Q07454	984 aa		4.14	□□□□□ -1.75
USV1	YPL230W	YDL242W	Q07746	117 aa		4.14	□□□□□ -1.75
USV1	YPL230W	CRT10	Q08226	957 aa		4.14	□□□□□ -1.75
USV1	YPL230W	Q0010	Q9ZZX9	128 aa		4.14	□□□□□ -1.75
USV1	YPL230W	CET1	O13297	549 aa	Predicted RBP	4.13	□□□□□ -1.75
USV1	YPL230W	COX1	P00401	534 aa		4.13	□□□□□ -1.75
USV1	YPL230W	GCN4	P03069	281 aa		4.13	□□□□□ -1.75
USV1	YPL230W	ARG3	P05150	338 aa		4.13	□□□□□ -1.75
USV1	YPL230W	CHO2	P05374	869 aa	Known RBP	4.13	□□□□□ -1.75
USV1	YPL230W	KGD2	P19262	463 aa	Predicted RBP	4.13	□□□□□ -1.75
USV1	YPL230W	RNR3	P21672	869 aa	Known RBP	4.13	□□□□□ -1.75
USV1	YPL230W	PRE8	P23639	250 aa		4.13	□□□□□ -1.75
USV1	YPL230W	SRB5	P32585	307 aa		4.13	□□□□□ -1.75
USV1	YPL230W	NPL6	P32832	435 aa		4.13	□□□□□ -1.75
USV1	YPL230W	NOP4	P37838	685 aa	Known RBP	4.13	□□□□□ -1.75
USV1	YPL230W	YBL029W	P38201	376 aa		4.13	□□□□□ -1.75
USV1	YPL230W	RKM3	P38222	552 aa		4.13	□□□□□ -1.75
USV1	YPL230W	ERC1	P38767	581 aa		4.13	□□□□□ -1.75
USV1	YPL230W	MAM1	P40065	302 aa		4.13	□□□□□ -1.75
USV1	YPL230W	SLZ1	P40167	298 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms