RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	ATG4	P53867	494 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	YPL071C	Q02864	156 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	YMR155W	Q03795	547 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	THI22	Q06490	572 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	VHS3	Q08438	674 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	ZRT2	Q12436	422 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	RVB2	Q12464	471 aa	Known RBP	4.18	□□□□□ -1.74
GCD1	YOR260W	PAR32	Q12515	295 aa	Known RBP	4.18	□□□□□ -1.74
GCD1	YOR260W	ENT1	Q12518	454 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	YBL111C	Q3E7Y5	667 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	CTT1	P06115	562 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	SWI6	P09959	803 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	DBP3	P20447	523 aa	Known RBP	4.18	□□□□□ -1.74
GCD1	YOR260W	MNE1	P24720	663 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	EFB1	P32471	206 aa	Known RBP	4.18	□□□□□ -1.74
GCD1	YOR260W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
GCD1	YOR260W	UIP5	P36137	443 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	EFM2	P38347	419 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	RIX1	P38883	763 aa	Predicted RBP	4.18	□□□□□ -1.74
GCD1	YOR260W	STL1	P39932	569 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	YEL068C	P39977	110 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	ALD5	P40047	520 aa	Known RBP	4.18	□□□□□ -1.74
GCD1	YOR260W	YJL068C	P40363	299 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	CTR1	P49573	406 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	RPN14	P53196	417 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	YNR068C	P53754	272 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	DIB1	Q06819	143 aa	Predicted RBP	4.18	□□□□□ -1.74
GCD1	YOR260W	YTM1	Q12024	460 aa	Predicted RBP	4.18	□□□□□ -1.74
GCD1	YOR260W	ADF1	Q2V2Q1	113 aa		4.18	□□□□□ -1.74
GCD1	YOR260W	GEA1	P47102	1408 aa	Predicted RBP	4.17	□□□□□ -1.74
GCD1	YOR260W	CLC1	P17891	233 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	IME1	P21190	360 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	PRP28	P23394	588 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	PHO84	P25297	587 aa	Known RBP	4.17	□□□□□ -1.74
GCD1	YOR260W	ADY2	P25613	283 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	NIP1	P32497	812 aa	Known RBP	4.17	□□□□□ -1.74
GCD1	YOR260W	VPS17	P32913	551 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	SWH1	P35845	1188 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	YKT6	P36015	200 aa	Known RBP	4.17	□□□□□ -1.74
GCD1	YOR260W	GLG1	P36143	616 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	YKR075C	P36155	307 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	PCH2	P38126	564 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	RTS1	P38903	757 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	AXL2	P38928	823 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	DUN1	P39009	513 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	KAP123	P40069	1113 aa	Known RBP	4.17	□□□□□ -1.74
GCD1	YOR260W	CIR1	P42940	261 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	EPL1	P43572	832 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	LYS4	P49367	693 aa	Predicted RBP	4.17	□□□□□ -1.74
GCD1	YOR260W	NOP6	Q07623	225 aa	Known RBP	4.17	□□□□□ -1.74
GCD1	YOR260W	APL4	Q12028	832 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	USV1	Q12132	391 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	FRE6	Q12473	712 aa		4.17	□□□□□ -1.74
GCD1	YOR260W	TUB1	P09733	447 aa	Known RBP	4.16	□□□□□ -1.74
GCD1	YOR260W	FRS1	P15624	595 aa	Known RBP	4.16	□□□□□ -1.74
GCD1	YOR260W	ILV6	P25605	309 aa	Known RBP	4.16	□□□□□ -1.74
GCD1	YOR260W	SEC65	P29478	273 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	NTG1	P31378	399 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	PEX2	P32800	271 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	EMP70	P32802	667 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	BCS1	P32839	456 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	MDL1	P33310	695 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	OAF3	P36023	863 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	FLO10	P36170	1169 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	TIF5	P38431	405 aa	Known RBP	4.16	□□□□□ -1.74
GCD1	YOR260W	NPR2	P39923	615 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	UTP18	P40362	594 aa	Predicted RBP	4.16	□□□□□ -1.74
GCD1	YOR260W	SEC28	P40509	296 aa	Known RBP	4.16	□□□□□ -1.74
GCD1	YOR260W	PXA1	P41909	870 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	MNN11	P46985	422 aa	Known RBP	4.16	□□□□□ -1.74
GCD1	YOR260W	ARC35	P53731	342 aa	Known RBP	4.16	□□□□□ -1.74
GCD1	YOR260W	YPL107W	Q02873	248 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	PEX25	Q02969	394 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	YMR210W	Q03649	449 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	YHM2	Q04013	314 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	ADE13	Q05911	482 aa	Known RBP	4.16	□□□□□ -1.74
GCD1	YOR260W	STP4	Q07351	490 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	HFI1	Q12060	488 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	YOL114C	Q12322	202 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	SPP41	P38904	1435 aa		4.16	□□□□□ -1.74
GCD1	YOR260W	SEM1	O94742	89 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	GLN4	P13188	809 aa	Known RBP	4.15	□□□□□ -1.74
GCD1	YOR260W	PHO81	P17442	1178 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	RRP43	P25359	394 aa	Predicted RBP	4.15	□□□□□ -1.74
GCD1	YOR260W	SPS22	P25380	463 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	DBF4	P32325	704 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	YBR225W	P38321	900 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	BIT2	P38346	545 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	AIM10	P39965	576 aa	Known RBP	4.15	□□□□□ -1.74
GCD1	YOR260W	INA22	P40576	216 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	MKT1	P40850	830 aa	Known RBP	4.15	□□□□□ -1.74
GCD1	YOR260W	BIT61	P47041	543 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	EFM5	P53200	248 aa	Known RBP	4.15	□□□□□ -1.74
GCD1	YOR260W	NOP15	P53927	220 aa	Predicted RBP	4.15	□□□□□ -1.74
GCD1	YOR260W	TOF2	Q02208	771 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	MFB1	Q04922	465 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	ARO10	Q06408	635 aa		4.15	□□□□□ -1.74
GCD1	YOR260W	MET17	P06106	444 aa		4.15	□□□□□ -1.75
GCD1	YOR260W	CKA1	P15790	372 aa		4.15	□□□□□ -1.75
GCD1	YOR260W	ROX1	P25042	368 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms