RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	BNA1	P47096	177 aa		3.6	□□□□□ -1.83
VAM10	YOR068C	RAD17	P48581	401 aa		3.6	□□□□□ -1.83
VAM10	YOR068C	CTR1	P49573	406 aa		3.6	□□□□□ -1.83
VAM10	YOR068C	EFR3	Q03653	782 aa	Known RBP	3.6	□□□□□ -1.83
VAM10	YOR068C	UFO1	Q04511	668 aa		3.6	□□□□□ -1.83
VAM10	YOR068C	SMD2	Q06217	110 aa	Known RBP	3.6	□□□□□ -1.83
VAM10	YOR068C	MCP2	Q06567	569 aa		3.6	□□□□□ -1.83
VAM10	YOR068C	AAD4	Q07747	329 aa		3.6	□□□□□ -1.83
VAM10	YOR068C	APL4	Q12028	832 aa		3.6	□□□□□ -1.83
VAM10	YOR068C	MRH1	Q12117	320 aa	Predicted RBP	3.6	□□□□□ -1.83
VAM10	YOR068C	RRG1	Q12167	365 aa	Predicted RBP	3.6	□□□□□ -1.83
VAM10	YOR068C	NFI1	Q12216	726 aa		3.6	□□□□□ -1.83
VAM10	YOR068C	HSH49	Q99181	213 aa	Predicted RBP	3.6	□□□□□ -1.83
VAM10	YOR068C	LAM4	P38800	1345 aa		3.6	□□□□□ -1.83
VAM10	YOR068C	MTF2	P10849	440 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	SPO16	P17122	198 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	STE4	P18851	423 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	VPS33	P20795	691 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	UBC1	P21734	215 aa	Known RBP	3.59	□□□□□ -1.83
VAM10	YOR068C	GCD7	P32502	381 aa	Predicted RBP	3.59	□□□□□ -1.83
VAM10	YOR068C	RPN2	P32565	945 aa	Known RBP	3.59	□□□□□ -1.83
VAM10	YOR068C	MIC60	P36112	540 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	GMH1	P36125	273 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	APL3	P38065	1025 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	YBL028C	P38202	106 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	PIH1	P38768	344 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	CTM1	P38818	585 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	YJL193W	P39542	402 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	YEL025C	P39991	1188 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	ZIM17	P42844	174 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	JJJ1	P53863	590 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	RRN5	Q02983	363 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	VPS64	Q03944	604 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	CIA1	Q05583	330 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	CSR1	Q06705	408 aa	Known RBP	3.59	□□□□□ -1.83
VAM10	YOR068C	MLH2	Q07980	695 aa		3.59	□□□□□ -1.83
VAM10	YOR068C	KIN3	P22209	435 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	RIT1	P23796	513 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	DPH5	P32469	300 aa	Predicted RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	HIR2	P32480	875 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	SSE1	P32589	693 aa	Known RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	ORC2	P32833	620 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	FTH1	P38310	465 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	SLX1	P38324	304 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	STB5	P38699	743 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	SMC2	P38989	1170 aa	Known RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	MIT1	P40002	666 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	ALD5	P40047	520 aa	Known RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	YJL070C	P40361	888 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	RIC1	P40395	1056 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	SKP2	P42843	763 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	PMT6	P42934	759 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	GSM1	P42950	618 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	TRF5	P48561	642 aa	Known RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	NUP84	P52891	726 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	YIP4	P53093	235 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	RBG2	P53295	368 aa	Known RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	MEP3	P53390	489 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	ARC35	P53731	342 aa	Known RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	CBK1	P53894	756 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	RPS15	Q01855	142 aa	Known RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	MFM1	Q02783	413 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	YDR179W-A	Q03983	463 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	RRN11	Q04712	507 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	EIS1	Q05050	843 aa	Known RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	HOF1	Q05080	669 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	SDH5	Q08230	162 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	SLK19	Q08581	821 aa	Known RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	REX3	Q12090	404 aa		3.58	□□□□□ -1.84
VAM10	YOR068C	BRR1	Q99177	341 aa	Predicted RBP	3.58	□□□□□ -1.84
VAM10	YOR068C	TPK1	P06244	397 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	NCP1	P16603	691 aa	Known RBP	3.57	□□□□□ -1.84
VAM10	YOR068C	POL4	P25615	582 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	DSS4	P32601	143 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	MRP4	P32902	394 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	DHR2	P36009	735 aa	Predicted RBP	3.57	□□□□□ -1.84
VAM10	YOR068C	BYE1	P36106	594 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	EFM2	P38347	419 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	FSH1	P38777	243 aa	Known RBP	3.57	□□□□□ -1.84
VAM10	YOR068C	VPS45	P38932	577 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	EPL1	P43572	832 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	SPC98	P53540	846 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	MRPL19	P53875	158 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	VPS9	P54787	451 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	ACS1	Q01574	713 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	YPL108W	Q02872	168 aa	Predicted RBP	3.57	□□□□□ -1.84
VAM10	YOR068C	TRS23	Q03784	219 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	VID22	Q05934	901 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	TSR1	Q07381	788 aa	Known RBP	3.57	□□□□□ -1.84
VAM10	YOR068C	IRC10	Q08118	586 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	NBP2	Q12163	236 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	TAH18	Q12181	623 aa		3.57	□□□□□ -1.84
VAM10	YOR068C	SNF1	P06782	633 aa	Known RBP	3.56	□□□□□ -1.84
VAM10	YOR068C	ADE3	P07245	946 aa	Known RBP	3.56	□□□□□ -1.84
VAM10	YOR068C	OM45	P16547	393 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	BET2	P20133	325 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	TFB1	P32776	642 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	YMC2	P38087	329 aa		3.56	□□□□□ -1.84
VAM10	YOR068C	AIM10	P39965	576 aa	Known RBP	3.56	□□□□□ -1.84
VAM10	YOR068C	IDS2	P46958	469 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms