RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W YIL108WP40483 696 aaKnown RBP7.7□□□□□ -1.18
NUP53YMR153W SUN4P53616 420 aa7.7□□□□□ -1.18
NUP53YMR153W YAT1P80235 687 aa7.7□□□□□ -1.18
NUP53YMR153W YMR160WQ03823 816 aa7.7□□□□□ -1.18
NUP53YMR153W QCR6P00127 147 aa7.69□□□□□ -1.18
NUP53YMR153W SBP1P10080 294 aaKnown RBP7.69□□□□□ -1.18
NUP53YMR153W UBA1P22515 1024 aaKnown RBP7.69□□□□□ -1.18
NUP53YMR153W YSP3P25036 478 aa7.69□□□□□ -1.18
NUP53YMR153W KES1P35844 434 aaKnown RBP7.69□□□□□ -1.18
NUP53YMR153W MSG5P38590 489 aa7.69□□□□□ -1.18
NUP53YMR153W SET2P46995 733 aaKnown RBP7.69□□□□□ -1.18
NUP53YMR153W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
NUP53YMR153W COG1P53079 417 aa7.69□□□□□ -1.18
NUP53YMR153W RIM8P53179 542 aa7.69□□□□□ -1.18
NUP53YMR153W EFM6P53970 246 aa7.69□□□□□ -1.18
NUP53YMR153W MET14Q02196 202 aa7.69□□□□□ -1.18
NUP53YMR153W NUP100Q02629 959 aa7.69□□□□□ -1.18
NUP53YMR153W YDR131CQ03899 556 aa7.69□□□□□ -1.18
NUP53YMR153W YDR444WQ04093 687 aa7.69□□□□□ -1.18
NUP53YMR153W ARG7Q04728 441 aa7.69□□□□□ -1.18
NUP53YMR153W TGL5Q12043 749 aa7.69□□□□□ -1.18
NUP53YMR153W CDC24P11433 854 aaPredicted RBP7.69□□□□□ -1.18
NUP53YMR153W GAL11P19659 1081 aa7.69□□□□□ -1.18
NUP53YMR153W SNT1P25357 1226 aa7.69□□□□□ -1.18
NUP53YMR153W PAP1P29468 568 aaKnown RBP7.69□□□□□ -1.18
NUP53YMR153W HEM12P32347 362 aaPredicted RBP7.69□□□□□ -1.18
NUP53YMR153W CTF13P35203 478 aa7.69□□□□□ -1.18
NUP53YMR153W PBP2P38151 413 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
NUP53YMR153W STN1P38960 494 aa7.69□□□□□ -1.18
NUP53YMR153W SUM1P46676 1062 aa7.69□□□□□ -1.18
NUP53YMR153W CIS3P47001 227 aa7.69□□□□□ -1.18
NUP53YMR153W PCL10P53124 433 aa7.69□□□□□ -1.18
NUP53YMR153W CPR6P53691 371 aaKnown RBP7.69□□□□□ -1.18
NUP53YMR153W BOP3P53958 396 aa7.69□□□□□ -1.18
NUP53YMR153W MTG1Q03151 367 aaPredicted RBP7.69□□□□□ -1.18
NUP53YMR153W TDA9Q04545 1251 aa7.69□□□□□ -1.18
NUP53YMR153W YLL032CQ07834 825 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
NUP53YMR153W THI73Q07904 523 aa7.69□□□□□ -1.18
NUP53YMR153W SRO7Q12038 1033 aa7.69□□□□□ -1.18
NUP53YMR153W HOS1Q12214 470 aa7.69□□□□□ -1.18
NUP53YMR153W BRR2P32639 2163 aaKnown RBP7.68□□□□□ -1.18
NUP53YMR153W RPL1AP0CX43 217 aaKnown RBP7.68□□□□□ -1.18
NUP53YMR153W RPL1BP0CX44 217 aaKnown RBP7.68□□□□□ -1.18
NUP53YMR153W RED1P14291 827 aa7.68□□□□□ -1.18
NUP53YMR153W PUF4P25339 888 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
NUP53YMR153W PLC1P32383 869 aa7.68□□□□□ -1.18
NUP53YMR153W CNS1P33313 385 aa7.68□□□□□ -1.18
NUP53YMR153W SMF2P38778 549 aa7.68□□□□□ -1.18
NUP53YMR153W SCC4P40090 624 aa7.68□□□□□ -1.18
NUP53YMR153W YFR018CP43599 363 aa7.68□□□□□ -1.18
NUP53YMR153W YDR132CQ03900 495 aa7.68□□□□□ -1.18
NUP53YMR153W YML096WQ04489 525 aa7.68□□□□□ -1.18
NUP53YMR153W SML1Q04964 104 aa7.68□□□□□ -1.18
NUP53YMR153W CIA1Q05583 330 aa7.68□□□□□ -1.18
NUP53YMR153W ECI1Q05871 280 aa7.68□□□□□ -1.18
NUP53YMR153W ESC2Q06340 456 aa7.68□□□□□ -1.18
NUP53YMR153W MCP2Q06567 569 aa7.68□□□□□ -1.18
NUP53YMR153W MPC54Q08550 464 aa7.68□□□□□ -1.18
NUP53YMR153W RKM5Q12367 367 aa7.68□□□□□ -1.18
NUP53YMR153W YLR149CQ99296 730 aa7.68□□□□□ -1.18
NUP53YMR153W TEL1P38110 2787 aa7.68□□□□□ -1.18
NUP53YMR153W GCD6P32501 712 aaKnown RBP7.67□□□□□ -1.18
NUP53YMR153W IMP3P32899 183 aaPredicted RBP7.67□□□□□ -1.18
NUP53YMR153W UBP14P38237 781 aaKnown RBP7.67□□□□□ -1.18
NUP53YMR153W YBR238CP38330 731 aaKnown RBP7.67□□□□□ -1.18
NUP53YMR153W POP4P38336 279 aa7.67□□□□□ -1.18
NUP53YMR153W RPH1P39956 796 aa7.67□□□□□ -1.18
NUP53YMR153W IRR1P40541 1150 aa7.67□□□□□ -1.18
NUP53YMR153W FET5P43561 622 aa7.67□□□□□ -1.18
NUP53YMR153W CTK3P46963 296 aaPredicted RBP7.67□□□□□ -1.18
NUP53YMR153W YGL108CP53139 140 aa7.67□□□□□ -1.18
NUP53YMR153W YPR003CP53394 754 aa7.67□□□□□ -1.18
NUP53YMR153W FRE4P53746 719 aa7.67□□□□□ -1.18
NUP53YMR153W RPN9Q04062 393 aaKnown RBP7.67□□□□□ -1.18
NUP53YMR153W URH1Q04179 340 aa7.67□□□□□ -1.18
NUP53YMR153W EMI1Q04406 187 aa7.67□□□□□ -1.18
NUP53YMR153W BNA5Q05979 453 aa7.67□□□□□ -1.18
NUP53YMR153W TRM8Q12009 286 aa7.67□□□□□ -1.18
NUP53YMR153W AVL9Q12500 764 aa7.67□□□□□ -1.18
NUP53YMR153W FRT1Q99332 602 aa7.67□□□□□ -1.18
NUP53YMR153W YPR089WO13585 888 aa7.66□□□□□ -1.18
NUP53YMR153W ERR1P0CX10 437 aa7.66□□□□□ -1.18
NUP53YMR153W ERR2P0CX11 437 aa7.66□□□□□ -1.18
NUP53YMR153W APA1P16550 321 aaKnown RBP7.66□□□□□ -1.18
NUP53YMR153W EPT1P22140 391 aa7.66□□□□□ -1.18
NUP53YMR153W SPS19P32573 292 aaKnown RBP7.66□□□□□ -1.18
NUP53YMR153W PEX5P35056 612 aa7.66□□□□□ -1.18
NUP53YMR153W PHO11P35842 467 aa7.66□□□□□ -1.18
NUP53YMR153W VHC1P38329 1120 aa7.66□□□□□ -1.18
NUP53YMR153W PHO12P38693 467 aa7.66□□□□□ -1.18
NUP53YMR153W SMF1P38925 575 aa7.66□□□□□ -1.18
NUP53YMR153W TIM17P39515 158 aa7.66□□□□□ -1.18
NUP53YMR153W ELO1P39540 310 aa7.66□□□□□ -1.18
NUP53YMR153W NDC80P40460 691 aa7.66□□□□□ -1.18
NUP53YMR153W RPL34BP40525 121 aaKnown RBP7.66□□□□□ -1.18
NUP53YMR153W ERR3P42222 437 aa7.66□□□□□ -1.18
NUP53YMR153W ATG36P46983 293 aa7.66□□□□□ -1.18
NUP53YMR153W TGL2P54857 326 aa7.66□□□□□ -1.18
NUP53YMR153W TRS31Q03337 283 aa7.66□□□□□ -1.18
NUP53YMR153W ARX1Q03862 593 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms