RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W FAB1P34756 2278 aa1.35□□□□□ -2.19
PRP39YML046W MDN1Q12019 4910 aaKnown RBP1.34□□□□□ -2.19
PRP39YML046W GPA1P08539 472 aa1.34□□□□□ -2.19
PRP39YML046W YDL186WP48568 277 aa1.34□□□□□ -2.19
PRP39YML046W YRB30P53107 440 aaPredicted RBP1.34□□□□□ -2.19
PRP39YML046W POB3Q04636 552 aaKnown RBP1.34□□□□□ -2.19
PRP39YML046W NGL1Q08213 363 aaKnown RBP1.34□□□□□ -2.19
PRP39YML046W YKL091CP33324 310 aaKnown RBP1.33□□□□□ -2.2
PRP39YML046W YBP1P38315 674 aa1.33□□□□□ -2.2
PRP39YML046W BUD6P41697 788 aa1.33□□□□□ -2.2
PRP39YML046W ASK10P48361 1146 aa1.33□□□□□ -2.2
PRP39YML046W YMR178WQ03219 274 aaKnown RBP1.33□□□□□ -2.2
PRP39YML046W GDH1P07262 454 aaKnown RBP1.33□□□□□ -2.2
PRP39YML046W IAH1P41734 238 aa1.33□□□□□ -2.2
PRP39YML046W MCP2Q06567 569 aa1.33□□□□□ -2.2
PRP39YML046W SWC3P31376 625 aa1.32□□□□□ -2.2
PRP39YML046W MSN2P33748 704 aa1.32□□□□□ -2.2
PRP39YML046W GZF3P42944 551 aaKnown RBP1.32□□□□□ -2.2
PRP39YML046W CRF1Q04930 467 aa1.32□□□□□ -2.2
PRP39YML046W PAL1Q05518 499 aaKnown RBP1.32□□□□□ -2.2
PRP39YML046W PEA2P40091 420 aa1.31□□□□□ -2.2
PRP39YML046W DIM1P41819 318 aaKnown RBP1.31□□□□□ -2.2
PRP39YML046W NPA3P47122 385 aa1.31□□□□□ -2.2
PRP39YML046W NNF1P47149 201 aa1.31□□□□□ -2.2
PRP39YML046W YGL039WP53183 348 aaKnown RBP1.31□□□□□ -2.2
PRP39YML046W YDL012CQ12489 107 aa1.31□□□□□ -2.2
PRP39YML046W YOL098CQ12496 1037 aa1.31□□□□□ -2.2
PRP39YML046W URA3P03962 267 aa1.31□□□□□ -2.2
PRP39YML046W LAC1P28496 418 aa1.31□□□□□ -2.2
PRP39YML046W LOS1P33418 1100 aaPredicted RBP1.31□□□□□ -2.2
PRP39YML046W SRP68P38687 599 aaKnown RBP1.31□□□□□ -2.2
PRP39YML046W YJL068CP40363 299 aa1.31□□□□□ -2.2
PRP39YML046W RTS2P40962 232 aa1.31□□□□□ -2.2
PRP39YML046W RNR4P49723 345 aaKnown RBP1.31□□□□□ -2.2
PRP39YML046W MNT2P53059 558 aa1.31□□□□□ -2.2
PRP39YML046W HOS1Q12214 470 aa1.31□□□□□ -2.2
PRP39YML046W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
PRP39YML046W IRC20Q06554 1556 aa1.3□□□□□ -2.2
PRP39YML046W YER145C-AA0A023PYF4 145 aa1.3□□□□□ -2.2
PRP39YML046W PRP45P28004 379 aaPredicted RBP1.3□□□□□ -2.2
PRP39YML046W AGA1P32323 725 aa1.3□□□□□ -2.2
PRP39YML046W DID4P36108 232 aa1.3□□□□□ -2.2
PRP39YML046W YJL213WP40896 331 aa1.3□□□□□ -2.2
PRP39YML046W GSM1P42950 618 aa1.3□□□□□ -2.2
PRP39YML046W CTL1Q03220 320 aaKnown RBP1.3□□□□□ -2.2
PRP39YML046W EKI1Q03764 534 aa1.3□□□□□ -2.2
PRP39YML046W DNF1P32660 1571 aa1.29□□□□□ -2.2
PRP39YML046W MRS3P10566 314 aa1.29□□□□□ -2.2
PRP39YML046W PRE2P30656 287 aaKnown RBP1.29□□□□□ -2.2
PRP39YML046W PRS1P32895 427 aaKnown RBP1.29□□□□□ -2.2
PRP39YML046W MNN11P46985 422 aaKnown RBP1.29□□□□□ -2.2
PRP39YML046W DNM1P54861 757 aa1.29□□□□□ -2.2
PRP39YML046W MRP2P10663 115 aaPredicted RBP1.29□□□□□ -2.2
PRP39YML046W PDE1P22434 369 aa1.29□□□□□ -2.2
PRP39YML046W IRC5P43610 853 aa1.29□□□□□ -2.2
PRP39YML046W SDT1P53078 280 aa1.29□□□□□ -2.2
PRP39YML046W HEL2Q05580 639 aaKnown RBP1.29□□□□□ -2.2
PRP39YML046W TMC1Q08422 150 aaPredicted RBP1.29□□□□□ -2.2
PRP39YML046W YGL081WP53156 320 aa1.28□□□□□ -2.2
PRP39YML046W IGO1P53897 168 aa1.28□□□□□ -2.2
PRP39YML046W RNY1Q02933 434 aaKnown RBP1.28□□□□□ -2.2
PRP39YML046W YOR378WQ08902 515 aa1.28□□□□□ -2.2
PRP39YML046W YLR049CQ12110 428 aa1.28□□□□□ -2.2
PRP39YML046W ATP12P22135 325 aa1.27□□□□□ -2.21
PRP39YML046W FET5P43561 622 aa1.27□□□□□ -2.21
PRP39YML046W YLR455WQ06188 304 aa1.27□□□□□ -2.21
PRP39YML046W SUI3P09064 285 aaKnown RBP1.26□□□□□ -2.21
PRP39YML046W PET309P32522 965 aaPredicted RBP1.26□□□□□ -2.21
PRP39YML046W TYS1P36421 394 aaKnown RBP1.26□□□□□ -2.21
PRP39YML046W YTM1Q12024 460 aaPredicted RBP1.26□□□□□ -2.21
PRP39YML046W COX1P00401 534 aa1.26□□□□□ -2.21
PRP39YML046W FUN12P39730 1002 aaKnown RBP1.26□□□□□ -2.21
PRP39YML046W UBX6P47049 396 aa1.26□□□□□ -2.21
PRP39YML046W TIS11P47977 285 aa1.26□□□□□ -2.21
PRP39YML046W SGF73P53165 657 aa1.26□□□□□ -2.21
PRP39YML046W ARP10Q04549 284 aa1.26□□□□□ -2.21
PRP39YML046W YOL159CQ08300 171 aa1.26□□□□□ -2.21
PRP39YML046W YBR255C-AQ3E776 120 aa1.26□□□□□ -2.21
PRP39YML046W MIC60P36112 540 aa1.25□□□□□ -2.21
PRP39YML046W SEC31P38968 1273 aaKnown RBP1.25□□□□□ -2.21
PRP39YML046W ARB1P40024 610 aaKnown RBP1.25□□□□□ -2.21
PRP39YML046W OSW7P43611 510 aa1.25□□□□□ -2.21
PRP39YML046W ASI1P54074 624 aa1.25□□□□□ -2.21
PRP39YML046W MTQ2Q03920 221 aaPredicted RBP1.25□□□□□ -2.21
PRP39YML046W MHR1Q06630 226 aa1.25□□□□□ -2.21
PRP39YML046W RPL15AP05748 204 aaKnown RBP1.24□□□□□ -2.21
PRP39YML046W CTT1P06115 562 aa1.24□□□□□ -2.21
PRP39YML046W PPG1P32838 368 aa1.24□□□□□ -2.21
PRP39YML046W YEN1P40028 759 aa1.24□□□□□ -2.21
PRP39YML046W VFA1P40080 203 aa1.24□□□□□ -2.21
PRP39YML046W TRS31Q03337 283 aa1.24□□□□□ -2.21
PRP39YML046W TMA64Q04600 565 aaKnown RBP1.24□□□□□ -2.21
PRP39YML046W EDE1P34216 1381 aa1.24□□□□□ -2.21
PRP39YML046W POL3P15436 1097 aa1.24□□□□□ -2.21
PRP39YML046W MCK1P21965 375 aaKnown RBP1.24□□□□□ -2.21
PRP39YML046W SPR1P32603 445 aa1.24□□□□□ -2.21
PRP39YML046W TIF5P38431 405 aaKnown RBP1.24□□□□□ -2.21
PRP39YML046W RPH1P39956 796 aa1.24□□□□□ -2.21
PRP39YML046W HLJ1P48353 224 aa1.24□□□□□ -2.21
PRP39YML046W YNR071CP53757 342 aa1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms