RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	ESA1	Q08649	445 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	RSA1	Q08932	381 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	ARP6	Q12509	438 aa		5.08	□□□□□ -1.6
SEC39	YLR440C	AAC3	P18238	307 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	COX11	P19516	300 aa	Known RBP	5.07	□□□□□ -1.6
SEC39	YLR440C	SUA5	P32579	426 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	MAE1	P36013	669 aa	Known RBP	5.07	□□□□□ -1.6
SEC39	YLR440C	HEL1	P36113	551 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	SDH8	P38345	138 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	SNL1	P40548	159 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	YIL001W	P40560	513 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	IRC24	P40580	263 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	HXT8	P40886	569 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	SSU72	P53538	206 aa	Predicted RBP	5.07	□□□□□ -1.6
SEC39	YLR440C	YKR005C	Q02203	525 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	COX20	Q04935	205 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	MRX10	Q05648	414 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	DCR2	Q05924	578 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	SPO77	Q06134	477 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	CTI6	Q08923	506 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	OSW2	Q12202	724 aa		5.07	□□□□□ -1.6
SEC39	YLR440C	PDH1	Q12428	516 aa	Known RBP	5.07	□□□□□ -1.6
SEC39	YLR440C	PFK27	Q12471	397 aa	Predicted RBP	5.07	□□□□□ -1.6
SEC39	YLR440C	COX6	P00427	148 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	TYR1	P20049	452 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	VPS34	P22543	875 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	SEC1	P30619	724 aa	Known RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	NGG1	P32494	702 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
SEC39	YLR440C	AMN1	P38285	549 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	YDR089W	P38966	869 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	CCT5	P40413	562 aa	Known RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	HPM1	P40481	377 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	HIS6	P40545	261 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	ELP2	P42935	788 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	MPS3	P47069	682 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	GTO1	P48239	356 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	YGR042W	P53227	271 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	RCF2	P53721	224 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	PDS5	Q04264	1277 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	GYL1	Q04322	720 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	FAR8	Q05040	523 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	YPL216W	Q08964	1102 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	PUS9	Q12069	462 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	PSY3	Q12318	242 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	BBP1	Q12365	385 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	PGA3	Q12746	312 aa	Known RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	MDM12	Q92328	271 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	MTR10	Q99189	972 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	GAL7	P08431	366 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	KGD1	P20967	1014 aa	Known RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	CMK2	P22517	447 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	STE50	P25344	346 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	BUD23	P25627	275 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	SEC61	P32915	480 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	MUD2	P36084	527 aa	Known RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	AKL1	P38080	1108 aa	Known RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	RTR1	P40084	226 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	ATF1	P40353	525 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	YIL089W	P40500	205 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
SEC39	YLR440C	NET1	P47035	1189 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	CWC25	P53854	179 aa	Known RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	SMA1	Q02651	245 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	ECM23	Q02710	187 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	YMR155W	Q03795	547 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	HFD1	Q04458	532 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	GTO3	Q04806	366 aa		5.06	□□□□□ -1.6
SEC39	YLR440C	LEU9	Q12166	604 aa	Known RBP	5.06	□□□□□ -1.6
SEC39	YLR440C	RAD7	P06779	565 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	GPA1	P08539	472 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	KIN2	P13186	1147 aa	Known RBP	5.05	□□□□□ -1.6
SEC39	YLR440C	GEX1	P25596	615 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	PHO91	P27514	894 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	GPI10	P30777	616 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	ATO2	P32907	282 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	CDC27	P38042	758 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	HMT1	P38074	348 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	YHL017W	P38745	532 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	PEX28	P38848	579 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	LIN1	P38852	340 aa	Predicted RBP	5.05	□□□□□ -1.6
SEC39	YLR440C	CCC2	P38995	1004 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	PIK1	P39104	1066 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	TGL3	P40308	642 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	IMA5	P40884	581 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	LCB2	P40970	561 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	RMD8	P43620	662 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	TYW3	P53177	273 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	YGR111W	P53265	400 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	ORC4	P54791	529 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	TIM10	P87108	93 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	SWP1	Q02795	286 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	FCP1	Q03254	732 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	RMT2	Q03305	412 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	HER2	Q03557	464 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	RAD30	Q04049	632 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	UNG1	P12887	359 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	KTR1	P27810	393 aa	Known RBP	5.05	□□□□□ -1.6
SEC39	YLR440C	GDA1	P32621	518 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	COT1	P32798	439 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms