RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	YHL008C	P38750	627 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	AIM46	P38885	310 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	CCT2	P39076	527 aa	Known RBP	4.65	□□□□□ -1.66
CBF5	YLR175W	ATM1	P40416	690 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	YIL161W	P40449	235 aa	Known RBP	4.65	□□□□□ -1.66
CBF5	YLR175W	DPH1	P40487	425 aa	Known RBP	4.65	□□□□□ -1.66
CBF5	YLR175W	OYE3	P41816	400 aa	Predicted RBP	4.65	□□□□□ -1.66
CBF5	YLR175W	ERR3	P42222	437 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	URB2	P47108	1174 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	TAH11	P47112	604 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
CBF5	YLR175W	UBP2	Q01476	1272 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	YPL014W	Q02606	381 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	LEE1	Q02799	301 aa	Known RBP	4.65	□□□□□ -1.66
CBF5	YLR175W	INA17	Q02888	182 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	RTN1	Q04947	295 aa	Known RBP	4.65	□□□□□ -1.66
CBF5	YLR175W	YCS4	Q06156	1176 aa		4.65	□□□□□ -1.66
CBF5	YLR175W	RUD3	Q12234	484 aa	Known RBP	4.65	□□□□□ -1.66
CBF5	YLR175W	FLP1	P03870	423 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	ARG4	P04076	463 aa	Predicted RBP	4.64	□□□□□ -1.67
CBF5	YLR175W	ILV2	P07342	687 aa	Known RBP	4.64	□□□□□ -1.67
CBF5	YLR175W	AAT2	P23542	418 aa	Known RBP	4.64	□□□□□ -1.67
CBF5	YLR175W	CDC20	P26309	610 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	MET22	P32179	357 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	HEM12	P32347	362 aa	Predicted RBP	4.64	□□□□□ -1.67
CBF5	YLR175W	SMI1	P32566	505 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	KES1	P35844	434 aa	Known RBP	4.64	□□□□□ -1.67
CBF5	YLR175W	YHL041W	P38730	149 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	ELO3	P40319	345 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	BST1	P43571	1029 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	ATG36	P46983	293 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	PRP24	P49960	444 aa	Known RBP	4.64	□□□□□ -1.67
CBF5	YLR175W	COQ6	P53318	479 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	TOF2	Q02208	771 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	USA1	Q03714	838 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	NSE5	Q03718	556 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	YLR346C	Q06139	101 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	SWC7	Q06707	132 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	YOR223W	Q12015	292 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	AFI1	Q99222	893 aa		4.64	□□□□□ -1.67
CBF5	YLR175W	RPB2	P08518	1224 aa	Known RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	GPA2	P10823	449 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	HSP60	P19882	572 aa	Known RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	CLN2	P20438	545 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	GID7	P25569	745 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	YCR051W	P25631	222 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	MSH1	P25846	959 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	KAR9	P32526	644 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	OAF3	P36023	863 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	ADD66	P36040	267 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	KTR4	P38131	464 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	URA8	P38627	578 aa	Predicted RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	SMF2	P38778	549 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	SPC97	P38863	823 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	RAD26	P40352	1085 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	YIL165C	P40446	119 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	IST3	P40565	148 aa	Predicted RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	CNN1	P43618	361 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	ROK1	P45818	564 aa	Predicted RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	NNF1	P47149	201 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	ZIP2	P53061	704 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	TAN1	P53072	289 aa	Predicted RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	TRM112	P53738	135 aa	Predicted RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	RLI1	Q03195	608 aa	Known RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	ADI1	Q03677	179 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	ARP9	Q05123	467 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	ADE13	Q05911	482 aa	Known RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	SFH1	Q06168	426 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	EMG1	Q06287	252 aa	Known RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	TDA5	Q06417	326 aa	Known RBP	4.63	□□□□□ -1.67
CBF5	YLR175W	OMS1	Q06668	471 aa		4.63	□□□□□ -1.67
CBF5	YLR175W	COX5A	P00424	153 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	REV1	P12689	985 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	URA10	P30402	227 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	TYE7	P33122	291 aa	Predicted RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	PEX5	P35056	612 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	APM3	P38153	483 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	SRP68	P38687	599 aa	Known RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	GGA2	P38817	585 aa	Known RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	REV7	P38927	245 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	EXO1	P39875	702 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	SAP1	P39955	897 aa	Known RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	MRPS18	P42847	217 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	BUD13	P46947	266 aa	Predicted RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	STR3	P53101	465 aa	Known RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	GND2	P53319	492 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	SIW14	P53965	281 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	KTR5	P53966	522 aa	Predicted RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	YVH1	Q02256	364 aa	Known RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	YMR206W	Q03695	313 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	YMR160W	Q03823	816 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	SEG1	Q04279	960 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	DAL4	Q04895	635 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	CLP1	Q08685	445 aa	Predicted RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	YOR387C	Q08910	206 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	PGC1	Q08959	321 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	OCA6	Q12454	224 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	YDR034W-B	Q6Q5X2	51 aa		4.62	□□□□□ -1.67
CBF5	YLR175W	RPP1A	P05318	106 aa	Predicted RBP	4.62	□□□□□ -1.67
CBF5	YLR175W	INO1	P11986	533 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms