RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C YDL183CP48569 320 aa5.53□□□□□ -1.52
VPS1YKR001C PAN2P53010 1115 aaPredicted RBP5.53□□□□□ -1.52
VPS1YKR001C YGR012WP53206 393 aa5.53□□□□□ -1.52
VPS1YKR001C CWC25P53854 179 aaKnown RBP5.53□□□□□ -1.52
VPS1YKR001C MRPS17Q03246 237 aaPredicted RBP5.53□□□□□ -1.52
VPS1YKR001C CLU1Q03690 1277 aaKnown RBP5.53□□□□□ -1.52
VPS1YKR001C RSM24Q03976 319 aa5.53□□□□□ -1.52
VPS1YKR001C YML082WQ04533 649 aaKnown RBP5.53□□□□□ -1.52
VPS1YKR001C SPR28Q04921 423 aa5.53□□□□□ -1.52
VPS1YKR001C ECM38Q05902 660 aaPredicted RBP5.53□□□□□ -1.52
VPS1YKR001C RGA2Q06407 1009 aa5.53□□□□□ -1.52
VPS1YKR001C OMS1Q06668 471 aa5.53□□□□□ -1.52
VPS1YKR001C VAC14Q06708 880 aa5.53□□□□□ -1.52
VPS1YKR001C PUS7Q08647 676 aaKnown RBP5.53□□□□□ -1.52
VPS1YKR001C TIP41Q12199 356 aa5.53□□□□□ -1.52
VPS1YKR001C HMS1Q12398 434 aa5.53□□□□□ -1.52
VPS1YKR001C ARP7Q12406 477 aa5.53□□□□□ -1.52
VPS1YKR001C TDH1P00360 332 aaKnown RBP5.53□□□□□ -1.52
VPS1YKR001C CBP2P03874 630 aaPredicted RBP5.53□□□□□ -1.52
VPS1YKR001C GPA2P10823 449 aa5.53□□□□□ -1.52
VPS1YKR001C SST2P11972 698 aaKnown RBP5.53□□□□□ -1.52
VPS1YKR001C DPB2P24482 689 aaPredicted RBP5.53□□□□□ -1.52
VPS1YKR001C CRM1P30822 1084 aaKnown RBP5.53□□□□□ -1.52
VPS1YKR001C SIN4P32259 974 aa5.53□□□□□ -1.52
VPS1YKR001C MSN4P33749 630 aa5.53□□□□□ -1.52
VPS1YKR001C MRPL37P36532 105 aa5.53□□□□□ -1.52
VPS1YKR001C NDT80P38830 627 aa5.53□□□□□ -1.52
VPS1YKR001C ALG5P40350 334 aa5.53□□□□□ -1.52
VPS1YKR001C SNL1P40548 159 aa5.53□□□□□ -1.52
VPS1YKR001C CIN5P40917 295 aa5.53□□□□□ -1.52
VPS1YKR001C YJR098CP47139 656 aa5.53□□□□□ -1.52
VPS1YKR001C CTR1P49573 406 aa5.53□□□□□ -1.52
VPS1YKR001C ASE1P50275 885 aa5.53□□□□□ -1.52
VPS1YKR001C MRPS35P53292 345 aa5.53□□□□□ -1.52
VPS1YKR001C RPN8Q08723 338 aaKnown RBP5.53□□□□□ -1.52
VPS1YKR001C MSH5Q12175 901 aa5.53□□□□□ -1.52
VPS1YKR001C OSW2Q12202 724 aa5.53□□□□□ -1.52
VPS1YKR001C FUR1P18562 216 aaKnown RBP5.52□□□□□ -1.53
VPS1YKR001C HXT3P32466 567 aaKnown RBP5.52□□□□□ -1.53
VPS1YKR001C SMC1P32908 1225 aa5.52□□□□□ -1.53
VPS1YKR001C MDJ1P35191 511 aa5.52□□□□□ -1.53
VPS1YKR001C DHR2P36009 735 aaPredicted RBP5.52□□□□□ -1.53
VPS1YKR001C MMS4P38257 691 aa5.52□□□□□ -1.53
VPS1YKR001C IRC24P40580 263 aa5.52□□□□□ -1.53
VPS1YKR001C YGL176CP46945 554 aa5.52□□□□□ -1.53
VPS1YKR001C LIA1P47120 325 aaKnown RBP5.52□□□□□ -1.53
VPS1YKR001C ART5P53244 586 aaKnown RBP5.52□□□□□ -1.53
VPS1YKR001C UTP8P53276 713 aaKnown RBP5.52□□□□□ -1.53
VPS1YKR001C CBK1P53894 756 aa5.52□□□□□ -1.53
VPS1YKR001C RPT6Q01939 405 aaKnown RBP5.52□□□□□ -1.53
VPS1YKR001C DIN7Q12086 430 aa5.52□□□□□ -1.53
VPS1YKR001C SKM1Q12469 655 aa5.52□□□□□ -1.53
VPS1YKR001C PRP2P20095 876 aaPredicted RBP5.51□□□□□ -1.53
VPS1YKR001C RAD57P25301 460 aa5.51□□□□□ -1.53
VPS1YKR001C BUD23P25627 275 aaPredicted RBP5.51□□□□□ -1.53
VPS1YKR001C KTR1P27810 393 aaKnown RBP5.51□□□□□ -1.53
VPS1YKR001C FUN30P31380 1131 aa5.51□□□□□ -1.53
VPS1YKR001C RMA1P36001 430 aaKnown RBP5.51□□□□□ -1.53
VPS1YKR001C RIM4P38741 713 aa5.51□□□□□ -1.53
VPS1YKR001C ERP5P38819 212 aa5.51□□□□□ -1.53
VPS1YKR001C YIL001WP40560 513 aa5.51□□□□□ -1.53
VPS1YKR001C CCT8P47079 568 aaKnown RBP5.51□□□□□ -1.53
VPS1YKR001C IMD3P50095 523 aaKnown RBP5.51□□□□□ -1.53
VPS1YKR001C REC102Q02721 264 aa5.51□□□□□ -1.53
VPS1YKR001C RLI1Q03195 608 aaKnown RBP5.51□□□□□ -1.53
VPS1YKR001C PSR2Q07949 397 aa5.51□□□□□ -1.53
VPS1YKR001C DDC1Q08949 612 aa5.51□□□□□ -1.53
VPS1YKR001C ARG80P07249 177 aa5.51□□□□□ -1.53
VPS1YKR001C KIN82P25341 720 aa5.51□□□□□ -1.53
VPS1YKR001C YCR101CP25607 182 aa5.51□□□□□ -1.53
VPS1YKR001C UGA4P32837 571 aa5.51□□□□□ -1.53
VPS1YKR001C STB5P38699 743 aa5.51□□□□□ -1.53
VPS1YKR001C GND1P38720 489 aaKnown RBP5.51□□□□□ -1.53
VPS1YKR001C MTG2P38860 518 aa5.51□□□□□ -1.53
VPS1YKR001C GUP1P53154 560 aa5.51□□□□□ -1.53
VPS1YKR001C TOF2Q02208 771 aa5.51□□□□□ -1.53
VPS1YKR001C MUK1Q02866 612 aa5.51□□□□□ -1.53
VPS1YKR001C PPM1Q04081 328 aa5.51□□□□□ -1.53
VPS1YKR001C COA4Q05809 96 aa5.51□□□□□ -1.53
VPS1YKR001C KAP95Q06142 861 aaKnown RBP5.51□□□□□ -1.53
VPS1YKR001C MNL2Q12205 849 aa5.51□□□□□ -1.53
VPS1YKR001C PMR1P13586 950 aa5.5□□□□□ -1.53
VPS1YKR001C YAK1P14680 807 aa5.5□□□□□ -1.53
VPS1YKR001C UTR1P21373 530 aa5.5□□□□□ -1.53
VPS1YKR001C DBP2P24783 546 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C PUP1P25043 261 aa5.5□□□□□ -1.53
VPS1YKR001C PAT1P25644 796 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C CBF2P32504 956 aa5.5□□□□□ -1.53
VPS1YKR001C SQT1P35184 431 aa5.5□□□□□ -1.53
VPS1YKR001C VPS21P36017 210 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C OSH7P38755 437 aa5.5□□□□□ -1.53
VPS1YKR001C LNP1P38878 278 aa5.5□□□□□ -1.53
VPS1YKR001C CCC2P38995 1004 aa5.5□□□□□ -1.53
VPS1YKR001C HPM1P40481 377 aa5.5□□□□□ -1.53
VPS1YKR001C OPT1P40897 799 aa5.5□□□□□ -1.53
VPS1YKR001C UPF3P48412 387 aaKnown RBP5.5□□□□□ -1.53
VPS1YKR001C RMR1P53060 241 aa5.5□□□□□ -1.53
VPS1YKR001C LCL3P53153 274 aa5.5□□□□□ -1.53
VPS1YKR001C KTR6P54070 446 aa5.5□□□□□ -1.53
VPS1YKR001C YDR514CQ04408 483 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms