RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeast

Gene SEC28, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC28	YIL076W	TES1	P41903	349 aa	Known RBP	4.58	□□□□□ -1.68
SEC28	YIL076W	MAF1	P41910	395 aa		4.58	□□□□□ -1.68
SEC28	YIL076W	SKP2	P42843	763 aa		4.58	□□□□□ -1.68
SEC28	YIL076W	VPS25	P47142	202 aa		4.58	□□□□□ -1.68
SEC28	YIL076W	MSY1	P48527	492 aa		4.58	□□□□□ -1.68
SEC28	YIL076W	CPR6	P53691	371 aa	Known RBP	4.58	□□□□□ -1.68
SEC28	YIL076W	EAF7	P53911	425 aa	Known RBP	4.58	□□□□□ -1.68
SEC28	YIL076W	ADE16	P54113	591 aa	Known RBP	4.58	□□□□□ -1.68
SEC28	YIL076W	MTG1	Q03151	367 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC28	YIL076W	STP3	Q05937	343 aa		4.58	□□□□□ -1.68
SEC28	YIL076W	PIG1	Q06216	648 aa		4.58	□□□□□ -1.68
SEC28	YIL076W	MLC2	Q06580	163 aa		4.58	□□□□□ -1.68
SEC28	YIL076W	GAL1	P04385	528 aa		4.57	□□□□□ -1.68
SEC28	YIL076W	SUI3	P09064	285 aa	Known RBP	4.57	□□□□□ -1.68
SEC28	YIL076W	YCR006C	P25350	157 aa		4.57	□□□□□ -1.68
SEC28	YIL076W	HIS6	P40545	261 aa		4.57	□□□□□ -1.68
SEC28	YIL076W	IMA1	P53051	589 aa		4.57	□□□□□ -1.68
SEC28	YIL076W	GPA1	P08539	472 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	MSS18	P08593	268 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	MIS1	P09440	975 aa	Known RBP	4.56	□□□□□ -1.68
SEC28	YIL076W	YFL068W	P0CX99	160 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	YLL066W-A	P0CY00	160 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	YLL067W-A	P0CY01	160 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	PCT1	P13259	424 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	RFA2	P26754	273 aa	Known RBP	4.56	□□□□□ -1.68
SEC28	YIL076W	GCD7	P32502	381 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC28	YIL076W	YAT2	P40017	923 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	PHM8	P40025	321 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	YIL169C	P40442	995 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	ZAP1	P47043	880 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	BAG7	Q12128	409 aa		4.56	□□□□□ -1.68
SEC28	YIL076W	BIK1	P11709	440 aa		4.55	□□□□□ -1.68
SEC28	YIL076W	GRX7	P38068	203 aa		4.55	□□□□□ -1.68
SEC28	YIL076W	MET30	P39014	640 aa		4.55	□□□□□ -1.68
SEC28	YIL076W	DJP1	P40564	432 aa		4.55	□□□□□ -1.68
SEC28	YIL076W	UBP8	P50102	471 aa		4.55	□□□□□ -1.68
SEC28	YIL076W	CAC2	Q04199	468 aa		4.55	□□□□□ -1.68
SEC28	YIL076W	NDD1	Q08887	554 aa		4.55	□□□□□ -1.68
SEC28	YIL076W	FRE3	Q08905	711 aa		4.55	□□□□□ -1.68
SEC28	YIL076W	YLR112W	Q12130	139 aa		4.55	□□□□□ -1.68
SEC28	YIL076W	YER145C-A	A0A023PYF4	145 aa		4.54	□□□□□ -1.68
SEC28	YIL076W	RGT1	P32862	1170 aa		4.54	□□□□□ -1.68
SEC28	YIL076W	TOM20	P35180	183 aa		4.54	□□□□□ -1.68
SEC28	YIL076W	YBR138C	P38277	524 aa		4.54	□□□□□ -1.68
SEC28	YIL076W	FSH1	P38777	243 aa	Known RBP	4.54	□□□□□ -1.68
SEC28	YIL076W	DIG1	Q03063	452 aa	Known RBP	4.54	□□□□□ -1.68
SEC28	YIL076W	IZH1	Q03419	316 aa		4.54	□□□□□ -1.68
SEC28	YIL076W	SWF1	Q04629	336 aa		4.54	□□□□□ -1.68
SEC28	YIL076W	YML003W	P0CF16	290 aa		4.53	□□□□□ -1.68
SEC28	YIL076W	MRP2	P10663	115 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC28	YIL076W	YSP3	P25036	478 aa		4.53	□□□□□ -1.68
SEC28	YIL076W	LRE1	P25579	583 aa	Known RBP	4.53	□□□□□ -1.68
SEC28	YIL076W	MSH1	P25846	959 aa		4.53	□□□□□ -1.68
SEC28	YIL076W	PTP2	P29461	750 aa		4.53	□□□□□ -1.68
SEC28	YIL076W	MNN2	P38069	597 aa		4.53	□□□□□ -1.68
SEC28	YIL076W	ASG1	P40467	964 aa		4.53	□□□□□ -1.68
SEC28	YIL076W	ERR3	P42222	437 aa		4.53	□□□□□ -1.68
SEC28	YIL076W	ATG23	Q06671	453 aa		4.53	□□□□□ -1.68
SEC28	YIL076W	PCL6	P40038	420 aa		4.52	□□□□□ -1.69
SEC28	YIL076W	VPS27	P40343	622 aa	Known RBP	4.52	□□□□□ -1.69
SEC28	YIL076W	ECM16	Q04217	1267 aa	Known RBP	4.52	□□□□□ -1.69
SEC28	YIL076W	GRS2	Q06817	618 aa		4.52	□□□□□ -1.69
SEC28	YIL076W	PUG1	P40100	303 aa		4.51	□□□□□ -1.69
SEC28	YIL076W	BET4	Q00618	327 aa		4.51	□□□□□ -1.69
SEC28	YIL076W	YLR455W	Q06188	304 aa		4.51	□□□□□ -1.69
SEC28	YIL076W	POS5	Q06892	414 aa		4.51	□□□□□ -1.69
SEC28	YIL076W	YLR049C	Q12110	428 aa		4.51	□□□□□ -1.69
SEC28	YIL076W	ADE17	P38009	592 aa	Known RBP	4.5	□□□□□ -1.69
SEC28	YIL076W	TRS130	Q03660	1102 aa		4.5	□□□□□ -1.69
SEC28	YIL076W	ARP9	Q05123	467 aa		4.5	□□□□□ -1.69
SEC28	YIL076W	SWA2	Q06677	668 aa		4.5	□□□□□ -1.69
SEC28	YIL076W	NRT1	Q08485	598 aa		4.5	□□□□□ -1.69
SEC28	YIL076W	CLB4	P24871	460 aa		4.49	□□□□□ -1.69
SEC28	YIL076W	UBP13	P38187	747 aa		4.49	□□□□□ -1.69
SEC28	YIL076W	EXO84	P38261	753 aa		4.49	□□□□□ -1.69
SEC28	YIL076W	SAD1	P43589	448 aa		4.49	□□□□□ -1.69
SEC28	YIL076W	VAM6	Q07468	1049 aa		4.49	□□□□□ -1.69
SEC28	YIL076W	SWT1	Q12104	458 aa		4.49	□□□□□ -1.69
SEC28	YIL076W	YHL041W	P38730	149 aa		4.48	□□□□□ -1.69
SEC28	YIL076W	YIL161W	P40449	235 aa	Known RBP	4.48	□□□□□ -1.69
SEC28	YIL076W	DCP2	P53550	970 aa	Known RBP	4.48	□□□□□ -1.69
SEC28	YIL076W	ESBP6	P53918	673 aa		4.48	□□□□□ -1.69
SEC28	YIL076W	ECI1	Q05871	280 aa		4.48	□□□□□ -1.69
SEC28	YIL076W	ATP4	P05626	244 aa		4.47	□□□□□ -1.69
SEC28	YIL076W	YEF3	P16521	1044 aa	Known RBP	4.47	□□□□□ -1.69
SEC28	YIL076W	GEX2	P36173	615 aa		4.47	□□□□□ -1.69
SEC28	YIL076W	CCT4	P39078	528 aa	Known RBP	4.47	□□□□□ -1.69
SEC28	YIL076W	YND1	P40009	630 aa		4.47	□□□□□ -1.69
SEC28	YIL076W	ASI1	P54074	624 aa		4.47	□□□□□ -1.69
SEC28	YIL076W	YOR111W	Q99210	232 aa		4.47	□□□□□ -1.69
SEC28	YIL076W	CBP1	P07252	654 aa		4.46	□□□□□ -1.7
SEC28	YIL076W	VRG4	P40107	337 aa		4.46	□□□□□ -1.7
SEC28	YIL076W	PFA5	Q03289	374 aa		4.46	□□□□□ -1.7
SEC28	YIL076W	YLR281C	Q05863	155 aa		4.46	□□□□□ -1.7
SEC28	YIL076W	GPN2	Q08726	347 aa	Predicted RBP	4.46	□□□□□ -1.7
SEC28	YIL076W	RRP6	Q12149	733 aa	Known RBP	4.46	□□□□□ -1.7
SEC28	YIL076W	NYV1	Q12255	253 aa		4.46	□□□□□ -1.7
SEC28	YIL076W	ATP2	P00830	511 aa	Known RBP	4.45	□□□□□ -1.7
SEC28	YIL076W	CHO1	P08456	276 aa		4.45	□□□□□ -1.7
SEC28	YIL076W	NCP1	P16603	691 aa	Known RBP	4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms