RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C MEI5P32489 222 aa2.26□□□□□ -2.05
UBR1YGR184C COY1P34237 679 aa2.26□□□□□ -2.05
UBR1YGR184C NTC20P38302 140 aaPredicted RBP2.26□□□□□ -2.05
UBR1YGR184C PEX7P39108 375 aa2.26□□□□□ -2.05
UBR1YGR184C ATF1P40353 525 aa2.26□□□□□ -2.05
UBR1YGR184C BAP3P41815 604 aa2.26□□□□□ -2.05
UBR1YGR184C MSE1P48525 536 aa2.26□□□□□ -2.05
UBR1YGR184C YGR250CP53316 781 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C RPN9Q04062 393 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C SOV1Q04748 898 aa2.26□□□□□ -2.05
UBR1YGR184C SKG3Q06315 1026 aa2.26□□□□□ -2.05
UBR1YGR184C YPS7Q06325 596 aa2.26□□□□□ -2.05
UBR1YGR184C GET3Q12154 354 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C TCB3Q03640 1545 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C ADE3P07245 946 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C PET18P25362 215 aa2.26□□□□□ -2.05
UBR1YGR184C CAP1P28495 268 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C TRK2P28584 889 aa2.26□□□□□ -2.05
UBR1YGR184C SRP101P32916 621 aa2.26□□□□□ -2.05
UBR1YGR184C OLA1P38219 394 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C ERC1P38767 581 aa2.26□□□□□ -2.05
UBR1YGR184C SFB3P38810 929 aa2.26□□□□□ -2.05
UBR1YGR184C BUD16P39988 312 aa2.26□□□□□ -2.05
UBR1YGR184C MAM1P40065 302 aa2.26□□□□□ -2.05
UBR1YGR184C HXT14P42833 540 aa2.26□□□□□ -2.05
UBR1YGR184C PFA3P42836 336 aa2.26□□□□□ -2.05
UBR1YGR184C ART5P53244 586 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C CTK1Q03957 528 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C YDR286CQ05530 114 aa2.26□□□□□ -2.05
UBR1YGR184C NOP12Q08208 459 aaKnown RBP2.26□□□□□ -2.05
UBR1YGR184C APC5Q08683 685 aa2.26□□□□□ -2.05
UBR1YGR184C COX17Q12287 69 aa2.26□□□□□ -2.05
UBR1YGR184C ATP2P00830 511 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C GCD2P12754 651 aaPredicted RBP2.25□□□□□ -2.05
UBR1YGR184C ABF1P14164 731 aa2.25□□□□□ -2.05
UBR1YGR184C VMA16P23968 213 aa2.25□□□□□ -2.05
UBR1YGR184C DSS4P32601 143 aa2.25□□□□□ -2.05
UBR1YGR184C AAP1P37898 856 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C MCX1P38323 520 aaPredicted RBP2.25□□□□□ -2.05
UBR1YGR184C YGR111WP53265 400 aa2.25□□□□□ -2.05
UBR1YGR184C RRP45Q05636 305 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C NDL1Q06568 189 aa2.25□□□□□ -2.05
UBR1YGR184C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
UBR1YGR184C YPL272CQ08984 517 aa2.25□□□□□ -2.05
UBR1YGR184C LAT1P12695 482 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C SNT1P25357 1226 aa2.25□□□□□ -2.05
UBR1YGR184C MCM4P30665 933 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C AFG1P32317 509 aa2.25□□□□□ -2.05
UBR1YGR184C SSE2P32590 693 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C LOT5P34234 306 aa2.25□□□□□ -2.05
UBR1YGR184C HCS1P34243 683 aa2.25□□□□□ -2.05
UBR1YGR184C STB6P36085 766 aa2.25□□□□□ -2.05
UBR1YGR184C YDR089WP38966 869 aa2.25□□□□□ -2.05
UBR1YGR184C SEC31P38968 1273 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C TIF4631P39935 952 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C PFK26P40433 827 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C YIR042CP40586 236 aa2.25□□□□□ -2.05
UBR1YGR184C VMA13P41807 478 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C RPT4P53549 437 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C DAK1P54838 584 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C USA1Q03714 838 aa2.25□□□□□ -2.05
UBR1YGR184C MUS81Q04149 632 aaPredicted RBP2.25□□□□□ -2.05
UBR1YGR184C RAD33Q04231 177 aa2.25□□□□□ -2.05
UBR1YGR184C BUD22Q04347 519 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C TRE1Q08919 783 aa2.25□□□□□ -2.05
UBR1YGR184C BMS1Q08965 1183 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C TFB5Q3E7C1 72 aaPredicted RBP2.25□□□□□ -2.05
UBR1YGR184C RPC40P07703 335 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C STE11P23561 717 aa2.25□□□□□ -2.05
UBR1YGR184C MNE1P24720 663 aa2.25□□□□□ -2.05
UBR1YGR184C SMI1P32566 505 aa2.25□□□□□ -2.05
UBR1YGR184C HEL1P36113 551 aa2.25□□□□□ -2.05
UBR1YGR184C RRM3P38766 723 aa2.25□□□□□ -2.05
UBR1YGR184C YHR054CP38780 354 aa2.25□□□□□ -2.05
UBR1YGR184C CCT6P39079 546 aa2.25□□□□□ -2.05
UBR1YGR184C ZAP1P47043 880 aa2.25□□□□□ -2.05
UBR1YGR184C LIA1P47120 325 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C TIM11P81449 96 aaPredicted RBP2.25□□□□□ -2.05
UBR1YGR184C AIM32Q04689 311 aa2.25□□□□□ -2.05
UBR1YGR184C THI22Q06490 572 aa2.25□□□□□ -2.05
UBR1YGR184C Q0142Q9ZZW4 58 aa2.25□□□□□ -2.05
UBR1YGR184C GPH1P06738 902 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C GEX2P36173 615 aa2.25□□□□□ -2.05
UBR1YGR184C UBP13P38187 747 aa2.25□□□□□ -2.05
UBR1YGR184C TOS1P38288 455 aa2.25□□□□□ -2.05
UBR1YGR184C OYE3P41816 400 aaPredicted RBP2.25□□□□□ -2.05
UBR1YGR184C TOF1P53840 1238 aa2.25□□□□□ -2.05
UBR1YGR184C EFM6P53970 246 aa2.25□□□□□ -2.05
UBR1YGR184C RRN5Q02983 363 aa2.25□□□□□ -2.05
UBR1YGR184C TPO1Q07824 586 aa2.25□□□□□ -2.05
UBR1YGR184C SPE3Q12074 293 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C ARG1P22768 420 aa2.25□□□□□ -2.05
UBR1YGR184C YBL028CP38202 106 aa2.25□□□□□ -2.05
UBR1YGR184C RPA34P47006 233 aaPredicted RBP2.25□□□□□ -2.05
UBR1YGR184C NOP9P47077 666 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C CUL3P53202 744 aa2.25□□□□□ -2.05
UBR1YGR184C INN1P53901 409 aa2.25□□□□□ -2.05
UBR1YGR184C DBP9Q06218 594 aaKnown RBP2.25□□□□□ -2.05
UBR1YGR184C XYL2Q07993 356 aa2.25□□□□□ -2.05
UBR1YGR184C SUL2Q12325 893 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 135.6 ms