RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W BIT2P38346 545 aa5.46□□□□□ -1.54
CDC43YGL155W UBX7P38349 436 aa5.46□□□□□ -1.54
CDC43YGL155W AVT2P39981 480 aa5.46□□□□□ -1.54
CDC43YGL155W FIR1P40020 876 aa5.46□□□□□ -1.54
CDC43YGL155W SET2P46995 733 aaKnown RBP5.46□□□□□ -1.54
CDC43YGL155W YJL132WP47014 750 aa5.46□□□□□ -1.54
CDC43YGL155W AZR1P50080 613 aa5.46□□□□□ -1.54
CDC43YGL155W NRD1P53617 575 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
CDC43YGL155W CUZ1P53899 274 aa5.46□□□□□ -1.54
CDC43YGL155W MUB1Q03162 620 aa5.46□□□□□ -1.54
CDC43YGL155W SKY1Q03656 742 aa5.46□□□□□ -1.54
CDC43YGL155W DOT1Q04089 582 aaKnown RBP5.46□□□□□ -1.54
CDC43YGL155W CDC123Q05791 360 aa5.46□□□□□ -1.54
CDC43YGL155W RSC2Q06488 889 aa5.46□□□□□ -1.54
CDC43YGL155W CTF3Q12748 733 aa5.46□□□□□ -1.54
CDC43YGL155W CAR1P00812 333 aaKnown RBP5.45□□□□□ -1.54
CDC43YGL155W TYR1P20049 452 aa5.45□□□□□ -1.54
CDC43YGL155W VPS3P23643 1011 aa5.45□□□□□ -1.54
CDC43YGL155W HXT3P32466 567 aaKnown RBP5.45□□□□□ -1.54
CDC43YGL155W DPH5P32469 300 aaPredicted RBP5.45□□□□□ -1.54
CDC43YGL155W RPT1P33299 467 aaKnown RBP5.45□□□□□ -1.54
CDC43YGL155W SHU2P38957 223 aa5.45□□□□□ -1.54
CDC43YGL155W PRM9P39551 298 aa5.45□□□□□ -1.54
CDC43YGL155W MXR1P40029 184 aa5.45□□□□□ -1.54
CDC43YGL155W YER186CP40101 306 aa5.45□□□□□ -1.54
CDC43YGL155W MAM33P40513 266 aa5.45□□□□□ -1.54
CDC43YGL155W IAH1P41734 238 aa5.45□□□□□ -1.54
CDC43YGL155W RRT5P43607 289 aa5.45□□□□□ -1.54
CDC43YGL155W ASG7P46993 209 aa5.45□□□□□ -1.54
CDC43YGL155W TAN1P53072 289 aaPredicted RBP5.45□□□□□ -1.54
CDC43YGL155W YGL108CP53139 140 aa5.45□□□□□ -1.54
CDC43YGL155W YGR127WP53275 312 aa5.45□□□□□ -1.54
CDC43YGL155W RLI1Q03195 608 aaKnown RBP5.45□□□□□ -1.54
CDC43YGL155W MSC2Q03455 724 aa5.45□□□□□ -1.54
CDC43YGL155W YMR209CQ03648 457 aa5.45□□□□□ -1.54
CDC43YGL155W YMR160WQ03823 816 aa5.45□□□□□ -1.54
CDC43YGL155W JIP5Q06214 492 aaPredicted RBP5.45□□□□□ -1.54
CDC43YGL155W ATG26Q06321 1198 aa5.45□□□□□ -1.54
CDC43YGL155W CDD1Q06549 142 aa5.45□□□□□ -1.54
CDC43YGL155W AAD4Q07747 329 aa5.45□□□□□ -1.54
CDC43YGL155W MET7Q08645 548 aa5.45□□□□□ -1.54
CDC43YGL155W TMA46Q12000 345 aaKnown RBP5.45□□□□□ -1.54
CDC43YGL155W YDR461C-AQ2V2P7 80 aa5.45□□□□□ -1.54
CDC43YGL155W COX4P04037 155 aa5.44□□□□□ -1.54
CDC43YGL155W RHO2P06781 192 aa5.44□□□□□ -1.54
CDC43YGL155W SEC63P14906 663 aa5.44□□□□□ -1.54
CDC43YGL155W ADE2P21264 571 aaKnown RBP5.44□□□□□ -1.54
CDC43YGL155W SSA4P22202 642 aaKnown RBP5.44□□□□□ -1.54
CDC43YGL155W VPS34P22543 875 aa5.44□□□□□ -1.54
CDC43YGL155W CLB3P24870 427 aa5.44□□□□□ -1.54
CDC43YGL155W GAC1P28006 793 aa5.44□□□□□ -1.54
CDC43YGL155W PMI40P29952 429 aaKnown RBP5.44□□□□□ -1.54
CDC43YGL155W ATP7P30902 174 aa5.44□□□□□ -1.54
CDC43YGL155W ZIP1P31111 875 aa5.44□□□□□ -1.54
CDC43YGL155W MLF3P32047 452 aa5.44□□□□□ -1.54
CDC43YGL155W SMI1P32566 505 aa5.44□□□□□ -1.54
CDC43YGL155W BEM3P32873 1128 aa5.44□□□□□ -1.54
CDC43YGL155W FLR1P38124 548 aa5.44□□□□□ -1.54
CDC43YGL155W KSP1P38691 1029 aaKnown RBP5.44□□□□□ -1.54
CDC43YGL155W YDR089WP38966 869 aa5.44□□□□□ -1.54
CDC43YGL155W YAT2P40017 923 aa5.44□□□□□ -1.54
CDC43YGL155W SCS2P40075 244 aaKnown RBP5.44□□□□□ -1.54
CDC43YGL155W CHS6P40955 746 aa5.44□□□□□ -1.54
CDC43YGL155W SPR3P41901 512 aa5.44□□□□□ -1.54
CDC43YGL155W YFL012WP43580 148 aa5.44□□□□□ -1.54
CDC43YGL155W UTP8P53276 713 aaKnown RBP5.44□□□□□ -1.54
CDC43YGL155W CUS2P53830 285 aaPredicted RBP5.44□□□□□ -1.54
CDC43YGL155W ASI1P54074 624 aa5.44□□□□□ -1.54
CDC43YGL155W SNU56Q03782 492 aaKnown RBP5.44□□□□□ -1.54
CDC43YGL155W HPT1Q04178 221 aaKnown RBP5.44□□□□□ -1.54
CDC43YGL155W SPC2Q04969 178 aa5.44□□□□□ -1.54
CDC43YGL155W ATG34Q12292 412 aa5.44□□□□□ -1.54
CDC43YGL155W HSH49Q99181 213 aaPredicted RBP5.44□□□□□ -1.54
CDC43YGL155W YPR089WO13585 888 aa5.43□□□□□ -1.54
CDC43YGL155W NMT1P14743 455 aa5.43□□□□□ -1.54
CDC43YGL155W ATP12P22135 325 aa5.43□□□□□ -1.54
CDC43YGL155W CYS3P31373 394 aaKnown RBP5.43□□□□□ -1.54
CDC43YGL155W AGP2P38090 596 aa5.43□□□□□ -1.54
CDC43YGL155W BSD2P38356 321 aa5.43□□□□□ -1.54
CDC43YGL155W HXT5P38695 592 aa5.43□□□□□ -1.54
CDC43YGL155W ARN1P38731 627 aa5.43□□□□□ -1.54
CDC43YGL155W YAP1801P38856 637 aa5.43□□□□□ -1.54
CDC43YGL155W NMD3P38861 518 aaKnown RBP5.43□□□□□ -1.54
CDC43YGL155W YHR182WP38870 785 aa5.43□□□□□ -1.54
CDC43YGL155W SEC31P38968 1273 aaKnown RBP5.43□□□□□ -1.54
CDC43YGL155W MEF2P39677 819 aa5.43□□□□□ -1.54
CDC43YGL155W INP51P40559 946 aaKnown RBP5.43□□□□□ -1.54
CDC43YGL155W GCN20P43535 752 aaKnown RBP5.43□□□□□ -1.54
CDC43YGL155W ALT2P52892 507 aa5.43□□□□□ -1.54
CDC43YGL155W PXR1P53335 271 aaPredicted RBP5.43□□□□□ -1.54
CDC43YGL155W YNL134CP53912 376 aaKnown RBP5.43□□□□□ -1.54
CDC43YGL155W PRO2P54885 456 aaKnown RBP5.43□□□□□ -1.54
CDC43YGL155W TMA20P89886 181 aaPredicted RBP5.43□□□□□ -1.54
CDC43YGL155W ENT5Q03769 411 aaKnown RBP5.43□□□□□ -1.54
CDC43YGL155W GRX8Q05926 109 aa5.43□□□□□ -1.54
CDC43YGL155W SEC10Q06245 871 aa5.43□□□□□ -1.54
CDC43YGL155W DNL4Q08387 944 aaPredicted RBP5.43□□□□□ -1.54
CDC43YGL155W CHS5Q12114 671 aaKnown RBP5.43□□□□□ -1.54
CDC43YGL155W GET4Q12125 312 aa5.43□□□□□ -1.54
CDC43YGL155W LDB17Q12342 491 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms