RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	LAC1	P28496	418 aa		5.02	□□□□□ -1.61
TRP4	YDR354W	RPT3	P33298	428 aa	Known RBP	5.02	□□□□□ -1.61
TRP4	YDR354W	SPC97	P38863	823 aa		5.02	□□□□□ -1.61
TRP4	YDR354W	FUN12	P39730	1002 aa	Known RBP	5.02	□□□□□ -1.61
TRP4	YDR354W	YPR003C	P53394	754 aa		5.02	□□□□□ -1.61
TRP4	YDR354W	RVB2	Q12464	471 aa	Known RBP	5.02	□□□□□ -1.61
TRP4	YDR354W	SCC2	Q04002	1493 aa		5.01	□□□□□ -1.61
TRP4	YDR354W	SEC18	P18759	758 aa	Known RBP	5.01	□□□□□ -1.61
TRP4	YDR354W	MSH1	P25846	959 aa		5.01	□□□□□ -1.61
TRP4	YDR354W	ARP2	P32381	391 aa	Known RBP	5.01	□□□□□ -1.61
TRP4	YDR354W	ORC5	P50874	479 aa		5.01	□□□□□ -1.61
TRP4	YDR354W	CPR6	P53691	371 aa	Known RBP	5.01	□□□□□ -1.61
TRP4	YDR354W	RPL15B	P54780	204 aa	Predicted RBP	5.01	□□□□□ -1.61
TRP4	YDR354W	THI3	Q07471	609 aa		5.01	□□□□□ -1.61
TRP4	YDR354W	ULS1	Q08562	1619 aa		5.01	□□□□□ -1.61
TRP4	YDR354W	YOR1	P53049	1477 aa		5	□□□□□ -1.61
TRP4	YDR354W	TRM732	Q03496	1420 aa		5	□□□□□ -1.61
TRP4	YDR354W	PET122	P10355	254 aa		5	□□□□□ -1.61
TRP4	YDR354W	HES1	P35843	434 aa		5	□□□□□ -1.61
TRP4	YDR354W	IRC8	P47046	822 aa		5	□□□□□ -1.61
TRP4	YDR354W	UBX6	P47049	396 aa		5	□□□□□ -1.61
TRP4	YDR354W	NYV1	Q12255	253 aa		5	□□□□□ -1.61
TRP4	YDR354W	MYO4	P32492	1471 aa		5	□□□□□ -1.61
TRP4	YDR354W	DNA2	P38859	1522 aa		4.99	□□□□□ -1.61
TRP4	YDR354W	ATP4	P05626	244 aa		4.99	□□□□□ -1.61
TRP4	YDR354W	MIS1	P09440	975 aa	Known RBP	4.99	□□□□□ -1.61
TRP4	YDR354W	YEF3	P16521	1044 aa	Known RBP	4.99	□□□□□ -1.61
TRP4	YDR354W	MGM1	P32266	881 aa		4.99	□□□□□ -1.61
TRP4	YDR354W	YBR138C	P38277	524 aa		4.99	□□□□□ -1.61
TRP4	YDR354W	YJL107C	P42947	387 aa		4.99	□□□□□ -1.61
TRP4	YDR354W	YDR109C	Q04585	715 aa		4.99	□□□□□ -1.61
TRP4	YDR354W	MRPL1	Q04599	285 aa		4.99	□□□□□ -1.61
TRP4	YDR354W	STP3	Q05937	343 aa		4.99	□□□□□ -1.61
TRP4	YDR354W	BUD4	P47136	1447 aa		4.98	□□□□□ -1.61
TRP4	YDR354W	YPT1	P01123	206 aa	Known RBP	4.98	□□□□□ -1.61
TRP4	YDR354W	YCP4	P25349	247 aa	Known RBP	4.98	□□□□□ -1.61
TRP4	YDR354W	YHL041W	P38730	149 aa		4.98	□□□□□ -1.61
TRP4	YDR354W	BUD16	P39988	312 aa		4.98	□□□□□ -1.61
TRP4	YDR354W	VPS27	P40343	622 aa	Known RBP	4.98	□□□□□ -1.61
TRP4	YDR354W	CDC1	P40986	491 aa		4.98	□□□□□ -1.61
TRP4	YDR354W	GTB1	Q04924	702 aa		4.98	□□□□□ -1.61
TRP4	YDR354W	RRI1	Q12468	440 aa		4.98	□□□□□ -1.61
TRP4	YDR354W	KOG1	P38873	1557 aa		4.98	□□□□□ -1.61
TRP4	YDR354W	YBT1	P32386	1661 aa		4.97	□□□□□ -1.61
TRP4	YDR354W	AIM17	P23180	465 aa	Known RBP	4.97	□□□□□ -1.61
TRP4	YDR354W	CNA1	P23287	553 aa		4.97	□□□□□ -1.61
TRP4	YDR354W	MSS51	P32335	436 aa		4.97	□□□□□ -1.61
TRP4	YDR354W	SCO2	P38072	301 aa		4.97	□□□□□ -1.61
TRP4	YDR354W	ARN1	P38731	627 aa		4.97	□□□□□ -1.61
TRP4	YDR354W	SKP2	P42843	763 aa		4.97	□□□□□ -1.61
TRP4	YDR354W	IMA1	P53051	589 aa		4.97	□□□□□ -1.61
TRP4	YDR354W	ECM22	Q05958	814 aa	Predicted RBP	4.97	□□□□□ -1.61
TRP4	YDR354W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
TRP4	YDR354W	TY1B-JR2	P47100	1755 aa	Known RBP	4.96	□□□□□ -1.61
TRP4	YDR354W	TY1B-ER2	Q03619	1755 aa		4.96	□□□□□ -1.61
TRP4	YDR354W	TY1B-MR1	Q04214	1755 aa		4.96	□□□□□ -1.61
TRP4	YDR354W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.96	□□□□□ -1.61
TRP4	YDR354W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.96	□□□□□ -1.61
TRP4	YDR354W	TY1B-NL1	Q12112	1755 aa		4.96	□□□□□ -1.61
TRP4	YDR354W	TY1B-GR1	Q12141	1755 aa		4.96	□□□□□ -1.61
TRP4	YDR354W	TY1B-BL	Q12490	1755 aa		4.96	□□□□□ -1.61
TRP4	YDR354W	MDS3	P53094	1487 aa		4.96	□□□□□ -1.62
TRP4	YDR354W	BIK1	P11709	440 aa		4.96	□□□□□ -1.62
TRP4	YDR354W	RFA2	P26754	273 aa	Known RBP	4.96	□□□□□ -1.62
TRP4	YDR354W	GCD7	P32502	381 aa	Predicted RBP	4.96	□□□□□ -1.62
TRP4	YDR354W	GND1	P38720	489 aa	Known RBP	4.96	□□□□□ -1.62
TRP4	YDR354W	PUG1	P40100	303 aa		4.96	□□□□□ -1.62
TRP4	YDR354W	YIR016W	P40572	265 aa		4.96	□□□□□ -1.62
TRP4	YDR354W	ZAP1	P47043	880 aa		4.96	□□□□□ -1.62
TRP4	YDR354W	SCS3	P53012	380 aa		4.96	□□□□□ -1.62
TRP4	YDR354W	MTG1	Q03151	367 aa	Predicted RBP	4.96	□□□□□ -1.62
TRP4	YDR354W	RRP6	Q12149	733 aa	Known RBP	4.96	□□□□□ -1.62
TRP4	YDR354W	YCF1	P39109	1515 aa	Known RBP	4.96	□□□□□ -1.62
TRP4	YDR354W	CLB4	P24871	460 aa		4.95	□□□□□ -1.62
TRP4	YDR354W	FSH1	P38777	243 aa	Known RBP	4.95	□□□□□ -1.62
TRP4	YDR354W	MDV1	P47025	714 aa		4.95	□□□□□ -1.62
TRP4	YDR354W	MSY1	P48527	492 aa		4.95	□□□□□ -1.62
TRP4	YDR354W	YPT11	P48559	417 aa		4.95	□□□□□ -1.62
TRP4	YDR354W	LYS20	P48570	428 aa	Known RBP	4.95	□□□□□ -1.62
TRP4	YDR354W	TDA9	Q04545	1251 aa		4.95	□□□□□ -1.62
TRP4	YDR354W	PDR8	Q06149	701 aa		4.95	□□□□□ -1.62
TRP4	YDR354W	YOL057W	Q08225	711 aa		4.95	□□□□□ -1.62
TRP4	YDR354W	ATX2	Q12067	313 aa		4.95	□□□□□ -1.62
TRP4	YDR354W	RPO31	P04051	1460 aa		4.94	□□□□□ -1.62
TRP4	YDR354W	PDR15	Q04182	1529 aa	Known RBP	4.94	□□□□□ -1.62
TRP4	YDR354W	PXL1	P36166	706 aa		4.94	□□□□□ -1.62
TRP4	YDR354W	TOM71	P38825	639 aa	Known RBP	4.94	□□□□□ -1.62
TRP4	YDR354W	YNL144C	P53907	740 aa		4.94	□□□□□ -1.62
TRP4	YDR354W	ADE16	P54113	591 aa	Known RBP	4.94	□□□□□ -1.62
TRP4	YDR354W	SNQ2	P32568	1501 aa	Known RBP	4.93	□□□□□ -1.62
TRP4	YDR354W	YML003W	P0CF16	290 aa		4.93	□□□□□ -1.62
TRP4	YDR354W	ERR3	P42222	437 aa		4.93	□□□□□ -1.62
TRP4	YDR354W	VTC3	Q02725	835 aa		4.93	□□□□□ -1.62
TRP4	YDR354W	TRS130	Q03660	1102 aa		4.93	□□□□□ -1.62
TRP4	YDR354W	SNA4	Q07549	140 aa		4.93	□□□□□ -1.62
TRP4	YDR354W	ESC1	Q03661	1658 aa	Known RBP	4.92	□□□□□ -1.62
TRP4	YDR354W	TY3B-G	Q99315	1547 aa		4.92	□□□□□ -1.62
TRP4	YDR354W	OCT1	P35999	772 aa		4.92	□□□□□ -1.62
TRP4	YDR354W	RPT2	P40327	437 aa	Known RBP	4.92	□□□□□ -1.62
TRP4	YDR354W	SUI3	P09064	285 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms