RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C CCT8P47079 568 aaKnown RBP4.53□□□□□ -1.69
PRP28YDR243C AIM24P47127 394 aa4.53□□□□□ -1.69
PRP28YDR243C SOL4P53315 255 aa4.53□□□□□ -1.69
PRP28YDR243C YNL040WP53960 456 aaPredicted RBP4.53□□□□□ -1.69
PRP28YDR243C YMR265CQ03508 461 aaKnown RBP4.53□□□□□ -1.69
PRP28YDR243C YLR352WQ06479 807 aa4.53□□□□□ -1.69
PRP28YDR243C RSC58Q07979 502 aa4.53□□□□□ -1.69
PRP28YDR243C NTG2Q08214 380 aa4.53□□□□□ -1.69
PRP28YDR243C HRK1Q08732 759 aaKnown RBP4.53□□□□□ -1.69
PRP28YDR243C RSF2P46974 1380 aa4.52□□□□□ -1.69
PRP28YDR243C DUR1,2P32528 1835 aaKnown RBP4.52□□□□□ -1.69
PRP28YDR243C TRP3P00937 484 aa4.52□□□□□ -1.69
PRP28YDR243C MF(ALPHA)1P01149 165 aa4.52□□□□□ -1.69
PRP28YDR243C HMG2P12684 1045 aa4.52□□□□□ -1.69
PRP28YDR243C GAL3P13045 520 aa4.52□□□□□ -1.69
PRP28YDR243C RAD4P14736 754 aa4.52□□□□□ -1.69
PRP28YDR243C POL3P15436 1097 aa4.52□□□□□ -1.69
PRP28YDR243C SEC1P30619 724 aaKnown RBP4.52□□□□□ -1.69
PRP28YDR243C PMT2P31382 759 aa4.52□□□□□ -1.69
PRP28YDR243C GCG1P32656 232 aaKnown RBP4.52□□□□□ -1.69
PRP28YDR243C ORC2P32833 620 aa4.52□□□□□ -1.69
PRP28YDR243C CAF4P36130 643 aa4.52□□□□□ -1.69
PRP28YDR243C UTP30P36144 274 aaKnown RBP4.52□□□□□ -1.69
PRP28YDR243C MRPL16P38064 232 aa4.52□□□□□ -1.69
PRP28YDR243C SEA4P38164 1038 aa4.52□□□□□ -1.69
PRP28YDR243C FUI1P38196 639 aa4.52□□□□□ -1.69
PRP28YDR243C RFT1P38206 574 aaPredicted RBP4.52□□□□□ -1.69
PRP28YDR243C HSE1P38753 452 aa4.52□□□□□ -1.69
PRP28YDR243C UTP9P38882 575 aaKnown RBP4.52□□□□□ -1.69
PRP28YDR243C POP2P39008 433 aa4.52□□□□□ -1.69
PRP28YDR243C SEN34P39707 275 aa4.52□□□□□ -1.69
PRP28YDR243C SSP120P39931 234 aaKnown RBP4.52□□□□□ -1.69
PRP28YDR243C THO1P40040 218 aaKnown RBP4.52□□□□□ -1.69
PRP28YDR243C CAF40P53829 373 aa4.52□□□□□ -1.69
PRP28YDR243C RPL6AQ02326 176 aaKnown RBP4.52□□□□□ -1.69
PRP28YDR243C SSY1Q03770 852 aa4.52□□□□□ -1.69
PRP28YDR243C KAR5Q04746 504 aa4.52□□□□□ -1.69
PRP28YDR243C YFT2Q06676 274 aa4.52□□□□□ -1.69
PRP28YDR243C WHI4Q07655 649 aaKnown RBP4.52□□□□□ -1.69
PRP28YDR243C SKI7Q08491 747 aaPredicted RBP4.52□□□□□ -1.69
PRP28YDR243C THI72Q08579 599 aa4.52□□□□□ -1.69
PRP28YDR243C RAX1Q08760 435 aa4.52□□□□□ -1.69
PRP28YDR243C RCN2Q12044 265 aa4.52□□□□□ -1.69
PRP28YDR243C YCL001W-BQ96VH2 84 aa4.52□□□□□ -1.69
PRP28YDR243C IML1P47170 1584 aa4.51□□□□□ -1.69
PRP28YDR243C TRP2P00899 507 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C FUR4P05316 633 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C GFA1P14742 717 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C RIT1P23796 513 aa4.51□□□□□ -1.69
PRP28YDR243C VMA16P23968 213 aa4.51□□□□□ -1.69
PRP28YDR243C ILV6P25605 309 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C CPR3P25719 182 aa4.51□□□□□ -1.69
PRP28YDR243C TFC1P32367 649 aa4.51□□□□□ -1.69
PRP28YDR243C GCD7P32502 381 aaPredicted RBP4.51□□□□□ -1.69
PRP28YDR243C NIC96P34077 839 aa4.51□□□□□ -1.69
PRP28YDR243C SCD5P34758 872 aa4.51□□□□□ -1.69
PRP28YDR243C TAF14P35189 244 aa4.51□□□□□ -1.69
PRP28YDR243C MRPL37P36532 105 aa4.51□□□□□ -1.69
PRP28YDR243C YER184CP39961 794 aa4.51□□□□□ -1.69
PRP28YDR243C ENT3P47160 408 aa4.51□□□□□ -1.69
PRP28YDR243C YKE2P52553 114 aa4.51□□□□□ -1.69
PRP28YDR243C TAF6P53040 516 aa4.51□□□□□ -1.69
PRP28YDR243C YGL117WP53133 265 aa4.51□□□□□ -1.69
PRP28YDR243C DAM1P53267 343 aa4.51□□□□□ -1.69
PRP28YDR243C YGR125WP53273 1036 aa4.51□□□□□ -1.69
PRP28YDR243C DBP6P53734 629 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C ORC3P54790 616 aa4.51□□□□□ -1.69
PRP28YDR243C BUL2Q03758 920 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C YDR131CQ03899 556 aa4.51□□□□□ -1.69
PRP28YDR243C RAD30Q04049 632 aa4.51□□□□□ -1.69
PRP28YDR243C GFD1Q04839 188 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C YDR286CQ05530 114 aa4.51□□□□□ -1.69
PRP28YDR243C MHR1Q06630 226 aa4.51□□□□□ -1.69
PRP28YDR243C SYT1Q06836 1226 aa4.51□□□□□ -1.69
PRP28YDR243C DSE3Q08729 430 aa4.51□□□□□ -1.69
PRP28YDR243C MSC6Q08818 692 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C OSW2Q12202 724 aa4.51□□□□□ -1.69
PRP28YDR243C TRM11Q12463 433 aa4.51□□□□□ -1.69
PRP28YDR243C TY1B-JR2P47100 1755 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C TY1B-ER2Q03619 1755 aa4.51□□□□□ -1.69
PRP28YDR243C TY1B-MR1Q04214 1755 aa4.51□□□□□ -1.69
PRP28YDR243C TY1B-MR2Q04670 1755 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C TY1B-LR1Q12088 1755 aaKnown RBP4.51□□□□□ -1.69
PRP28YDR243C TY1B-NL1Q12112 1755 aa4.51□□□□□ -1.69
PRP28YDR243C TY1B-GR1Q12141 1755 aa4.51□□□□□ -1.69
PRP28YDR243C TY1B-BLQ12490 1755 aa4.51□□□□□ -1.69
PRP28YDR243C YBT1P32386 1661 aa4.51□□□□□ -1.69
PRP28YDR243C GPM1P00950 247 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C RPC40P07703 335 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C TUB3P09734 445 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C NSP1P14907 823 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C OM45P16547 393 aa4.5□□□□□ -1.69
PRP28YDR243C SRV2P17555 526 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C SEC18P18759 758 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C PRI2P20457 528 aa4.5□□□□□ -1.69
PRP28YDR243C ATG22P25568 528 aa4.5□□□□□ -1.69
PRP28YDR243C NAM7P30771 971 aaKnown RBP4.5□□□□□ -1.69
PRP28YDR243C VAM7P32912 316 aa4.5□□□□□ -1.69
PRP28YDR243C YKL100CP34248 587 aa4.5□□□□□ -1.69
PRP28YDR243C MRPL7P36519 292 aa4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms