RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W HCA4P20448 770 aaKnown RBP2.79□□□□□ -1.96
VPS41YDR080W PRP22P24384 1145 aaKnown RBP2.79□□□□□ -1.96
VPS41YDR080W RSA4P25382 515 aaKnown RBP2.79□□□□□ -1.96
VPS41YDR080W CSE1P33307 960 aa2.79□□□□□ -1.96
VPS41YDR080W BDH2P39713 417 aa2.79□□□□□ -1.96
VPS41YDR080W OSW7P43611 510 aa2.79□□□□□ -1.96
VPS41YDR080W NUP84P52891 726 aa2.79□□□□□ -1.96
VPS41YDR080W STP4Q07351 490 aa2.79□□□□□ -1.96
VPS41YDR080W PKH2Q12236 1081 aaKnown RBP2.79□□□□□ -1.96
VPS41YDR080W SKG6P32900 734 aaPredicted RBP2.79□□□□□ -1.96
VPS41YDR080W CDS1P38221 457 aa2.79□□□□□ -1.96
VPS41YDR080W BUD8P41698 603 aa2.79□□□□□ -1.96
VPS41YDR080W TAM41P53230 385 aa2.79□□□□□ -1.96
VPS41YDR080W RPS14AP06367 137 aaKnown RBP2.79□□□□□ -1.96
VPS41YDR080W CSE2P33308 149 aa2.79□□□□□ -1.96
VPS41YDR080W OPY1P38271 328 aa2.79□□□□□ -1.96
VPS41YDR080W GAA1P39012 614 aa2.79□□□□□ -1.96
VPS41YDR080W RPS14BP39516 138 aaKnown RBP2.79□□□□□ -1.96
VPS41YDR080W YER186CP40101 306 aa2.79□□□□□ -1.96
VPS41YDR080W MPS3P47069 682 aa2.79□□□□□ -1.96
VPS41YDR080W YJR142WP47173 342 aa2.79□□□□□ -1.96
VPS41YDR080W ECM9Q02202 377 aa2.79□□□□□ -1.96
VPS41YDR080W CHS5Q12114 671 aaKnown RBP2.79□□□□□ -1.96
VPS41YDR080W LAA1P39526 2014 aa2.78□□□□□ -1.96
VPS41YDR080W RPS21AP0C0V8 87 aaKnown RBP2.78□□□□□ -1.96
VPS41YDR080W CLN3P13365 580 aa2.78□□□□□ -1.96
VPS41YDR080W CDC26P14724 124 aa2.78□□□□□ -1.96
VPS41YDR080W FRS1P15624 595 aaKnown RBP2.78□□□□□ -1.96
VPS41YDR080W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
VPS41YDR080W PEX34P25584 144 aa2.78□□□□□ -1.96
VPS41YDR080W YMC2P38087 329 aa2.78□□□□□ -1.96
VPS41YDR080W FAT1P38225 669 aa2.78□□□□□ -1.96
VPS41YDR080W DOT6P40059 670 aaKnown RBP2.78□□□□□ -1.96
VPS41YDR080W CCT5P40413 562 aaKnown RBP2.78□□□□□ -1.96
VPS41YDR080W YGR151CP53287 111 aa2.78□□□□□ -1.96
VPS41YDR080W IMP4P53941 290 aaKnown RBP2.78□□□□□ -1.96
VPS41YDR080W SLG1P54867 378 aa2.78□□□□□ -1.96
VPS41YDR080W FUS2Q05670 677 aa2.78□□□□□ -1.96
VPS41YDR080W YFT2Q06676 274 aa2.78□□□□□ -1.96
VPS41YDR080W POM34Q12445 299 aa2.78□□□□□ -1.96
VPS41YDR080W YOR111WQ99210 232 aa2.78□□□□□ -1.96
VPS41YDR080W PHO5P00635 467 aa2.78□□□□□ -1.96
VPS41YDR080W GFA1P14742 717 aaKnown RBP2.78□□□□□ -1.96
VPS41YDR080W PPG1P32838 368 aa2.78□□□□□ -1.96
VPS41YDR080W PPZ2P33329 710 aa2.78□□□□□ -1.96
VPS41YDR080W GLG1P36143 616 aa2.78□□□□□ -1.96
VPS41YDR080W SHE10P53075 577 aa2.78□□□□□ -1.96
VPS41YDR080W YGL138CP53122 345 aa2.78□□□□□ -1.96
VPS41YDR080W MNP1P53163 194 aaPredicted RBP2.78□□□□□ -1.96
VPS41YDR080W RET3P53600 189 aa2.78□□□□□ -1.96
VPS41YDR080W BNI5P53890 448 aaKnown RBP2.78□□□□□ -1.96
VPS41YDR080W CUR1Q06469 252 aa2.78□□□□□ -1.96
VPS41YDR080W RIM20Q12033 661 aa2.78□□□□□ -1.96
VPS41YDR080W APM4Q99186 491 aa2.78□□□□□ -1.96
VPS41YDR080W MTF1P14908 341 aaKnown RBP2.77□□□□□ -1.97
VPS41YDR080W MCM3P24279 971 aaKnown RBP2.77□□□□□ -1.97
VPS41YDR080W PEP3P27801 918 aa2.77□□□□□ -1.97
VPS41YDR080W GCS1P35197 352 aa2.77□□□□□ -1.97
VPS41YDR080W APT2P36973 181 aa2.77□□□□□ -1.97
VPS41YDR080W AAP1P37898 856 aaKnown RBP2.77□□□□□ -1.97
VPS41YDR080W YEL020CP39994 560 aa2.77□□□□□ -1.97
VPS41YDR080W YIL077CP40508 320 aa2.77□□□□□ -1.97
VPS41YDR080W CUL3P53202 744 aa2.77□□□□□ -1.97
VPS41YDR080W COX18P53239 316 aa2.77□□□□□ -1.97
VPS41YDR080W SDA1P53313 767 aaKnown RBP2.77□□□□□ -1.97
VPS41YDR080W MTQ2Q03920 221 aaPredicted RBP2.77□□□□□ -1.97
VPS41YDR080W CSM3Q04659 317 aa2.77□□□□□ -1.97
VPS41YDR080W THI73Q07904 523 aa2.77□□□□□ -1.97
VPS41YDR080W CEX1Q12453 761 aa2.77□□□□□ -1.97
VPS41YDR080W TOR1P35169 2470 aa2.77□□□□□ -1.97
VPS41YDR080W COX4P04037 155 aa2.77□□□□□ -1.97
VPS41YDR080W MAS1P10507 462 aa2.77□□□□□ -1.97
VPS41YDR080W FPR1P20081 114 aaKnown RBP2.77□□□□□ -1.97
VPS41YDR080W PRP28P23394 588 aa2.77□□□□□ -1.97
VPS41YDR080W GPI10P30777 616 aa2.77□□□□□ -1.97
VPS41YDR080W PET127P32606 800 aa2.77□□□□□ -1.97
VPS41YDR080W MTC7P32633 139 aa2.77□□□□□ -1.97
VPS41YDR080W COT1P32798 439 aa2.77□□□□□ -1.97
VPS41YDR080W KDX1P36005 433 aa2.77□□□□□ -1.97
VPS41YDR080W HEL1P36113 551 aa2.77□□□□□ -1.97
VPS41YDR080W CKB2P38930 258 aa2.77□□□□□ -1.97
VPS41YDR080W YIL166CP40445 542 aa2.77□□□□□ -1.97
VPS41YDR080W IES1P43579 692 aa2.77□□□□□ -1.97
VPS41YDR080W RET2P43621 546 aa2.77□□□□□ -1.97
VPS41YDR080W VPS25P47142 202 aa2.77□□□□□ -1.97
VPS41YDR080W NOP13P53883 403 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
VPS41YDR080W YHM2Q04013 314 aa2.77□□□□□ -1.97
VPS41YDR080W TEL1P38110 2787 aa2.76□□□□□ -1.97
VPS41YDR080W GAL80P04387 435 aa2.76□□□□□ -1.97
VPS41YDR080W BMH2P34730 273 aaKnown RBP2.76□□□□□ -1.97
VPS41YDR080W CTP1P38152 299 aa2.76□□□□□ -1.97
VPS41YDR080W COS111P38308 924 aa2.76□□□□□ -1.97
VPS41YDR080W ARG2P40360 574 aa2.76□□□□□ -1.97
VPS41YDR080W SAD1P43589 448 aa2.76□□□□□ -1.97
VPS41YDR080W FYV8P46949 817 aaKnown RBP2.76□□□□□ -1.97
VPS41YDR080W NOP15P53927 220 aaPredicted RBP2.76□□□□□ -1.97
VPS41YDR080W IZH3Q07959 543 aa2.76□□□□□ -1.97
VPS41YDR080W VHS3Q08438 674 aa2.76□□□□□ -1.97
VPS41YDR080W PRE4P30657 266 aa2.76□□□□□ -1.97
VPS41YDR080W DUG2P38149 878 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 118 ms