RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C URA7P28274 579 aaKnown RBP5.77□□□□□ -1.49
PDB1YBR221C MLF3P32047 452 aa5.77□□□□□ -1.49
PDB1YBR221C MSN4P33749 630 aa5.77□□□□□ -1.49
PDB1YBR221C RFC3P38629 340 aa5.77□□□□□ -1.49
PDB1YBR221C STN1P38960 494 aa5.77□□□□□ -1.49
PDB1YBR221C FLC2P39719 783 aa5.77□□□□□ -1.49
PDB1YBR221C MTW1P39731 289 aa5.77□□□□□ -1.49
PDB1YBR221C AAD14P42884 376 aa5.77□□□□□ -1.49
PDB1YBR221C GSM1P42950 618 aa5.77□□□□□ -1.49
PDB1YBR221C NIT3P49954 291 aa5.77□□□□□ -1.49
PDB1YBR221C UBC9P50623 157 aaPredicted RBP5.77□□□□□ -1.49
PDB1YBR221C MTC3P53077 123 aa5.77□□□□□ -1.49
PDB1YBR221C GPD1Q00055 391 aaKnown RBP5.77□□□□□ -1.49
PDB1YBR221C SMA1Q02651 245 aa5.77□□□□□ -1.49
PDB1YBR221C RTN1Q04947 295 aaKnown RBP5.77□□□□□ -1.49
PDB1YBR221C MSC3Q05812 728 aa5.77□□□□□ -1.49
PDB1YBR221C ECM7Q06200 448 aa5.77□□□□□ -1.49
PDB1YBR221C IWR1Q07532 353 aaPredicted RBP5.77□□□□□ -1.49
PDB1YBR221C GNT1Q12096 491 aa5.77□□□□□ -1.49
PDB1YBR221C UTP10P42945 1769 aaKnown RBP5.76□□□□□ -1.49
PDB1YBR221C JIP3O13555 125 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-DR4O74302 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-HP0C2I4 478 aaKnown RBP5.76□□□□□ -1.49
PDB1YBR221C TY1A-AP0CX57 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-PR1P0CX58 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-ORP0CX59 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-PR2P0CX60 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-DR5P0CX65 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-ER2P0CX66 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-GR3P0CX67 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-LR1P0CX68 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-MR2P0CX69 440 aa5.76□□□□□ -1.49
PDB1YBR221C EST1P17214 699 aaPredicted RBP5.76□□□□□ -1.49
PDB1YBR221C ACO1P19414 778 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
PDB1YBR221C BOS1P25385 244 aa5.76□□□□□ -1.49
PDB1YBR221C TRK2P28584 889 aa5.76□□□□□ -1.49
PDB1YBR221C GDT1P38301 280 aaPredicted RBP5.76□□□□□ -1.49
PDB1YBR221C NTC20P38302 140 aaPredicted RBP5.76□□□□□ -1.49
PDB1YBR221C SRP68P38687 599 aaKnown RBP5.76□□□□□ -1.49
PDB1YBR221C SIP3P38717 1229 aa5.76□□□□□ -1.49
PDB1YBR221C SPL2P38839 148 aa5.76□□□□□ -1.49
PDB1YBR221C SMF1P38925 575 aa5.76□□□□□ -1.49
PDB1YBR221C PSD1P39006 500 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-JR2P47099 440 aa5.76□□□□□ -1.49
PDB1YBR221C PSP1P50896 841 aaKnown RBP5.76□□□□□ -1.49
PDB1YBR221C MCM6P53091 1017 aaKnown RBP5.76□□□□□ -1.49
PDB1YBR221C RPT4P53549 437 aaKnown RBP5.76□□□□□ -1.49
PDB1YBR221C YSA1Q01976 231 aa5.76□□□□□ -1.49
PDB1YBR221C MTD1Q02046 320 aaKnown RBP5.76□□□□□ -1.49
PDB1YBR221C TY1A-DR1Q03856 440 aa5.76□□□□□ -1.49
PDB1YBR221C SEG1Q04279 960 aa5.76□□□□□ -1.49
PDB1YBR221C MRPL1Q04599 285 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-ML1Q04706 440 aaKnown RBP5.76□□□□□ -1.49
PDB1YBR221C BOP2Q06150 570 aa5.76□□□□□ -1.49
PDB1YBR221C SKG3Q06315 1026 aa5.76□□□□□ -1.49
PDB1YBR221C BCP1Q06338 283 aa5.76□□□□□ -1.49
PDB1YBR221C ARR2Q06597 130 aa5.76□□□□□ -1.49
PDB1YBR221C YLR413WQ06689 675 aa5.76□□□□□ -1.49
PDB1YBR221C LOT6Q07923 191 aa5.76□□□□□ -1.49
PDB1YBR221C CIR2Q08822 631 aa5.76□□□□□ -1.49
PDB1YBR221C TCO89Q08921 799 aa5.76□□□□□ -1.49
PDB1YBR221C NMD4Q12129 218 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-BRQ12217 440 aa5.76□□□□□ -1.49
PDB1YBR221C BMT6Q12291 365 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-NL2Q12470 440 aa5.76□□□□□ -1.49
PDB1YBR221C TY1A-GR2Q12485 440 aa5.76□□□□□ -1.49
PDB1YBR221C RPS9AO13516 197 aaKnown RBP5.75□□□□□ -1.49
PDB1YBR221C CDC42P19073 191 aa5.75□□□□□ -1.49
PDB1YBR221C SIR1P21691 654 aa5.75□□□□□ -1.49
PDB1YBR221C EMC1P25574 760 aa5.75□□□□□ -1.49
PDB1YBR221C COT1P32798 439 aa5.75□□□□□ -1.49
PDB1YBR221C YKL077WP36081 392 aa5.75□□□□□ -1.49
PDB1YBR221C YBL029WP38201 376 aa5.75□□□□□ -1.49
PDB1YBR221C RGD1P38339 666 aa5.75□□□□□ -1.49
PDB1YBR221C LIN1P38852 340 aaPredicted RBP5.75□□□□□ -1.49
PDB1YBR221C SSP120P39931 234 aaKnown RBP5.75□□□□□ -1.49
PDB1YBR221C MET18P40469 1032 aa5.75□□□□□ -1.49
PDB1YBR221C YRB2P40517 327 aa5.75□□□□□ -1.49
PDB1YBR221C ULP2P40537 1034 aaPredicted RBP5.75□□□□□ -1.49
PDB1YBR221C ALT2P52892 507 aa5.75□□□□□ -1.49
PDB1YBR221C CUE3P53137 624 aaKnown RBP5.75□□□□□ -1.49
PDB1YBR221C DCP2P53550 970 aaKnown RBP5.75□□□□□ -1.49
PDB1YBR221C RET3P53600 189 aa5.75□□□□□ -1.49
PDB1YBR221C RRP17Q04031 235 aaPredicted RBP5.75□□□□□ -1.49
PDB1YBR221C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
PDB1YBR221C ENV7Q12003 364 aa5.75□□□□□ -1.49
PDB1YBR221C FLO11P08640 1367 aa5.75□□□□□ -1.49
PDB1YBR221C RPL6BP05739 176 aaKnown RBP5.74□□□□□ -1.49
PDB1YBR221C STE12P13574 688 aa5.74□□□□□ -1.49
PDB1YBR221C CBS1P14066 229 aa5.74□□□□□ -1.49
PDB1YBR221C RPI1P23250 407 aaKnown RBP5.74□□□□□ -1.49
PDB1YBR221C CAP1P28495 268 aaKnown RBP5.74□□□□□ -1.49
PDB1YBR221C PAP1P29468 568 aaKnown RBP5.74□□□□□ -1.49
PDB1YBR221C CYS3P31373 394 aaKnown RBP5.74□□□□□ -1.49
PDB1YBR221C ADD66P36040 267 aa5.74□□□□□ -1.49
PDB1YBR221C GLG1P36143 616 aa5.74□□□□□ -1.49
PDB1YBR221C EXO5P38289 585 aa5.74□□□□□ -1.49
PDB1YBR221C MSC7P38694 644 aa5.74□□□□□ -1.49
PDB1YBR221C WSS1P38838 269 aa5.74□□□□□ -1.49
PDB1YBR221C MNL1P38888 796 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms