RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ZBTB16Q05516 673 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 OSBPL3Q9H4L5 887 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 ODF2LQ9ULJ1 636 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 CCDC144AA2RUR9 1427 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 C4BPBP20851 252 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 CLCN6P51797 869 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 FMR1NBQ8N0W7 255 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 HPS5Q9UPZ3 1129 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 HNRNPCL1O60812 293 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 CSRNP2Q9H175 543 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 VPS18Q9P253 973 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 MKRN4PQ13434 485 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 PLA2G4DQ86XP0 818 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 DHX58Q96C10 678 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 THOC1Q96FV9 657 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 CCDC42Q96M95 316 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 ZCWPW1Q9H0M4 648 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 C10orf88Q9H8K7 445 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 TOB1P50616 345 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 SNX16P57768 344 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 FAM47AQ5JRC9 791 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 FBXO18Q8NFZ0 1043 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 TBC1D22AQ8WUA7 517 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 IFT81Q8WYA0 676 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 POLR2DO15514 142 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 MCMDC2Q4G0Z9 681 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 APBB1IPQ7Z5R6 666 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 TSKSQ9UJT2 592 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 NMT2O60551 498 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 LRRC41Q15345 812 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 GPR101Q96P66 508 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 GUCA1BQ9UMX6 200 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 SPTLC2O15270 562 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 SPDL1Q96EA4 605 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 DPYDQ12882 1025 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 CCDC93Q567U6 631 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 SHC4Q6S5L8 630 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 SEPT8Q92599 483 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 KCNB2Q92953 911 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 CCDC51Q96ER9 411 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 MS4A14Q96JA4 679 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 SLC4A4Q9Y6R1 1079 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 TSPY2A6NKD2 308 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 TSPY3P0CV98 308 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 TSPY8P0CW00 308 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 TSPY1Q01534 308 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 NCAPHQ15003 741 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 NOA1Q8NC60 698 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 SEPT3Q9UH03 358 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 NDUFAB1O14561 156 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 RNF40O75150 1001 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 NLRP12P59046 1061 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 IL17AQ16552 155 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 GSPT2Q8IYD1 628 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 HVCN1Q96D96 273 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 GNL3LQ9NVN8 582 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 A0A1W2PRG0 241 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 KLHL14Q9P2G3 628 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 MXRA7P84157 204 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 CCZ1BP86790 482 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 CCZ1P86791 482 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 CFAP221Q4G0U5 840 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 ARMT1Q9H993 441 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 NCAPD3P42695 1498 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 TATP17735 454 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 RWDD2BP57060 319 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 HLFQ16534 295 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 CCDC178Q5BJE1 867 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 C6orf118Q5T5N4 469 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 RALYLQ86SE5 291 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 ENGASEQ8NFI3 743 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 NAP1L4Q99733 375 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 PFKFB2O60825 505 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 ANTXR2P58335 489 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 DYNLL1P63167 89 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 SMCR8Q8TEV9 937 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 HAUS1Q96CS2 278 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 DAPK1P53355 1430 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 IPO5O00410 1097 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 NKRFO15226 690 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEB-220ENST00000618972 UBE4AQ14139 1066 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 SEPT2Q15019 361 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 RAD9BQ6WBX8 426 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 OSCARQ8IYS5 282 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 KCNG4Q8TDN1 519 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 SOWAHDA6NJG2 315 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 CYP21A2P08686 494 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 KCNA6P17658 529 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 ENAHQ8N8S7 591 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 TBC1D5Q92609 795 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 C8orf76Q96K31 380 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 BZW2Q9Y6E2 419 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 KRT40Q6A162 431 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 FAM43BQ6ZT52 329 aaPredicted RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 KRT28Q7Z3Y7 464 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 RASGRP4Q8TDF6 673 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 SYNPO2Q9UMS6 1093 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 MRPL11Q9Y3B7 192 aaKnown RBP3.42□□□□□ -1.86
NEB-220ENST00000618972 BRAPQ7Z569 592 aa3.42□□□□□ -1.86
NEB-220ENST00000618972 PAGE5Q96GU1 130 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms